Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC1.86□□□□□ -2.11
LCE3DQ9BYE3 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
LCE3DQ9BYE3 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC1.86□□□□□ -2.11
LCE3DQ9BYE3 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
LCE3DQ9BYE3 RMST-209ENST00000639542 3269 ntTSL 5 BASIC1.86□□□□□ -2.11
LCE3DQ9BYE3 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
LCE3DQ9BYE3 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC1.86□□□□□ -2.11
LCE3DQ9BYE3 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
LCE3DQ9BYE3 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
LCE3DQ9BYE3 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
LCE3DQ9BYE3 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
LCE3DQ9BYE3 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
LCE3DQ9BYE3 AL133464.1-201ENST00000635130 1705 ntTSL 5 BASIC1.86□□□□□ -2.11
LCE3DQ9BYE3 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
LCE3DQ9BYE3 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
LCE3DQ9BYE3 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 AP000547.3-204ENST00000588548 2523 ntBASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 LINC01963-201ENST00000562038 3148 ntBASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 ERMARD-205ENST00000418781 1841 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 AC009120.2-204ENST00000621548 2032 ntBASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 NGDN-201ENST00000397154 2204 ntAPPRIS P3 TSL 1 (best) BASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 STAG3L4-201ENST00000352103 530 ntBASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 RPL32P3-201ENST00000359025 275 ntBASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 ST3GAL3-211ENST00000361812 513 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 Y_RNA.5-201ENST00000362334 102 ntBASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 RNA5SP65-201ENST00000363166 119 ntBASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 RNA5SP350-201ENST00000363298 111 ntBASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 RNA5SP78-201ENST00000364622 118 ntBASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 RNA5SP172-201ENST00000365061 118 ntBASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 RNU1-115P-201ENST00000365329 160 ntBASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 RNA5SP238-201ENST00000365464 120 ntBASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 RN7SKP1-201ENST00000365525 307 ntBASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 RGS8-203ENST00000367557 859 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 RNU6-432P-201ENST00000384196 109 ntBASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 SNORA70.9-201ENST00000384370 135 ntBASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 SNORA24.1-201ENST00000384401 135 ntBASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 RNU6-1127P-201ENST00000384580 107 ntBASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 Y_RNA.556-201ENST00000384677 113 ntBASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 RNU6-550P-201ENST00000391057 101 ntBASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 PHBP1-201ENST00000392260 808 ntBASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 ENSAP1-201ENST00000392855 326 ntBASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 AC092952.1-201ENST00000397646 1209 ntBASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 DBIP1-201ENST00000401435 260 ntBASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 MRPL42P3-201ENST00000401492 326 ntBASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 AL353151.1-201ENST00000402406 604 ntBASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 AL391417.1-201ENST00000404100 426 ntBASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 RNU2-36P-201ENST00000410361 191 ntBASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 RNU4-65P-201ENST00000410473 140 ntBASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 RNU2-50P-201ENST00000410494 143 ntBASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 RNA5SP107-201ENST00000411358 122 ntBASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 RNU6-516P-201ENST00000411381 104 ntBASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 BX323014.1-201ENST00000412876 237 ntBASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 TAC3-205ENST00000415231 588 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 AC023141.10-201ENST00000415634 200 ntBASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 RPLP0P7-201ENST00000416050 667 ntBASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 AC009302.1-201ENST00000417147 390 ntBASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 MCFD2P1-201ENST00000417812 300 ntBASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 LINC01980-202ENST00000425195 491 ntTSL 3 BASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 AC018804.1-201ENST00000430381 618 ntBASIC1.85□□□□□ -2.11
LCE3DQ9BYE3 CHCHD4P2-201ENST00000431135 420 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms