Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC6.53□□□□□ -1.36
UBE2OQ9C0C9 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.53□□□□□ -1.36
UBE2OQ9C0C9 ARHGAP42P1-201ENST00000507474 1976 ntBASIC6.53□□□□□ -1.36
UBE2OQ9C0C9 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.53□□□□□ -1.36
UBE2OQ9C0C9 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
UBE2OQ9C0C9 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.36
UBE2OQ9C0C9 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
UBE2OQ9C0C9 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
UBE2OQ9C0C9 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
UBE2OQ9C0C9 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
UBE2OQ9C0C9 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
UBE2OQ9C0C9 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
UBE2OQ9C0C9 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
UBE2OQ9C0C9 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
UBE2OQ9C0C9 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
UBE2OQ9C0C9 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
UBE2OQ9C0C9 OR11H4-201ENST00000315409 1082 ntBASIC6.52□□□□□ -1.37
UBE2OQ9C0C9 Y_RNA.128-201ENST00000363391 112 ntBASIC6.52□□□□□ -1.37
UBE2OQ9C0C9 Y_RNA.146-201ENST00000363549 102 ntBASIC6.52□□□□□ -1.37
UBE2OQ9C0C9 RNU6-532P-201ENST00000384318 107 ntBASIC6.52□□□□□ -1.37
UBE2OQ9C0C9 Y_RNA.474-201ENST00000384341 102 ntBASIC6.52□□□□□ -1.37
UBE2OQ9C0C9 AL136133.1-201ENST00000413694 376 ntBASIC6.52□□□□□ -1.37
UBE2OQ9C0C9 MRPL53P1-201ENST00000414323 319 ntBASIC6.52□□□□□ -1.37
UBE2OQ9C0C9 SLC35E1P1-201ENST00000419313 864 ntBASIC6.52□□□□□ -1.37
UBE2OQ9C0C9 CYP4F30P-202ENST00000420048 405 ntBASIC6.52□□□□□ -1.37
UBE2OQ9C0C9 AC018630.2-202ENST00000422992 927 ntBASIC6.52□□□□□ -1.37
UBE2OQ9C0C9 RPL35AP12-201ENST00000425362 338 ntBASIC6.52□□□□□ -1.37
UBE2OQ9C0C9 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.52□□□□□ -1.37
UBE2OQ9C0C9 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC6.52□□□□□ -1.37
UBE2OQ9C0C9 OR2B7P-201ENST00000429302 934 ntBASIC6.52□□□□□ -1.37
UBE2OQ9C0C9 AC006466.1-201ENST00000438721 289 ntBASIC6.52□□□□□ -1.37
UBE2OQ9C0C9 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC6.52□□□□□ -1.37
UBE2OQ9C0C9 RPL31P44-201ENST00000447680 377 ntBASIC6.52□□□□□ -1.37
UBE2OQ9C0C9 AC092967.1-201ENST00000449016 481 ntBASIC6.52□□□□□ -1.37
UBE2OQ9C0C9 BTF3P5-201ENST00000457252 467 ntBASIC6.52□□□□□ -1.37
UBE2OQ9C0C9 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC6.52□□□□□ -1.37
UBE2OQ9C0C9 AC083798.1-201ENST00000472671 131 ntBASIC6.52□□□□□ -1.37
UBE2OQ9C0C9 AC006463.2-201ENST00000473326 348 ntBASIC6.52□□□□□ -1.37
UBE2OQ9C0C9 AC072052.1-201ENST00000496556 306 ntBASIC6.52□□□□□ -1.37
UBE2OQ9C0C9 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC6.52□□□□□ -1.37
UBE2OQ9C0C9 AC098799.3-201ENST00000506095 438 ntBASIC6.52□□□□□ -1.37
UBE2OQ9C0C9 RFPL4AP3-201ENST00000515267 345 ntBASIC6.52□□□□□ -1.37
UBE2OQ9C0C9 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.52□□□□□ -1.37
UBE2OQ9C0C9 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC6.52□□□□□ -1.37
UBE2OQ9C0C9 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.52□□□□□ -1.37
UBE2OQ9C0C9 AC034105.3-201ENST00000565294 442 ntBASIC6.52□□□□□ -1.37
UBE2OQ9C0C9 MIR4646-201ENST00000580775 63 ntBASIC6.52□□□□□ -1.37
UBE2OQ9C0C9 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC6.52□□□□□ -1.37
UBE2OQ9C0C9 MIR548Y-201ENST00000582739 110 ntBASIC6.52□□□□□ -1.37
UBE2OQ9C0C9 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.52□□□□□ -1.37
UBE2OQ9C0C9 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.52□□□□□ -1.37
UBE2OQ9C0C9 CKS1BP3-201ENST00000600888 237 ntBASIC6.52□□□□□ -1.37
UBE2OQ9C0C9 AC008638.3-201ENST00000603341 463 ntBASIC6.52□□□□□ -1.37
UBE2OQ9C0C9 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.52□□□□□ -1.37
UBE2OQ9C0C9 AC004853.1-201ENST00000604902 698 ntBASIC6.52□□□□□ -1.37
UBE2OQ9C0C9 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.52□□□□□ -1.37
UBE2OQ9C0C9 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.52□□□□□ -1.37
UBE2OQ9C0C9 AC090971.5-201ENST00000621102 293 ntBASIC6.52□□□□□ -1.37
UBE2OQ9C0C9 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
UBE2OQ9C0C9 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
UBE2OQ9C0C9 AL137058.3-201ENST00000624531 3099 ntBASIC6.52□□□□□ -1.37
UBE2OQ9C0C9 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.52□□□□□ -1.37
UBE2OQ9C0C9 NMD3P1-201ENST00000439704 1488 ntBASIC6.52□□□□□ -1.37
UBE2OQ9C0C9 AFP-201ENST00000226359 1914 ntTSL 5 BASIC6.52□□□□□ -1.37
UBE2OQ9C0C9 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
UBE2OQ9C0C9 AC025470.1-201ENST00000510053 2032 ntBASIC6.52□□□□□ -1.37
UBE2OQ9C0C9 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.52□□□□□ -1.37
UBE2OQ9C0C9 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.52□□□□□ -1.37
UBE2OQ9C0C9 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
UBE2OQ9C0C9 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.51□□□□□ -1.37
UBE2OQ9C0C9 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
UBE2OQ9C0C9 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
UBE2OQ9C0C9 AC024587.1-201ENST00000505925 2157 ntBASIC6.51□□□□□ -1.37
UBE2OQ9C0C9 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
UBE2OQ9C0C9 AC105749.1-201ENST00000631338 2008 ntBASIC6.51□□□□□ -1.37
UBE2OQ9C0C9 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
UBE2OQ9C0C9 SNORD8-201ENST00000363915 110 ntBASIC6.51□□□□□ -1.37
UBE2OQ9C0C9 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
UBE2OQ9C0C9 MIR765-201ENST00000390226 114 ntBASIC6.51□□□□□ -1.37
UBE2OQ9C0C9 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
UBE2OQ9C0C9 RN7SKP140-201ENST00000411196 284 ntBASIC6.51□□□□□ -1.37
UBE2OQ9C0C9 AC016397.1-201ENST00000412463 242 ntBASIC6.51□□□□□ -1.37
UBE2OQ9C0C9 FAR2P2-201ENST00000413041 594 ntBASIC6.51□□□□□ -1.37
UBE2OQ9C0C9 AC073136.2-201ENST00000417282 849 ntBASIC6.51□□□□□ -1.37
UBE2OQ9C0C9 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.51□□□□□ -1.37
UBE2OQ9C0C9 FAR2P4-202ENST00000425399 584 ntBASIC6.51□□□□□ -1.37
UBE2OQ9C0C9 RPS27AP6-201ENST00000427962 448 ntBASIC6.51□□□□□ -1.37
UBE2OQ9C0C9 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC6.51□□□□□ -1.37
UBE2OQ9C0C9 MTND6P18-201ENST00000439477 513 ntBASIC6.51□□□□□ -1.37
UBE2OQ9C0C9 TXNP5-201ENST00000441043 315 ntBASIC6.51□□□□□ -1.37
UBE2OQ9C0C9 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC6.51□□□□□ -1.37
UBE2OQ9C0C9 MTCO1P42-201ENST00000457379 726 ntBASIC6.51□□□□□ -1.37
UBE2OQ9C0C9 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC6.51□□□□□ -1.37
UBE2OQ9C0C9 MEMO1P3-201ENST00000459811 302 ntBASIC6.51□□□□□ -1.37
UBE2OQ9C0C9 RN7SL583P-201ENST00000475692 287 ntBASIC6.51□□□□□ -1.37
UBE2OQ9C0C9 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.51□□□□□ -1.37
UBE2OQ9C0C9 SNORA48.10-201ENST00000516965 160 ntBASIC6.51□□□□□ -1.37
UBE2OQ9C0C9 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC6.51□□□□□ -1.37
UBE2OQ9C0C9 OR5B19P-201ENST00000531766 928 ntBASIC6.51□□□□□ -1.37
UBE2OQ9C0C9 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms