Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AC006499.2-201ENST00000513470 337 ntBASIC4.68□□□□□ -1.66
LRFN1Q9P244 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.68□□□□□ -1.66
LRFN1Q9P244 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC4.68□□□□□ -1.66
LRFN1Q9P244 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LRFN1Q9P244 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.68□□□□□ -1.66
LRFN1Q9P244 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.68□□□□□ -1.66
LRFN1Q9P244 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.68□□□□□ -1.66
LRFN1Q9P244 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.68□□□□□ -1.66
LRFN1Q9P244 MIR4637-201ENST00000582405 84 ntBASIC4.68□□□□□ -1.66
LRFN1Q9P244 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC4.68□□□□□ -1.66
LRFN1Q9P244 OR4G1P-201ENST00000588632 938 ntBASIC4.68□□□□□ -1.66
LRFN1Q9P244 HMGB2P1-201ENST00000591146 634 ntBASIC4.68□□□□□ -1.66
LRFN1Q9P244 AC087283.1-201ENST00000604029 1074 ntBASIC4.68□□□□□ -1.66
LRFN1Q9P244 AC104687.2-201ENST00000604442 342 ntBASIC4.68□□□□□ -1.66
LRFN1Q9P244 AC097065.2-201ENST00000608159 533 ntBASIC4.68□□□□□ -1.66
LRFN1Q9P244 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.68□□□□□ -1.66
LRFN1Q9P244 AL136981.2-201ENST00000617319 734 ntBASIC4.68□□□□□ -1.66
LRFN1Q9P244 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LRFN1Q9P244 AC009318.4-201ENST00000620496 486 ntBASIC4.68□□□□□ -1.66
LRFN1Q9P244 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC4.68□□□□□ -1.66
LRFN1Q9P244 BMS1P21-201ENST00000634565 365 ntBASIC4.68□□□□□ -1.66
LRFN1Q9P244 CU459211.1-201ENST00000635667 749 ntBASIC4.68□□□□□ -1.66
LRFN1Q9P244 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.68□□□□□ -1.66
LRFN1Q9P244 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LRFN1Q9P244 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LRFN1Q9P244 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
LRFN1Q9P244 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.68□□□□□ -1.66
LRFN1Q9P244 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LRFN1Q9P244 MTND5P24-201ENST00000438892 1767 ntBASIC4.68□□□□□ -1.66
LRFN1Q9P244 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.67□□□□□ -1.66
LRFN1Q9P244 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LRFN1Q9P244 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.67□□□□□ -1.66
LRFN1Q9P244 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LRFN1Q9P244 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LRFN1Q9P244 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LRFN1Q9P244 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LRFN1Q9P244 RN7SKP95-201ENST00000362860 303 ntBASIC4.67□□□□□ -1.66
LRFN1Q9P244 SNORA4.1-201ENST00000364263 144 ntBASIC4.67□□□□□ -1.66
LRFN1Q9P244 RNA5SP428-201ENST00000365129 132 ntBASIC4.67□□□□□ -1.66
LRFN1Q9P244 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
LRFN1Q9P244 SNORA48.4-201ENST00000391089 134 ntBASIC4.67□□□□□ -1.66
LRFN1Q9P244 CYB5AP4-201ENST00000396692 399 ntBASIC4.67□□□□□ -1.66
LRFN1Q9P244 FAR2P2-201ENST00000413041 594 ntBASIC4.67□□□□□ -1.66
LRFN1Q9P244 COX6B1P1-201ENST00000415962 213 ntBASIC4.67□□□□□ -1.66
LRFN1Q9P244 CHEK2P3-201ENST00000416118 248 ntBASIC4.67□□□□□ -1.66
LRFN1Q9P244 MTCYBP38-201ENST00000417160 1123 ntBASIC4.67□□□□□ -1.66
LRFN1Q9P244 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.67□□□□□ -1.66
LRFN1Q9P244 AC004074.1-201ENST00000421810 1063 ntBASIC4.67□□□□□ -1.66
LRFN1Q9P244 FAR2P4-202ENST00000425399 584 ntBASIC4.67□□□□□ -1.66
LRFN1Q9P244 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC4.67□□□□□ -1.66
LRFN1Q9P244 AC073335.1-201ENST00000427776 363 ntBASIC4.67□□□□□ -1.66
LRFN1Q9P244 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC4.67□□□□□ -1.66
LRFN1Q9P244 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.67□□□□□ -1.66
LRFN1Q9P244 RHOT1P3-201ENST00000436571 331 ntBASIC4.67□□□□□ -1.66
LRFN1Q9P244 GTF3AP5-201ENST00000442645 697 ntBASIC4.67□□□□□ -1.66
LRFN1Q9P244 MTND5P2-201ENST00000442927 1142 ntBASIC4.67□□□□□ -1.66
LRFN1Q9P244 AL354714.3-201ENST00000447284 493 ntBASIC4.67□□□□□ -1.66
LRFN1Q9P244 RPL29P29-201ENST00000448725 423 ntBASIC4.67□□□□□ -1.66
LRFN1Q9P244 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC4.67□□□□□ -1.66
LRFN1Q9P244 TPT1P13-201ENST00000449760 499 ntBASIC4.67□□□□□ -1.66
LRFN1Q9P244 CEACAMP6-201ENST00000452007 574 ntBASIC4.67□□□□□ -1.66
LRFN1Q9P244 ART2BP-201ENST00000453501 499 ntBASIC4.67□□□□□ -1.66
LRFN1Q9P244 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.67□□□□□ -1.66
LRFN1Q9P244 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC4.67□□□□□ -1.66
LRFN1Q9P244 RPL7P16-201ENST00000479738 738 ntBASIC4.67□□□□□ -1.66
LRFN1Q9P244 CEACAMP10-202ENST00000495431 496 ntBASIC4.67□□□□□ -1.66
LRFN1Q9P244 TMEM248P1-201ENST00000510579 951 ntBASIC4.67□□□□□ -1.66
LRFN1Q9P244 AF186190.1-201ENST00000517470 480 ntBASIC4.67□□□□□ -1.66
LRFN1Q9P244 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.67□□□□□ -1.66
LRFN1Q9P244 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.67□□□□□ -1.66
LRFN1Q9P244 OR8L1P-201ENST00000534005 955 ntBASIC4.67□□□□□ -1.66
LRFN1Q9P244 VBP1-203ENST00000535916 944 ntTSL 2 BASIC4.67□□□□□ -1.66
LRFN1Q9P244 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC4.67□□□□□ -1.66
LRFN1Q9P244 ELOCP32-201ENST00000548625 324 ntBASIC4.67□□□□□ -1.66
LRFN1Q9P244 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC4.67□□□□□ -1.66
LRFN1Q9P244 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.67□□□□□ -1.66
LRFN1Q9P244 HSPE1P3-201ENST00000559254 309 ntBASIC4.67□□□□□ -1.66
LRFN1Q9P244 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.67□□□□□ -1.66
LRFN1Q9P244 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.67□□□□□ -1.66
LRFN1Q9P244 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC4.67□□□□□ -1.66
LRFN1Q9P244 BNIP3P24-201ENST00000593398 557 ntBASIC4.67□□□□□ -1.66
LRFN1Q9P244 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.67□□□□□ -1.66
LRFN1Q9P244 AC105254.2-201ENST00000603636 436 ntBASIC4.67□□□□□ -1.66
LRFN1Q9P244 AC087783.2-201ENST00000605070 562 ntBASIC4.67□□□□□ -1.66
LRFN1Q9P244 AL513477.2-201ENST00000607858 568 ntBASIC4.67□□□□□ -1.66
LRFN1Q9P244 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC4.67□□□□□ -1.66
LRFN1Q9P244 MIR6839-201ENST00000620425 113 ntBASIC4.67□□□□□ -1.66
LRFN1Q9P244 AC004943.3-201ENST00000624116 600 ntBASIC4.67□□□□□ -1.66
LRFN1Q9P244 AC103706.2-201ENST00000638080 240 ntBASIC4.67□□□□□ -1.66
LRFN1Q9P244 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
LRFN1Q9P244 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LRFN1Q9P244 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LRFN1Q9P244 AL079343.1-201ENST00000572358 1771 ntBASIC4.67□□□□□ -1.66
LRFN1Q9P244 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
LRFN1Q9P244 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LRFN1Q9P244 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
LRFN1Q9P244 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
LRFN1Q9P244 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LRFN1Q9P244 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LRFN1Q9P244 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms