Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 MIR3138-201ENST00000585238 82 ntBASIC5.15□□□□□ -1.59
COL20A1Q9P218 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.15□□□□□ -1.59
COL20A1Q9P218 Z99497.2-201ENST00000603634 310 ntBASIC5.15□□□□□ -1.59
COL20A1Q9P218 Z94722.1-201ENST00000604328 474 ntBASIC5.15□□□□□ -1.59
COL20A1Q9P218 MIR6891-201ENST00000618788 93 ntBASIC5.15□□□□□ -1.59
COL20A1Q9P218 AP003399.1-201ENST00000637534 361 ntBASIC5.15□□□□□ -1.59
COL20A1Q9P218 AC103706.2-201ENST00000638080 240 ntBASIC5.15□□□□□ -1.59
COL20A1Q9P218 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
COL20A1Q9P218 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
COL20A1Q9P218 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
COL20A1Q9P218 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.15□□□□□ -1.59
COL20A1Q9P218 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
COL20A1Q9P218 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
COL20A1Q9P218 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
COL20A1Q9P218 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.15□□□□□ -1.59
COL20A1Q9P218 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC5.15□□□□□ -1.59
COL20A1Q9P218 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
COL20A1Q9P218 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
COL20A1Q9P218 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.14□□□□□ -1.59
COL20A1Q9P218 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
COL20A1Q9P218 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
COL20A1Q9P218 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.14□□□□□ -1.59
COL20A1Q9P218 AC090017.1-201ENST00000548612 1779 ntBASIC5.14□□□□□ -1.59
COL20A1Q9P218 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
COL20A1Q9P218 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
COL20A1Q9P218 AC008033.1-201ENST00000216407 1162 ntBASIC5.14□□□□□ -1.59
COL20A1Q9P218 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
COL20A1Q9P218 RNU6-582P-201ENST00000362989 107 ntBASIC5.14□□□□□ -1.59
COL20A1Q9P218 RNU1-83P-201ENST00000363426 164 ntBASIC5.14□□□□□ -1.59
COL20A1Q9P218 SDHCP2-201ENST00000398565 501 ntBASIC5.14□□□□□ -1.59
COL20A1Q9P218 AGR3-202ENST00000402239 563 ntTSL 2 BASIC5.14□□□□□ -1.59
COL20A1Q9P218 AL049693.1-201ENST00000402760 611 ntBASIC5.14□□□□□ -1.59
COL20A1Q9P218 NCSTNP1-201ENST00000406229 144 ntBASIC5.14□□□□□ -1.59
COL20A1Q9P218 AL139098.1-201ENST00000407291 389 ntBASIC5.14□□□□□ -1.59
COL20A1Q9P218 RNU6-757P-201ENST00000410334 100 ntBASIC5.14□□□□□ -1.59
COL20A1Q9P218 AC002524.1-201ENST00000411687 547 ntBASIC5.14□□□□□ -1.59
COL20A1Q9P218 SNRPFP1-201ENST00000414761 252 ntBASIC5.14□□□□□ -1.59
COL20A1Q9P218 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
COL20A1Q9P218 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC5.14□□□□□ -1.59
COL20A1Q9P218 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
COL20A1Q9P218 RAD23BP1-201ENST00000421404 1227 ntBASIC5.14□□□□□ -1.59
COL20A1Q9P218 AC099336.2-201ENST00000422457 254 ntBASIC5.14□□□□□ -1.59
COL20A1Q9P218 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC5.14□□□□□ -1.59
COL20A1Q9P218 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC5.14□□□□□ -1.59
COL20A1Q9P218 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC5.14□□□□□ -1.59
COL20A1Q9P218 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.14□□□□□ -1.59
COL20A1Q9P218 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC5.14□□□□□ -1.59
COL20A1Q9P218 UBE2D3P1-201ENST00000436669 444 ntBASIC5.14□□□□□ -1.59
COL20A1Q9P218 AL354941.1-201ENST00000438600 464 ntBASIC5.14□□□□□ -1.59
COL20A1Q9P218 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
COL20A1Q9P218 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC5.14□□□□□ -1.59
COL20A1Q9P218 COX6CP18-201ENST00000448769 222 ntBASIC5.14□□□□□ -1.59
COL20A1Q9P218 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.14□□□□□ -1.59
COL20A1Q9P218 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC5.14□□□□□ -1.59
COL20A1Q9P218 AL109741.2-201ENST00000455561 343 ntBASIC5.14□□□□□ -1.59
COL20A1Q9P218 AC099560.2-201ENST00000457554 255 ntBASIC5.14□□□□□ -1.59
COL20A1Q9P218 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC5.14□□□□□ -1.59
COL20A1Q9P218 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC5.14□□□□□ -1.59
COL20A1Q9P218 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
COL20A1Q9P218 RN7SL809P-201ENST00000482040 297 ntBASIC5.14□□□□□ -1.59
COL20A1Q9P218 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
COL20A1Q9P218 AC010587.2-201ENST00000511727 448 ntBASIC5.14□□□□□ -1.59
COL20A1Q9P218 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC5.14□□□□□ -1.59
COL20A1Q9P218 RNU6-488P-201ENST00000515918 99 ntBASIC5.14□□□□□ -1.59
COL20A1Q9P218 RN7SKP96-201ENST00000516948 297 ntBASIC5.14□□□□□ -1.59
COL20A1Q9P218 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.14□□□□□ -1.59
COL20A1Q9P218 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC5.14□□□□□ -1.59
COL20A1Q9P218 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.14□□□□□ -1.59
COL20A1Q9P218 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC5.14□□□□□ -1.59
COL20A1Q9P218 MTCYBP27-201ENST00000555160 670 ntBASIC5.14□□□□□ -1.59
COL20A1Q9P218 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.14□□□□□ -1.59
COL20A1Q9P218 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.14□□□□□ -1.59
COL20A1Q9P218 CASC16-202ENST00000563844 610 ntTSL 3 BASIC5.14□□□□□ -1.59
COL20A1Q9P218 ATP5J2P6-201ENST00000565203 266 ntBASIC5.14□□□□□ -1.59
COL20A1Q9P218 AC023575.1-201ENST00000580510 358 ntBASIC5.14□□□□□ -1.59
COL20A1Q9P218 AC017100.2-201ENST00000584628 355 ntBASIC5.14□□□□□ -1.59
COL20A1Q9P218 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.14□□□□□ -1.59
COL20A1Q9P218 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC5.14□□□□□ -1.59
COL20A1Q9P218 AC093783.1-201ENST00000612976 329 ntBASIC5.14□□□□□ -1.59
COL20A1Q9P218 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
COL20A1Q9P218 AC069209.1-201ENST00000619282 651 ntBASIC5.14□□□□□ -1.59
COL20A1Q9P218 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
COL20A1Q9P218 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
COL20A1Q9P218 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
COL20A1Q9P218 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
COL20A1Q9P218 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.14□□□□□ -1.59
COL20A1Q9P218 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.14□□□□□ -1.59
COL20A1Q9P218 AL022393.1-201ENST00000625142 1677 ntBASIC5.14□□□□□ -1.59
COL20A1Q9P218 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
COL20A1Q9P218 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
COL20A1Q9P218 AC026523.2-201ENST00000625039 7739 ntBASIC5.14□□□□□ -1.59
COL20A1Q9P218 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.14□□□□□ -1.59
COL20A1Q9P218 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
COL20A1Q9P218 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.13□□□□□ -1.59
COL20A1Q9P218 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
COL20A1Q9P218 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL20A1Q9P218 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
COL20A1Q9P218 SGO1P2-201ENST00000429458 1589 ntBASIC5.13□□□□□ -1.59
COL20A1Q9P218 LINC00622-201ENST00000562811 1570 ntBASIC5.13□□□□□ -1.59
COL20A1Q9P218 STX3-208ENST00000641815 3236 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms