Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 RPL23AP25-201ENST00000430973 463 ntBASIC4.71□□□□□ -1.66
HMGB1P1B2RPK0 VN1R54P-201ENST00000435210 1049 ntBASIC4.71□□□□□ -1.66
HMGB1P1B2RPK0 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC4.71□□□□□ -1.66
HMGB1P1B2RPK0 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.71□□□□□ -1.66
HMGB1P1B2RPK0 AC064862.4-201ENST00000442180 334 ntBASIC4.71□□□□□ -1.66
HMGB1P1B2RPK0 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.71□□□□□ -1.66
HMGB1P1B2RPK0 AC097484.1-201ENST00000471148 389 ntBASIC4.71□□□□□ -1.66
HMGB1P1B2RPK0 AC090114.3-201ENST00000479267 829 ntBASIC4.71□□□□□ -1.66
HMGB1P1B2RPK0 RN7SL547P-201ENST00000490793 290 ntBASIC4.71□□□□□ -1.66
HMGB1P1B2RPK0 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC4.71□□□□□ -1.66
HMGB1P1B2RPK0 AC026414.1-201ENST00000504046 698 ntBASIC4.71□□□□□ -1.66
HMGB1P1B2RPK0 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.71□□□□□ -1.66
HMGB1P1B2RPK0 RN7SKP276-201ENST00000516242 268 ntBASIC4.71□□□□□ -1.66
HMGB1P1B2RPK0 AC011853.1-201ENST00000518911 454 ntBASIC4.71□□□□□ -1.66
HMGB1P1B2RPK0 IGKV2-4-201ENST00000523070 340 ntBASIC4.71□□□□□ -1.66
HMGB1P1B2RPK0 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.71□□□□□ -1.66
HMGB1P1B2RPK0 OR5M7P-201ENST00000526140 972 ntBASIC4.71□□□□□ -1.66
HMGB1P1B2RPK0 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC4.71□□□□□ -1.66
HMGB1P1B2RPK0 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC4.71□□□□□ -1.66
HMGB1P1B2RPK0 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.71□□□□□ -1.66
HMGB1P1B2RPK0 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
HMGB1P1B2RPK0 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HMGB1P1B2RPK0 AC020978.7-201ENST00000575953 1187 ntBASIC4.71□□□□□ -1.66
HMGB1P1B2RPK0 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC4.71□□□□□ -1.66
HMGB1P1B2RPK0 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC4.71□□□□□ -1.66
HMGB1P1B2RPK0 AC023762.1-201ENST00000603280 584 ntBASIC4.71□□□□□ -1.66
HMGB1P1B2RPK0 AP001330.4-201ENST00000604350 154 ntBASIC4.71□□□□□ -1.66
HMGB1P1B2RPK0 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.71□□□□□ -1.66
HMGB1P1B2RPK0 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC4.71□□□□□ -1.66
HMGB1P1B2RPK0 AC108865.2-201ENST00000606881 432 ntBASIC4.71□□□□□ -1.66
HMGB1P1B2RPK0 AP002360.3-201ENST00000607673 710 ntBASIC4.71□□□□□ -1.66
HMGB1P1B2RPK0 AL031666.3-201ENST00000609320 1006 ntBASIC4.71□□□□□ -1.66
HMGB1P1B2RPK0 AC092574.1-201ENST00000609771 420 ntBASIC4.71□□□□□ -1.66
HMGB1P1B2RPK0 AC109309.2-201ENST00000612597 332 ntBASIC4.71□□□□□ -1.66
HMGB1P1B2RPK0 PLCE1P1-201ENST00000622094 305 ntBASIC4.71□□□□□ -1.66
HMGB1P1B2RPK0 AC091925.2-201ENST00000625059 256 ntBASIC4.71□□□□□ -1.66
HMGB1P1B2RPK0 MAPK10-372ENST00000641954 3413 ntBASIC4.71□□□□□ -1.66
HMGB1P1B2RPK0 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HMGB1P1B2RPK0 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HMGB1P1B2RPK0 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC4.71□□□□□ -1.66
HMGB1P1B2RPK0 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.71□□□□□ -1.66
HMGB1P1B2RPK0 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HMGB1P1B2RPK0 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HMGB1P1B2RPK0 AL365440.1-201ENST00000436135 2167 ntBASIC4.7□□□□□ -1.66
HMGB1P1B2RPK0 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.7□□□□□ -1.66
HMGB1P1B2RPK0 RNU1-15P-201ENST00000353977 144 ntBASIC4.7□□□□□ -1.66
HMGB1P1B2RPK0 RN7SKP115-201ENST00000363177 317 ntBASIC4.7□□□□□ -1.66
HMGB1P1B2RPK0 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
HMGB1P1B2RPK0 RNU6-1074P-201ENST00000383995 104 ntBASIC4.7□□□□□ -1.66
HMGB1P1B2RPK0 AL035405.1-201ENST00000400795 710 ntBASIC4.7□□□□□ -1.66
HMGB1P1B2RPK0 AL645608.4-201ENST00000423619 154 ntBASIC4.7□□□□□ -1.66
HMGB1P1B2RPK0 AC017083.1-201ENST00000428093 483 ntBASIC4.7□□□□□ -1.66
HMGB1P1B2RPK0 SEPT7P5-201ENST00000434048 306 ntBASIC4.7□□□□□ -1.66
HMGB1P1B2RPK0 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.7□□□□□ -1.66
HMGB1P1B2RPK0 RPL34P20-201ENST00000442771 351 ntBASIC4.7□□□□□ -1.66
HMGB1P1B2RPK0 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC4.7□□□□□ -1.66
HMGB1P1B2RPK0 AL451050.1-201ENST00000450126 415 ntBASIC4.7□□□□□ -1.66
HMGB1P1B2RPK0 SLC31A1P1-201ENST00000451221 567 ntBASIC4.7□□□□□ -1.66
HMGB1P1B2RPK0 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.7□□□□□ -1.66
HMGB1P1B2RPK0 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC4.7□□□□□ -1.66
HMGB1P1B2RPK0 RN7SL222P-201ENST00000476452 299 ntBASIC4.7□□□□□ -1.66
HMGB1P1B2RPK0 RN7SL244P-201ENST00000493405 297 ntBASIC4.7□□□□□ -1.66
HMGB1P1B2RPK0 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC4.7□□□□□ -1.66
HMGB1P1B2RPK0 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HMGB1P1B2RPK0 PARP4P3-201ENST00000510265 317 ntBASIC4.7□□□□□ -1.66
HMGB1P1B2RPK0 SCARNA21.2-201ENST00000516600 166 ntBASIC4.7□□□□□ -1.66
HMGB1P1B2RPK0 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.7□□□□□ -1.66
HMGB1P1B2RPK0 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4.7□□□□□ -1.66
HMGB1P1B2RPK0 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC4.7□□□□□ -1.66
HMGB1P1B2RPK0 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.7□□□□□ -1.66
HMGB1P1B2RPK0 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.7□□□□□ -1.66
HMGB1P1B2RPK0 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.7□□□□□ -1.66
HMGB1P1B2RPK0 AC010201.1-201ENST00000605051 540 ntBASIC4.7□□□□□ -1.66
HMGB1P1B2RPK0 AC011816.2-201ENST00000607089 556 ntBASIC4.7□□□□□ -1.66
HMGB1P1B2RPK0 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.7□□□□□ -1.66
HMGB1P1B2RPK0 AL592148.2-201ENST00000612210 372 ntBASIC4.7□□□□□ -1.66
HMGB1P1B2RPK0 HTR1DP1-201ENST00000616500 888 ntBASIC4.7□□□□□ -1.66
HMGB1P1B2RPK0 XIST_intron.1-201ENST00000619444 68 ntBASIC4.7□□□□□ -1.66
HMGB1P1B2RPK0 AC006249.1-201ENST00000621223 471 ntBASIC4.7□□□□□ -1.66
HMGB1P1B2RPK0 AC095031.1-201ENST00000623685 672 ntBASIC4.7□□□□□ -1.66
HMGB1P1B2RPK0 AL691477.1-201ENST00000624398 162 ntBASIC4.7□□□□□ -1.66
HMGB1P1B2RPK0 AC126544.2-201ENST00000625174 749 ntBASIC4.7□□□□□ -1.66
HMGB1P1B2RPK0 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC4.7□□□□□ -1.66
HMGB1P1B2RPK0 CASC19-261ENST00000641853 1638 ntBASIC4.7□□□□□ -1.66
HMGB1P1B2RPK0 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HMGB1P1B2RPK0 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.7□□□□□ -1.66
HMGB1P1B2RPK0 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HMGB1P1B2RPK0 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.7□□□□□ -1.66
HMGB1P1B2RPK0 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.7□□□□□ -1.66
HMGB1P1B2RPK0 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HMGB1P1B2RPK0 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HMGB1P1B2RPK0 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
HMGB1P1B2RPK0 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.7□□□□□ -1.66
HMGB1P1B2RPK0 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
HMGB1P1B2RPK0 Z99496.1-201ENST00000469424 1477 ntBASIC4.69□□□□□ -1.66
HMGB1P1B2RPK0 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.69□□□□□ -1.66
HMGB1P1B2RPK0 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HMGB1P1B2RPK0 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
HMGB1P1B2RPK0 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
HMGB1P1B2RPK0 RNA5SP513-201ENST00000364648 118 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms