Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 LINC00993-201ENST00000420453 540 ntBASIC4.3□□□□□ -1.72
PCDHB16Q9NRJ7 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC4.3□□□□□ -1.72
PCDHB16Q9NRJ7 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PCDHB16Q9NRJ7 PSMA2P3-201ENST00000429685 675 ntBASIC4.3□□□□□ -1.72
PCDHB16Q9NRJ7 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.3□□□□□ -1.72
PCDHB16Q9NRJ7 NMNAT1P2-201ENST00000435192 860 ntBASIC4.3□□□□□ -1.72
PCDHB16Q9NRJ7 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.3□□□□□ -1.72
PCDHB16Q9NRJ7 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.3□□□□□ -1.72
PCDHB16Q9NRJ7 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC4.3□□□□□ -1.72
PCDHB16Q9NRJ7 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC4.3□□□□□ -1.72
PCDHB16Q9NRJ7 AL354714.3-201ENST00000447284 493 ntBASIC4.3□□□□□ -1.72
PCDHB16Q9NRJ7 RPL18AP17-201ENST00000455326 198 ntBASIC4.3□□□□□ -1.72
PCDHB16Q9NRJ7 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.3□□□□□ -1.72
PCDHB16Q9NRJ7 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.3□□□□□ -1.72
PCDHB16Q9NRJ7 RN7SL517P-201ENST00000462240 305 ntBASIC4.3□□□□□ -1.72
PCDHB16Q9NRJ7 MTND1P16-201ENST00000465177 898 ntBASIC4.3□□□□□ -1.72
PCDHB16Q9NRJ7 AC004263.1-201ENST00000479327 332 ntBASIC4.3□□□□□ -1.72
PCDHB16Q9NRJ7 RPS21P4-201ENST00000487122 248 ntBASIC4.3□□□□□ -1.72
PCDHB16Q9NRJ7 AC010587.2-201ENST00000511727 448 ntBASIC4.3□□□□□ -1.72
PCDHB16Q9NRJ7 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.3□□□□□ -1.72
PCDHB16Q9NRJ7 ENPP7P9-201ENST00000514456 627 ntBASIC4.3□□□□□ -1.72
PCDHB16Q9NRJ7 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.3□□□□□ -1.72
PCDHB16Q9NRJ7 LECT2-205ENST00000522943 574 ntTSL 3 BASIC4.3□□□□□ -1.72
PCDHB16Q9NRJ7 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC4.3□□□□□ -1.72
PCDHB16Q9NRJ7 AC023538.1-201ENST00000534576 736 ntBASIC4.3□□□□□ -1.72
PCDHB16Q9NRJ7 ERP27-202ENST00000540097 993 ntTSL 2 BASIC4.3□□□□□ -1.72
PCDHB16Q9NRJ7 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC4.3□□□□□ -1.72
PCDHB16Q9NRJ7 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC4.3□□□□□ -1.72
PCDHB16Q9NRJ7 AC005412.1-201ENST00000580812 1049 ntBASIC4.3□□□□□ -1.72
PCDHB16Q9NRJ7 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.3□□□□□ -1.72
PCDHB16Q9NRJ7 LLPHP1-201ENST00000603571 367 ntBASIC4.3□□□□□ -1.72
PCDHB16Q9NRJ7 Z99289.3-201ENST00000605586 594 ntBASIC4.3□□□□□ -1.72
PCDHB16Q9NRJ7 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.3□□□□□ -1.72
PCDHB16Q9NRJ7 AL513477.2-201ENST00000607858 568 ntBASIC4.3□□□□□ -1.72
PCDHB16Q9NRJ7 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC4.3□□□□□ -1.72
PCDHB16Q9NRJ7 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.3□□□□□ -1.72
PCDHB16Q9NRJ7 AL450489.1-201ENST00000612071 468 ntBASIC4.3□□□□□ -1.72
PCDHB16Q9NRJ7 AC090527.3-201ENST00000619041 548 ntBASIC4.3□□□□□ -1.72
PCDHB16Q9NRJ7 AP000484.1-201ENST00000620067 1252 ntBASIC4.3□□□□□ -1.72
PCDHB16Q9NRJ7 AP002791.1-201ENST00000623291 381 ntBASIC4.3□□□□□ -1.72
PCDHB16Q9NRJ7 AP002505.2-201ENST00000623585 696 ntBASIC4.3□□□□□ -1.72
PCDHB16Q9NRJ7 AC097520.1-201ENST00000624435 385 ntBASIC4.3□□□□□ -1.72
PCDHB16Q9NRJ7 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
PCDHB16Q9NRJ7 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PCDHB16Q9NRJ7 AC068254.2-201ENST00000623938 3577 ntBASIC4.3□□□□□ -1.72
PCDHB16Q9NRJ7 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PCDHB16Q9NRJ7 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PCDHB16Q9NRJ7 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.3□□□□□ -1.72
PCDHB16Q9NRJ7 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.3□□□□□ -1.72
PCDHB16Q9NRJ7 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
PCDHB16Q9NRJ7 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHB16Q9NRJ7 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
PCDHB16Q9NRJ7 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHB16Q9NRJ7 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
PCDHB16Q9NRJ7 AC006971.1-201ENST00000407916 4486 ntBASIC4.29□□□□□ -1.72
PCDHB16Q9NRJ7 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.29□□□□□ -1.72
PCDHB16Q9NRJ7 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHB16Q9NRJ7 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
PCDHB16Q9NRJ7 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHB16Q9NRJ7 AL359893.1-201ENST00000447628 1580 ntBASIC4.29□□□□□ -1.72
PCDHB16Q9NRJ7 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
PCDHB16Q9NRJ7 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHB16Q9NRJ7 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.29□□□□□ -1.72
PCDHB16Q9NRJ7 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHB16Q9NRJ7 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
PCDHB16Q9NRJ7 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHB16Q9NRJ7 RNA5SP183-201ENST00000362452 119 ntBASIC4.29□□□□□ -1.72
PCDHB16Q9NRJ7 RN7SKP162-201ENST00000363605 345 ntBASIC4.29□□□□□ -1.72
PCDHB16Q9NRJ7 RNU6-356P-201ENST00000384140 107 ntBASIC4.29□□□□□ -1.72
PCDHB16Q9NRJ7 Z97832.1-201ENST00000402490 328 ntBASIC4.29□□□□□ -1.72
PCDHB16Q9NRJ7 AL024474.1-201ENST00000404655 591 ntBASIC4.29□□□□□ -1.72
PCDHB16Q9NRJ7 HDGFP1-201ENST00000405943 252 ntBASIC4.29□□□□□ -1.72
PCDHB16Q9NRJ7 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.29□□□□□ -1.72
PCDHB16Q9NRJ7 TMBIM7P-201ENST00000418074 855 ntBASIC4.29□□□□□ -1.72
PCDHB16Q9NRJ7 RPL7P53-201ENST00000421245 739 ntBASIC4.29□□□□□ -1.72
PCDHB16Q9NRJ7 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC4.29□□□□□ -1.72
PCDHB16Q9NRJ7 AC108075.1-201ENST00000424692 529 ntBASIC4.29□□□□□ -1.72
PCDHB16Q9NRJ7 NIPA2P1-201ENST00000426223 976 ntBASIC4.29□□□□□ -1.72
PCDHB16Q9NRJ7 RPL7L1P9-201ENST00000431298 745 ntBASIC4.29□□□□□ -1.72
PCDHB16Q9NRJ7 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.29□□□□□ -1.72
PCDHB16Q9NRJ7 MTND4P6-201ENST00000438297 472 ntBASIC4.29□□□□□ -1.72
PCDHB16Q9NRJ7 MTND3P1-201ENST00000441336 220 ntBASIC4.29□□□□□ -1.72
PCDHB16Q9NRJ7 RPL23AP33-201ENST00000442301 452 ntBASIC4.29□□□□□ -1.72
PCDHB16Q9NRJ7 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC4.29□□□□□ -1.72
PCDHB16Q9NRJ7 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC4.29□□□□□ -1.72
PCDHB16Q9NRJ7 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.29□□□□□ -1.72
PCDHB16Q9NRJ7 MTND2P19-201ENST00000449129 1012 ntBASIC4.29□□□□□ -1.72
PCDHB16Q9NRJ7 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.29□□□□□ -1.72
PCDHB16Q9NRJ7 CEACAMP6-201ENST00000452007 574 ntBASIC4.29□□□□□ -1.72
PCDHB16Q9NRJ7 AC009963.2-201ENST00000453431 138 ntBASIC4.29□□□□□ -1.72
PCDHB16Q9NRJ7 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.29□□□□□ -1.72
PCDHB16Q9NRJ7 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.29□□□□□ -1.72
PCDHB16Q9NRJ7 MTCO2P6-201ENST00000463134 685 ntBASIC4.29□□□□□ -1.72
PCDHB16Q9NRJ7 AC093270.2-201ENST00000486157 792 ntBASIC4.29□□□□□ -1.72
PCDHB16Q9NRJ7 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC4.29□□□□□ -1.72
PCDHB16Q9NRJ7 AC020890.1-201ENST00000491837 504 ntBASIC4.29□□□□□ -1.72
PCDHB16Q9NRJ7 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHB16Q9NRJ7 SNORA3.4-201ENST00000515969 96 ntBASIC4.29□□□□□ -1.72
PCDHB16Q9NRJ7 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.29□□□□□ -1.72
PCDHB16Q9NRJ7 RNU4-60P-201ENST00000517239 135 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms