Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC4.42□□□□□ -1.7
SCN11AQ9UI33 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
SCN11AQ9UI33 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SCN11AQ9UI33 OTUD4P1-201ENST00000237841 3067 ntBASIC4.41□□□□□ -1.7
SCN11AQ9UI33 OR10J6P-201ENST00000289731 930 ntBASIC4.41□□□□□ -1.7
SCN11AQ9UI33 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SCN11AQ9UI33 Z99755.1-201ENST00000414048 380 ntBASIC4.41□□□□□ -1.7
SCN11AQ9UI33 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC4.41□□□□□ -1.7
SCN11AQ9UI33 AC002075.2-201ENST00000425207 252 ntBASIC4.41□□□□□ -1.7
SCN11AQ9UI33 RPL12P46-201ENST00000436610 195 ntBASIC4.41□□□□□ -1.7
SCN11AQ9UI33 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.41□□□□□ -1.7
SCN11AQ9UI33 AC099560.2-201ENST00000457554 255 ntBASIC4.41□□□□□ -1.7
SCN11AQ9UI33 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.41□□□□□ -1.7
SCN11AQ9UI33 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.41□□□□□ -1.7
SCN11AQ9UI33 RPL5P23-201ENST00000496040 868 ntBASIC4.41□□□□□ -1.7
SCN11AQ9UI33 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.41□□□□□ -1.7
SCN11AQ9UI33 AC069306.1-201ENST00000507006 843 ntBASIC4.41□□□□□ -1.7
SCN11AQ9UI33 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.41□□□□□ -1.7
SCN11AQ9UI33 DUXAP6-201ENST00000553858 601 ntBASIC4.41□□□□□ -1.7
SCN11AQ9UI33 EIF4BP1-201ENST00000554881 351 ntBASIC4.41□□□□□ -1.7
SCN11AQ9UI33 NCAPGP2-201ENST00000557911 754 ntBASIC4.41□□□□□ -1.7
SCN11AQ9UI33 AC105227.2-201ENST00000615075 605 ntBASIC4.41□□□□□ -1.7
SCN11AQ9UI33 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SCN11AQ9UI33 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.41□□□□□ -1.7
SCN11AQ9UI33 TNPO1P3-201ENST00000436471 2662 ntBASIC4.41□□□□□ -1.7
SCN11AQ9UI33 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
SCN11AQ9UI33 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
SCN11AQ9UI33 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
SCN11AQ9UI33 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
SCN11AQ9UI33 RPL23AP57-201ENST00000332361 466 ntBASIC4.4□□□□□ -1.7
SCN11AQ9UI33 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.7
SCN11AQ9UI33 HSPE1P8-201ENST00000406997 288 ntBASIC4.4□□□□□ -1.7
SCN11AQ9UI33 AC097262.1-201ENST00000452559 548 ntBASIC4.4□□□□□ -1.7
SCN11AQ9UI33 AC005229.2-201ENST00000456995 399 ntBASIC4.4□□□□□ -1.7
SCN11AQ9UI33 RPS27AP1-201ENST00000475545 471 ntBASIC4.4□□□□□ -1.7
SCN11AQ9UI33 AC037198.2-201ENST00000478845 733 ntBASIC4.4□□□□□ -1.7
SCN11AQ9UI33 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.4□□□□□ -1.7
SCN11AQ9UI33 AL033523.1-201ENST00000605153 153 ntBASIC4.4□□□□□ -1.7
SCN11AQ9UI33 AC084036.1-201ENST00000609190 508 ntBASIC4.4□□□□□ -1.7
SCN11AQ9UI33 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.4□□□□□ -1.7
SCN11AQ9UI33 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
SCN11AQ9UI33 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SCN11AQ9UI33 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.4□□□□□ -1.71
SCN11AQ9UI33 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.4□□□□□ -1.71
SCN11AQ9UI33 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.4□□□□□ -1.71
SCN11AQ9UI33 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.4□□□□□ -1.71
SCN11AQ9UI33 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SCN11AQ9UI33 AC073522.1-201ENST00000483312 377 ntBASIC4.4□□□□□ -1.71
SCN11AQ9UI33 RPL32P34-201ENST00000486380 400 ntBASIC4.4□□□□□ -1.71
SCN11AQ9UI33 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
SCN11AQ9UI33 HMGB1P21-201ENST00000502313 581 ntBASIC4.4□□□□□ -1.71
SCN11AQ9UI33 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SCN11AQ9UI33 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.4□□□□□ -1.71
SCN11AQ9UI33 AC006386.2-201ENST00000624491 75 ntBASIC4.4□□□□□ -1.71
SCN11AQ9UI33 AC012005.1-201ENST00000624575 75 ntBASIC4.4□□□□□ -1.71
SCN11AQ9UI33 LINC02471-203ENST00000641941 4752 ntBASIC4.4□□□□□ -1.71
SCN11AQ9UI33 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.39□□□□□ -1.71
SCN11AQ9UI33 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
SCN11AQ9UI33 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
SCN11AQ9UI33 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.39□□□□□ -1.71
SCN11AQ9UI33 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SCN11AQ9UI33 NACA3P-201ENST00000359690 648 ntBASIC4.39□□□□□ -1.71
SCN11AQ9UI33 AL603766.1-201ENST00000407763 664 ntBASIC4.39□□□□□ -1.71
SCN11AQ9UI33 RNA5SP39-201ENST00000411245 120 ntBASIC4.39□□□□□ -1.71
SCN11AQ9UI33 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC4.39□□□□□ -1.71
SCN11AQ9UI33 MRPS18BP2-201ENST00000434310 759 ntBASIC4.39□□□□□ -1.71
SCN11AQ9UI33 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.39□□□□□ -1.71
SCN11AQ9UI33 RPL21P8-201ENST00000465083 535 ntBASIC4.39□□□□□ -1.71
SCN11AQ9UI33 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.39□□□□□ -1.71
SCN11AQ9UI33 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC4.39□□□□□ -1.71
SCN11AQ9UI33 AC233280.2-201ENST00000603917 1070 ntBASIC4.39□□□□□ -1.71
SCN11AQ9UI33 AL158062.1-201ENST00000619632 745 ntBASIC4.39□□□□□ -1.71
SCN11AQ9UI33 AC073073.2-201ENST00000609827 2578 ntBASIC4.39□□□□□ -1.71
SCN11AQ9UI33 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
SCN11AQ9UI33 AL353743.1-202ENST00000431724 1695 ntBASIC4.39□□□□□ -1.71
SCN11AQ9UI33 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SCN11AQ9UI33 HSPA8P19-201ENST00000505359 1517 ntBASIC4.38□□□□□ -1.71
SCN11AQ9UI33 AC018555.1-201ENST00000567548 1980 ntBASIC4.38□□□□□ -1.71
SCN11AQ9UI33 AC233263.6-201ENST00000631132 1963 ntBASIC4.38□□□□□ -1.71
SCN11AQ9UI33 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
SCN11AQ9UI33 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.38□□□□□ -1.71
SCN11AQ9UI33 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC4.38□□□□□ -1.71
SCN11AQ9UI33 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC4.38□□□□□ -1.71
SCN11AQ9UI33 AC006989.1-201ENST00000427212 131 ntBASIC4.38□□□□□ -1.71
SCN11AQ9UI33 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC4.38□□□□□ -1.71
SCN11AQ9UI33 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.38□□□□□ -1.71
SCN11AQ9UI33 AC023598.1-201ENST00000472521 361 ntBASIC4.38□□□□□ -1.71
SCN11AQ9UI33 AC016590.3-201ENST00000611171 753 ntBASIC4.38□□□□□ -1.71
SCN11AQ9UI33 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
SCN11AQ9UI33 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
SCN11AQ9UI33 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.38□□□□□ -1.71
SCN11AQ9UI33 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SCN11AQ9UI33 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SCN11AQ9UI33 ANKRD36P1-201ENST00000344424 659 ntBASIC4.37□□□□□ -1.71
SCN11AQ9UI33 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SCN11AQ9UI33 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
SCN11AQ9UI33 AL121834.1-202ENST00000404494 277 ntBASIC4.37□□□□□ -1.71
SCN11AQ9UI33 AL136131.1-201ENST00000406079 803 ntBASIC4.37□□□□□ -1.71
SCN11AQ9UI33 HMGN1P24-201ENST00000412282 298 ntBASIC4.37□□□□□ -1.71
SCN11AQ9UI33 BX842559.1-201ENST00000419615 532 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms