Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 AC244505.3-201ENST00000454598 187 ntBASIC5.33□□□□□ -1.56
SALL3Q9BXA9 NDUFA12P1-201ENST00000455914 406 ntBASIC5.33□□□□□ -1.56
SALL3Q9BXA9 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC5.33□□□□□ -1.56
SALL3Q9BXA9 RNU7-125P-201ENST00000458760 62 ntBASIC5.33□□□□□ -1.56
SALL3Q9BXA9 RPL35AP15-201ENST00000468042 339 ntBASIC5.33□□□□□ -1.56
SALL3Q9BXA9 SYPL1P1-201ENST00000473622 768 ntBASIC5.33□□□□□ -1.56
SALL3Q9BXA9 RN7SL41P-201ENST00000476144 297 ntBASIC5.33□□□□□ -1.56
SALL3Q9BXA9 RN7SL481P-201ENST00000477764 299 ntBASIC5.33□□□□□ -1.56
SALL3Q9BXA9 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SALL3Q9BXA9 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.33□□□□□ -1.56
SALL3Q9BXA9 AC080014.1-201ENST00000496877 1201 ntBASIC5.33□□□□□ -1.56
SALL3Q9BXA9 AC021146.7-201ENST00000509604 775 ntBASIC5.33□□□□□ -1.56
SALL3Q9BXA9 AC119751.1-201ENST00000513357 765 ntBASIC5.33□□□□□ -1.56
SALL3Q9BXA9 RNU6-232P-201ENST00000517144 64 ntBASIC5.33□□□□□ -1.56
SALL3Q9BXA9 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC5.33□□□□□ -1.56
SALL3Q9BXA9 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC5.33□□□□□ -1.56
SALL3Q9BXA9 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.33□□□□□ -1.56
SALL3Q9BXA9 C1GALT1P3-201ENST00000522049 819 ntBASIC5.33□□□□□ -1.56
SALL3Q9BXA9 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SALL3Q9BXA9 AC007115.1-201ENST00000546853 234 ntBASIC5.33□□□□□ -1.56
SALL3Q9BXA9 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SALL3Q9BXA9 AC010546.1-201ENST00000569391 485 ntBASIC5.33□□□□□ -1.56
SALL3Q9BXA9 AC090616.2-202ENST00000584248 222 ntBASIC5.33□□□□□ -1.56
SALL3Q9BXA9 AC021749.1-201ENST00000604322 607 ntBASIC5.33□□□□□ -1.56
SALL3Q9BXA9 AC009237.15-201ENST00000610252 501 ntBASIC5.33□□□□□ -1.56
SALL3Q9BXA9 AL121890.3-201ENST00000618494 516 ntBASIC5.33□□□□□ -1.56
SALL3Q9BXA9 AL445363.3-201ENST00000623080 671 ntBASIC5.33□□□□□ -1.56
SALL3Q9BXA9 AC019278.1-201ENST00000623516 479 ntBASIC5.33□□□□□ -1.56
SALL3Q9BXA9 AL359740.1-201ENST00000624340 592 ntBASIC5.33□□□□□ -1.56
SALL3Q9BXA9 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5.33□□□□□ -1.56
SALL3Q9BXA9 AC008013.2-202ENST00000637965 364 ntBASIC5.33□□□□□ -1.56
SALL3Q9BXA9 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SALL3Q9BXA9 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
SALL3Q9BXA9 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SALL3Q9BXA9 EIF2AP4-201ENST00000424793 1781 ntBASIC5.33□□□□□ -1.56
SALL3Q9BXA9 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SALL3Q9BXA9 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
SALL3Q9BXA9 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.33□□□□□ -1.56
SALL3Q9BXA9 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.33□□□□□ -1.56
SALL3Q9BXA9 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SALL3Q9BXA9 AC111188.2-201ENST00000529697 1387 ntBASIC5.33□□□□□ -1.56
SALL3Q9BXA9 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SALL3Q9BXA9 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.32□□□□□ -1.56
SALL3Q9BXA9 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SALL3Q9BXA9 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
SALL3Q9BXA9 RSL24D1P4-201ENST00000400938 484 ntBASIC5.32□□□□□ -1.56
SALL3Q9BXA9 SNORA11F-201ENST00000408237 128 ntBASIC5.32□□□□□ -1.56
SALL3Q9BXA9 MOB4-205ENST00000409916 829 ntTSL 3 BASIC5.32□□□□□ -1.56
SALL3Q9BXA9 AF274854.1-201ENST00000413236 615 ntBASIC5.32□□□□□ -1.56
SALL3Q9BXA9 ZNF736P2Y-201ENST00000416040 1279 ntBASIC5.32□□□□□ -1.56
SALL3Q9BXA9 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.32□□□□□ -1.56
SALL3Q9BXA9 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC5.32□□□□□ -1.56
SALL3Q9BXA9 HSPE1P16-201ENST00000426640 348 ntBASIC5.32□□□□□ -1.56
SALL3Q9BXA9 ETF1P3-201ENST00000430422 1160 ntBASIC5.32□□□□□ -1.56
SALL3Q9BXA9 AC005189.1-201ENST00000431286 310 ntBASIC5.32□□□□□ -1.56
SALL3Q9BXA9 MTND2P20-201ENST00000440805 661 ntBASIC5.32□□□□□ -1.56
SALL3Q9BXA9 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SALL3Q9BXA9 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC5.32□□□□□ -1.56
SALL3Q9BXA9 AC068135.1-201ENST00000446164 246 ntBASIC5.32□□□□□ -1.56
SALL3Q9BXA9 OR51B8P-201ENST00000449892 769 ntBASIC5.32□□□□□ -1.56
SALL3Q9BXA9 RN7SL98P-201ENST00000462271 300 ntBASIC5.32□□□□□ -1.56
SALL3Q9BXA9 BZW1P2-201ENST00000473537 826 ntBASIC5.32□□□□□ -1.56
SALL3Q9BXA9 AC069528.1-202ENST00000482888 637 ntBASIC5.32□□□□□ -1.56
SALL3Q9BXA9 AC012158.1-204ENST00000483430 465 ntBASIC5.32□□□□□ -1.56
SALL3Q9BXA9 AC023050.1-201ENST00000498198 304 ntBASIC5.32□□□□□ -1.56
SALL3Q9BXA9 PGBD4P4-201ENST00000509673 613 ntBASIC5.32□□□□□ -1.56
SALL3Q9BXA9 TCP11X3P-202ENST00000514289 1254 ntBASIC5.32□□□□□ -1.56
SALL3Q9BXA9 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.32□□□□□ -1.56
SALL3Q9BXA9 AC105185.1-201ENST00000518705 535 ntBASIC5.32□□□□□ -1.56
SALL3Q9BXA9 AC060788.1-201ENST00000521318 469 ntBASIC5.32□□□□□ -1.56
SALL3Q9BXA9 IGLVVI-25-1-201ENST00000521893 249 ntBASIC5.32□□□□□ -1.56
SALL3Q9BXA9 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC5.32□□□□□ -1.56
SALL3Q9BXA9 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SALL3Q9BXA9 NBEAP1-201ENST00000554452 979 ntBASIC5.32□□□□□ -1.56
SALL3Q9BXA9 AC018552.1-201ENST00000562099 811 ntBASIC5.32□□□□□ -1.56
SALL3Q9BXA9 MIR4330-201ENST00000579077 105 ntBASIC5.32□□□□□ -1.56
SALL3Q9BXA9 MIR4801-201ENST00000582704 82 ntBASIC5.32□□□□□ -1.56
SALL3Q9BXA9 AC022069.1-201ENST00000582910 658 ntBASIC5.32□□□□□ -1.56
SALL3Q9BXA9 BMS1P7-201ENST00000602440 1052 ntBASIC5.32□□□□□ -1.56
SALL3Q9BXA9 AC113403.1-201ENST00000604910 193 ntBASIC5.32□□□□□ -1.56
SALL3Q9BXA9 AC090948.1-201ENST00000607464 549 ntBASIC5.32□□□□□ -1.56
SALL3Q9BXA9 AP003392.5-201ENST00000607857 415 ntBASIC5.32□□□□□ -1.56
SALL3Q9BXA9 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC5.32□□□□□ -1.56
SALL3Q9BXA9 AL138721.1-201ENST00000616756 179 ntBASIC5.32□□□□□ -1.56
SALL3Q9BXA9 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
SALL3Q9BXA9 AC092192.1-201ENST00000633154 1018 ntBASIC5.32□□□□□ -1.56
SALL3Q9BXA9 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SALL3Q9BXA9 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.32□□□□□ -1.56
SALL3Q9BXA9 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SALL3Q9BXA9 AL022311.1-201ENST00000623726 19416 ntBASIC5.32□□□□□ -1.56
SALL3Q9BXA9 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
SALL3Q9BXA9 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.32□□□□□ -1.56
SALL3Q9BXA9 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SALL3Q9BXA9 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
SALL3Q9BXA9 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SALL3Q9BXA9 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC5.31□□□□□ -1.56
SALL3Q9BXA9 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
SALL3Q9BXA9 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
SALL3Q9BXA9 RNU1-87P-201ENST00000363727 170 ntBASIC5.31□□□□□ -1.56
SALL3Q9BXA9 AL021407.1-201ENST00000404531 386 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms