Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 RPL23AP71-201ENST00000470966 469 ntBASIC4.1□□□□□ -1.75
CCM2Q9BSQ5 AC106872.2-201ENST00000494303 480 ntBASIC4.1□□□□□ -1.75
CCM2Q9BSQ5 AL035404.1-201ENST00000497982 568 ntBASIC4.1□□□□□ -1.75
CCM2Q9BSQ5 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC4.1□□□□□ -1.75
CCM2Q9BSQ5 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.1□□□□□ -1.75
CCM2Q9BSQ5 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.1□□□□□ -1.75
CCM2Q9BSQ5 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.1□□□□□ -1.75
CCM2Q9BSQ5 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.1□□□□□ -1.75
CCM2Q9BSQ5 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.1□□□□□ -1.75
CCM2Q9BSQ5 AC124068.1-201ENST00000563131 678 ntBASIC4.1□□□□□ -1.75
CCM2Q9BSQ5 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CCM2Q9BSQ5 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.1□□□□□ -1.75
CCM2Q9BSQ5 AC022655.2-201ENST00000577280 318 ntBASIC4.1□□□□□ -1.75
CCM2Q9BSQ5 MIR4697-201ENST00000582977 78 ntBASIC4.1□□□□□ -1.75
CCM2Q9BSQ5 AC069366.1-201ENST00000583159 838 ntBASIC4.1□□□□□ -1.75
CCM2Q9BSQ5 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.1□□□□□ -1.75
CCM2Q9BSQ5 MIR432-201ENST00000606207 94 ntBASIC4.1□□□□□ -1.75
CCM2Q9BSQ5 AC006946.3-201ENST00000609791 756 ntBASIC4.1□□□□□ -1.75
CCM2Q9BSQ5 AC093875.1-201ENST00000623688 504 ntBASIC4.1□□□□□ -1.75
CCM2Q9BSQ5 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCM2Q9BSQ5 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCM2Q9BSQ5 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
CCM2Q9BSQ5 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
CCM2Q9BSQ5 MARK2P15-201ENST00000432204 2186 ntBASIC4.1□□□□□ -1.75
CCM2Q9BSQ5 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCM2Q9BSQ5 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCM2Q9BSQ5 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.1□□□□□ -1.75
CCM2Q9BSQ5 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCM2Q9BSQ5 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCM2Q9BSQ5 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCM2Q9BSQ5 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.1□□□□□ -1.75
CCM2Q9BSQ5 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCM2Q9BSQ5 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CCM2Q9BSQ5 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCM2Q9BSQ5 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCM2Q9BSQ5 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCM2Q9BSQ5 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCM2Q9BSQ5 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
CCM2Q9BSQ5 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
CCM2Q9BSQ5 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCM2Q9BSQ5 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CCM2Q9BSQ5 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.09□□□□□ -1.75
CCM2Q9BSQ5 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCM2Q9BSQ5 HMGB3P19-201ENST00000403971 560 ntBASIC4.09□□□□□ -1.75
CCM2Q9BSQ5 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.09□□□□□ -1.75
CCM2Q9BSQ5 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.09□□□□□ -1.75
CCM2Q9BSQ5 NIPA2P1-201ENST00000426223 976 ntBASIC4.09□□□□□ -1.75
CCM2Q9BSQ5 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.09□□□□□ -1.75
CCM2Q9BSQ5 RSL24D1P6-201ENST00000426934 401 ntBASIC4.09□□□□□ -1.75
CCM2Q9BSQ5 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.09□□□□□ -1.75
CCM2Q9BSQ5 RPS7P5-201ENST00000441482 581 ntBASIC4.09□□□□□ -1.75
CCM2Q9BSQ5 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC4.09□□□□□ -1.75
CCM2Q9BSQ5 RAD23BP3-201ENST00000454157 1152 ntBASIC4.09□□□□□ -1.75
CCM2Q9BSQ5 RPL21P18-201ENST00000469899 480 ntBASIC4.09□□□□□ -1.75
CCM2Q9BSQ5 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.09□□□□□ -1.75
CCM2Q9BSQ5 AC025445.1-201ENST00000502728 300 ntBASIC4.09□□□□□ -1.75
CCM2Q9BSQ5 FTH1P9-201ENST00000513251 355 ntBASIC4.09□□□□□ -1.75
CCM2Q9BSQ5 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.09□□□□□ -1.75
CCM2Q9BSQ5 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.09□□□□□ -1.75
CCM2Q9BSQ5 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC4.09□□□□□ -1.75
CCM2Q9BSQ5 HMGB1P1-201ENST00000522557 636 ntBASIC4.09□□□□□ -1.75
CCM2Q9BSQ5 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.09□□□□□ -1.75
CCM2Q9BSQ5 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.09□□□□□ -1.75
CCM2Q9BSQ5 AC087894.1-201ENST00000538359 518 ntBASIC4.09□□□□□ -1.75
CCM2Q9BSQ5 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.09□□□□□ -1.75
CCM2Q9BSQ5 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.09□□□□□ -1.75
CCM2Q9BSQ5 CYB5AP5-201ENST00000549779 389 ntBASIC4.09□□□□□ -1.75
CCM2Q9BSQ5 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC4.09□□□□□ -1.75
CCM2Q9BSQ5 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.09□□□□□ -1.75
CCM2Q9BSQ5 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.09□□□□□ -1.75
CCM2Q9BSQ5 AC025884.1-201ENST00000556034 378 ntBASIC4.09□□□□□ -1.75
CCM2Q9BSQ5 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
CCM2Q9BSQ5 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.09□□□□□ -1.75
CCM2Q9BSQ5 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.09□□□□□ -1.75
CCM2Q9BSQ5 MIR4789-201ENST00000577469 82 ntBASIC4.09□□□□□ -1.75
CCM2Q9BSQ5 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.09□□□□□ -1.75
CCM2Q9BSQ5 PCNAP1-202ENST00000595299 752 ntBASIC4.09□□□□□ -1.75
CCM2Q9BSQ5 AL139395.1-201ENST00000603662 160 ntBASIC4.09□□□□□ -1.75
CCM2Q9BSQ5 AC092653.1-201ENST00000608509 531 ntBASIC4.09□□□□□ -1.75
CCM2Q9BSQ5 AC018645.2-201ENST00000609151 472 ntBASIC4.09□□□□□ -1.75
CCM2Q9BSQ5 AC005156.1-201ENST00000613371 573 ntBASIC4.09□□□□□ -1.75
CCM2Q9BSQ5 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CCM2Q9BSQ5 AC090506.2-201ENST00000624521 419 ntBASIC4.09□□□□□ -1.75
CCM2Q9BSQ5 AC010608.2-201ENST00000624830 470 ntBASIC4.09□□□□□ -1.75
CCM2Q9BSQ5 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.09□□□□□ -1.75
CCM2Q9BSQ5 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.09□□□□□ -1.75
CCM2Q9BSQ5 MIR492-201ENST00000638676 116 ntBASIC4.09□□□□□ -1.75
CCM2Q9BSQ5 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCM2Q9BSQ5 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
CCM2Q9BSQ5 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.09□□□□□ -1.75
CCM2Q9BSQ5 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.09□□□□□ -1.76
CCM2Q9BSQ5 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.76
CCM2Q9BSQ5 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.08□□□□□ -1.76
CCM2Q9BSQ5 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
CCM2Q9BSQ5 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCM2Q9BSQ5 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCM2Q9BSQ5 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCM2Q9BSQ5 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCM2Q9BSQ5 SNORD74.4-201ENST00000364129 80 ntBASIC4.08□□□□□ -1.76
CCM2Q9BSQ5 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms