Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CDC42BPBQ9Y5S2 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
CDC42BPBQ9Y5S2 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CDC42BPBQ9Y5S2 AC139713.2-215ENST00000641428 5037 ntBASIC5.1□□□□□ -1.59
CDC42BPBQ9Y5S2 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC5.1□□□□□ -1.59
CDC42BPBQ9Y5S2 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
CDC42BPBQ9Y5S2 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CDC42BPBQ9Y5S2 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CDC42BPBQ9Y5S2 AL158071.1-201ENST00000430315 461 ntBASIC5.09□□□□□ -1.59
CDC42BPBQ9Y5S2 ELOCP18-201ENST00000434209 337 ntBASIC5.09□□□□□ -1.59
CDC42BPBQ9Y5S2 RPS3AP50-201ENST00000487064 803 ntBASIC5.09□□□□□ -1.59
CDC42BPBQ9Y5S2 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC5.09□□□□□ -1.59
CDC42BPBQ9Y5S2 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC5.09□□□□□ -1.59
CDC42BPBQ9Y5S2 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC5.09□□□□□ -1.59
CDC42BPBQ9Y5S2 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC5.09□□□□□ -1.59
CDC42BPBQ9Y5S2 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC5.09□□□□□ -1.59
CDC42BPBQ9Y5S2 DUXAP6-201ENST00000553858 601 ntBASIC5.09□□□□□ -1.59
CDC42BPBQ9Y5S2 AC034105.3-201ENST00000565294 442 ntBASIC5.09□□□□□ -1.59
CDC42BPBQ9Y5S2 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC5.09□□□□□ -1.59
CDC42BPBQ9Y5S2 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC5.09□□□□□ -1.59
CDC42BPBQ9Y5S2 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CDC42BPBQ9Y5S2 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.09□□□□□ -1.59
CDC42BPBQ9Y5S2 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
CDC42BPBQ9Y5S2 BTBD10P1-201ENST00000549824 1352 ntBASIC5.09□□□□□ -1.6
CDC42BPBQ9Y5S2 SNORA80A-201ENST00000363922 136 ntBASIC5.09□□□□□ -1.6
CDC42BPBQ9Y5S2 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC5.09□□□□□ -1.6
CDC42BPBQ9Y5S2 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC5.09□□□□□ -1.6
CDC42BPBQ9Y5S2 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC5.09□□□□□ -1.6
CDC42BPBQ9Y5S2 AC074367.1-201ENST00000438685 1125 ntBASIC5.09□□□□□ -1.6
CDC42BPBQ9Y5S2 ASNSP4-201ENST00000511103 447 ntBASIC5.09□□□□□ -1.6
CDC42BPBQ9Y5S2 AC008885.1-201ENST00000514930 301 ntBASIC5.09□□□□□ -1.6
CDC42BPBQ9Y5S2 RNU4ATAC17P-201ENST00000517272 120 ntBASIC5.09□□□□□ -1.6
CDC42BPBQ9Y5S2 AP000926.4-201ENST00000527351 454 ntBASIC5.09□□□□□ -1.6
CDC42BPBQ9Y5S2 AC011270.1-201ENST00000558606 583 ntBASIC5.09□□□□□ -1.6
CDC42BPBQ9Y5S2 AC110801.1-201ENST00000623590 212 ntBASIC5.09□□□□□ -1.6
CDC42BPBQ9Y5S2 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CDC42BPBQ9Y5S2 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.08□□□□□ -1.6
CDC42BPBQ9Y5S2 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
CDC42BPBQ9Y5S2 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.08□□□□□ -1.6
CDC42BPBQ9Y5S2 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
CDC42BPBQ9Y5S2 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CDC42BPBQ9Y5S2 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC5.08□□□□□ -1.6
CDC42BPBQ9Y5S2 AC107083.1-201ENST00000439643 279 ntBASIC5.08□□□□□ -1.6
CDC42BPBQ9Y5S2 APOOP4-201ENST00000513530 597 ntBASIC5.08□□□□□ -1.6
CDC42BPBQ9Y5S2 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC5.08□□□□□ -1.6
CDC42BPBQ9Y5S2 AL451007.1-201ENST00000595491 289 ntBASIC5.08□□□□□ -1.6
CDC42BPBQ9Y5S2 AL049840.6-202ENST00000603373 279 ntBASIC5.08□□□□□ -1.6
CDC42BPBQ9Y5S2 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CDC42BPBQ9Y5S2 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.07□□□□□ -1.6
CDC42BPBQ9Y5S2 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CDC42BPBQ9Y5S2 RNU4-47P-201ENST00000410876 114 ntBASIC5.07□□□□□ -1.6
CDC42BPBQ9Y5S2 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC5.07□□□□□ -1.6
CDC42BPBQ9Y5S2 IFNNP1-201ENST00000429219 553 ntBASIC5.07□□□□□ -1.6
CDC42BPBQ9Y5S2 AL139132.1-201ENST00000431587 344 ntBASIC5.07□□□□□ -1.6
CDC42BPBQ9Y5S2 KATNBL1P4-201ENST00000503545 918 ntBASIC5.07□□□□□ -1.6
CDC42BPBQ9Y5S2 AC004069.2-201ENST00000505438 1114 ntBASIC5.07□□□□□ -1.6
CDC42BPBQ9Y5S2 AC138409.2-202ENST00000507274 458 ntBASIC5.07□□□□□ -1.6
CDC42BPBQ9Y5S2 OR4R3P-201ENST00000525084 838 ntBASIC5.07□□□□□ -1.6
CDC42BPBQ9Y5S2 AC026333.2-201ENST00000542164 106 ntBASIC5.07□□□□□ -1.6
CDC42BPBQ9Y5S2 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CDC42BPBQ9Y5S2 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CDC42BPBQ9Y5S2 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.07□□□□□ -1.6
CDC42BPBQ9Y5S2 HSPA8P17-201ENST00000427029 1382 ntBASIC5.06□□□□□ -1.6
CDC42BPBQ9Y5S2 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
CDC42BPBQ9Y5S2 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
CDC42BPBQ9Y5S2 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CDC42BPBQ9Y5S2 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
CDC42BPBQ9Y5S2 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CDC42BPBQ9Y5S2 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
CDC42BPBQ9Y5S2 RNU6-729P-201ENST00000384399 107 ntBASIC5.06□□□□□ -1.6
CDC42BPBQ9Y5S2 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC5.06□□□□□ -1.6
CDC42BPBQ9Y5S2 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC5.06□□□□□ -1.6
CDC42BPBQ9Y5S2 AC000041.1-201ENST00000439655 175 ntBASIC5.06□□□□□ -1.6
CDC42BPBQ9Y5S2 TEX41-209ENST00000451478 452 ntTSL 2 BASIC5.06□□□□□ -1.6
CDC42BPBQ9Y5S2 AC010469.1-201ENST00000463864 576 ntBASIC5.06□□□□□ -1.6
CDC42BPBQ9Y5S2 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC5.06□□□□□ -1.6
CDC42BPBQ9Y5S2 AC113192.3-201ENST00000529152 742 ntBASIC5.06□□□□□ -1.6
CDC42BPBQ9Y5S2 MIR4513-201ENST00000581077 86 ntBASIC5.06□□□□□ -1.6
CDC42BPBQ9Y5S2 AL139395.1-201ENST00000603662 160 ntBASIC5.06□□□□□ -1.6
CDC42BPBQ9Y5S2 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC5.06□□□□□ -1.6
CDC42BPBQ9Y5S2 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CDC42BPBQ9Y5S2 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CDC42BPBQ9Y5S2 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
CDC42BPBQ9Y5S2 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CDC42BPBQ9Y5S2 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
CDC42BPBQ9Y5S2 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CDC42BPBQ9Y5S2 IARS-201ENST00000375627 697 ntTSL 3 BASIC5.06□□□□□ -1.6
CDC42BPBQ9Y5S2 SETP15-201ENST00000412724 337 ntBASIC5.06□□□□□ -1.6
CDC42BPBQ9Y5S2 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC5.06□□□□□ -1.6
CDC42BPBQ9Y5S2 USP9YP36-201ENST00000424581 829 ntBASIC5.06□□□□□ -1.6
CDC42BPBQ9Y5S2 USP9YP31-201ENST00000431405 881 ntBASIC5.06□□□□□ -1.6
CDC42BPBQ9Y5S2 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CDC42BPBQ9Y5S2 AC012123.2-201ENST00000485809 248 ntBASIC5.06□□□□□ -1.6
CDC42BPBQ9Y5S2 HMGN2P47-201ENST00000559378 272 ntBASIC5.06□□□□□ -1.6
CDC42BPBQ9Y5S2 MIR486-1-201ENST00000612171 68 ntBASIC5.06□□□□□ -1.6
CDC42BPBQ9Y5S2 AF117829.1-206ENST00000621883 3802 ntBASIC5.06□□□□□ -1.6
CDC42BPBQ9Y5S2 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.05□□□□□ -1.6
CDC42BPBQ9Y5S2 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CDC42BPBQ9Y5S2 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CDC42BPBQ9Y5S2 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms