Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 NDUFB1P1-201ENST00000435191 180 ntBASIC3.18□□□□□ -1.9
KIAA1549Q9HCM3 PDSS1P2-201ENST00000449397 678 ntBASIC3.18□□□□□ -1.9
KIAA1549Q9HCM3 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.18□□□□□ -1.9
KIAA1549Q9HCM3 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC3.18□□□□□ -1.9
KIAA1549Q9HCM3 FTH1P24-201ENST00000503502 462 ntBASIC3.18□□□□□ -1.9
KIAA1549Q9HCM3 SNORA70.17-201ENST00000516449 133 ntBASIC3.18□□□□□ -1.9
KIAA1549Q9HCM3 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.18□□□□□ -1.9
KIAA1549Q9HCM3 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.18□□□□□ -1.9
KIAA1549Q9HCM3 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC3.18□□□□□ -1.9
KIAA1549Q9HCM3 MIR5186-201ENST00000577504 120 ntBASIC3.18□□□□□ -1.9
KIAA1549Q9HCM3 AC011471.1-201ENST00000585766 187 ntBASIC3.18□□□□□ -1.9
KIAA1549Q9HCM3 AL034351.1-201ENST00000605288 668 ntBASIC3.18□□□□□ -1.9
KIAA1549Q9HCM3 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.18□□□□□ -1.9
KIAA1549Q9HCM3 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.18□□□□□ -1.9
KIAA1549Q9HCM3 AC091953.5-201ENST00000622919 233 ntBASIC3.18□□□□□ -1.9
KIAA1549Q9HCM3 AC244205.2-202ENST00000635781 342 ntBASIC3.18□□□□□ -1.9
KIAA1549Q9HCM3 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
KIAA1549Q9HCM3 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
KIAA1549Q9HCM3 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.18□□□□□ -1.9
KIAA1549Q9HCM3 MTCO1P12-201ENST00000414273 1543 ntBASIC3.18□□□□□ -1.9
KIAA1549Q9HCM3 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
KIAA1549Q9HCM3 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.18□□□□□ -1.9
KIAA1549Q9HCM3 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
KIAA1549Q9HCM3 MTHFD2P2-201ENST00000407725 247 ntBASIC3.18□□□□□ -1.9
KIAA1549Q9HCM3 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC3.18□□□□□ -1.9
KIAA1549Q9HCM3 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.18□□□□□ -1.9
KIAA1549Q9HCM3 NAP1L4P3-201ENST00000432820 1147 ntBASIC3.18□□□□□ -1.9
KIAA1549Q9HCM3 RPS20P1-201ENST00000434853 354 ntBASIC3.18□□□□□ -1.9
KIAA1549Q9HCM3 NPM1P48-201ENST00000436002 853 ntBASIC3.18□□□□□ -1.9
KIAA1549Q9HCM3 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.18□□□□□ -1.9
KIAA1549Q9HCM3 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.18□□□□□ -1.9
KIAA1549Q9HCM3 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.18□□□□□ -1.9
KIAA1549Q9HCM3 AL031985.2-201ENST00000600955 480 ntBASIC3.18□□□□□ -1.9
KIAA1549Q9HCM3 AC006077.1-201ENST00000604746 343 ntBASIC3.18□□□□□ -1.9
KIAA1549Q9HCM3 AC078899.5-201ENST00000612475 178 ntBASIC3.18□□□□□ -1.9
KIAA1549Q9HCM3 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC3.18□□□□□ -1.9
KIAA1549Q9HCM3 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.18□□□□□ -1.9
KIAA1549Q9HCM3 LINC02471-203ENST00000641941 4752 ntBASIC3.18□□□□□ -1.9
KIAA1549Q9HCM3 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.18□□□□□ -1.9
KIAA1549Q9HCM3 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.17□□□□□ -1.9
KIAA1549Q9HCM3 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
KIAA1549Q9HCM3 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
KIAA1549Q9HCM3 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC3.17□□□□□ -1.9
KIAA1549Q9HCM3 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
KIAA1549Q9HCM3 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
KIAA1549Q9HCM3 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
KIAA1549Q9HCM3 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
KIAA1549Q9HCM3 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
KIAA1549Q9HCM3 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.17□□□□□ -1.9
KIAA1549Q9HCM3 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
KIAA1549Q9HCM3 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
KIAA1549Q9HCM3 RNU6-1263P-201ENST00000384601 106 ntBASIC3.17□□□□□ -1.9
KIAA1549Q9HCM3 RNVU1-14-201ENST00000384770 164 ntBASIC3.17□□□□□ -1.9
KIAA1549Q9HCM3 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.17□□□□□ -1.9
KIAA1549Q9HCM3 RPS7P15-201ENST00000415804 584 ntBASIC3.17□□□□□ -1.9
KIAA1549Q9HCM3 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.17□□□□□ -1.9
KIAA1549Q9HCM3 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.17□□□□□ -1.9
KIAA1549Q9HCM3 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC3.17□□□□□ -1.9
KIAA1549Q9HCM3 AL591503.2-201ENST00000442314 1005 ntBASIC3.17□□□□□ -1.9
KIAA1549Q9HCM3 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.17□□□□□ -1.9
KIAA1549Q9HCM3 AC010307.1-201ENST00000467206 836 ntBASIC3.17□□□□□ -1.9
KIAA1549Q9HCM3 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
KIAA1549Q9HCM3 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC3.17□□□□□ -1.9
KIAA1549Q9HCM3 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.17□□□□□ -1.9
KIAA1549Q9HCM3 AC006960.3-201ENST00000561845 705 ntBASIC3.17□□□□□ -1.9
KIAA1549Q9HCM3 AC141257.3-201ENST00000572906 215 ntBASIC3.17□□□□□ -1.9
KIAA1549Q9HCM3 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.17□□□□□ -1.9
KIAA1549Q9HCM3 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.17□□□□□ -1.9
KIAA1549Q9HCM3 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.17□□□□□ -1.9
KIAA1549Q9HCM3 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
KIAA1549Q9HCM3 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.17□□□□□ -1.9
KIAA1549Q9HCM3 AC008725.1-201ENST00000605123 2263 ntBASIC3.17□□□□□ -1.9
KIAA1549Q9HCM3 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
KIAA1549Q9HCM3 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
KIAA1549Q9HCM3 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
KIAA1549Q9HCM3 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
KIAA1549Q9HCM3 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
KIAA1549Q9HCM3 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.16□□□□□ -1.9
KIAA1549Q9HCM3 OSTCP5-201ENST00000425293 453 ntBASIC3.16□□□□□ -1.9
KIAA1549Q9HCM3 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.16□□□□□ -1.9
KIAA1549Q9HCM3 AC073387.1-201ENST00000453261 709 ntBASIC3.16□□□□□ -1.9
KIAA1549Q9HCM3 AC099563.1-201ENST00000456086 418 ntBASIC3.16□□□□□ -1.9
KIAA1549Q9HCM3 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC3.16□□□□□ -1.9
KIAA1549Q9HCM3 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.16□□□□□ -1.9
KIAA1549Q9HCM3 AC099489.2-201ENST00000574976 260 ntBASIC3.16□□□□□ -1.9
KIAA1549Q9HCM3 AC067852.3-201ENST00000589177 561 ntBASIC3.16□□□□□ -1.9
KIAA1549Q9HCM3 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC3.16□□□□□ -1.9
KIAA1549Q9HCM3 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.16□□□□□ -1.9
KIAA1549Q9HCM3 AL133412.1-201ENST00000380194 2992 ntBASIC3.16□□□□□ -1.9
KIAA1549Q9HCM3 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
KIAA1549Q9HCM3 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
KIAA1549Q9HCM3 AC058791.1-201ENST00000608412 3198 ntBASIC3.16□□□□□ -1.9
KIAA1549Q9HCM3 AC009229.4-201ENST00000623854 1947 ntBASIC3.16□□□□□ -1.9
KIAA1549Q9HCM3 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
KIAA1549Q9HCM3 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
KIAA1549Q9HCM3 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
KIAA1549Q9HCM3 RNU6-984P-201ENST00000363236 109 ntBASIC3.16□□□□□ -1.9
KIAA1549Q9HCM3 MIR491-201ENST00000384877 84 ntBASIC3.16□□□□□ -1.9
KIAA1549Q9HCM3 PTMAP5-201ENST00000393073 333 ntBASIC3.16□□□□□ -1.9
KIAA1549Q9HCM3 HSPE1P8-201ENST00000406997 288 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms