Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SNX18Q96RF0 AL356266.1-201ENST00000623311 483 ntBASIC4.67□□□□□ -1.66
SNX18Q96RF0 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
SNX18Q96RF0 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.67□□□□□ -1.66
SNX18Q96RF0 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SNX18Q96RF0 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
SNX18Q96RF0 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SNX18Q96RF0 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SNX18Q96RF0 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
SNX18Q96RF0 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
SNX18Q96RF0 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SNX18Q96RF0 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SNX18Q96RF0 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SNX18Q96RF0 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.66□□□□□ -1.66
SNX18Q96RF0 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
SNX18Q96RF0 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.66□□□□□ -1.66
SNX18Q96RF0 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SNX18Q96RF0 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
SNX18Q96RF0 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
SNX18Q96RF0 Y_RNA.3-201ENST00000362331 103 ntBASIC4.66□□□□□ -1.66
SNX18Q96RF0 RNA5SP28-201ENST00000363841 119 ntBASIC4.66□□□□□ -1.66
SNX18Q96RF0 RNU6-1151P-201ENST00000384684 107 ntBASIC4.66□□□□□ -1.66
SNX18Q96RF0 RNA5SP339-201ENST00000390987 122 ntBASIC4.66□□□□□ -1.66
SNX18Q96RF0 DEFB108C-201ENST00000400154 252 ntBASIC4.66□□□□□ -1.66
SNX18Q96RF0 CYCSP45-201ENST00000402289 315 ntBASIC4.66□□□□□ -1.66
SNX18Q96RF0 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.66□□□□□ -1.66
SNX18Q96RF0 RNU2-65P-201ENST00000410162 185 ntBASIC4.66□□□□□ -1.66
SNX18Q96RF0 RNU2-16P-201ENST00000410712 136 ntBASIC4.66□□□□□ -1.66
SNX18Q96RF0 AC068533.2-201ENST00000411872 306 ntBASIC4.66□□□□□ -1.66
SNX18Q96RF0 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.66□□□□□ -1.66
SNX18Q96RF0 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.66□□□□□ -1.66
SNX18Q96RF0 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.66□□□□□ -1.66
SNX18Q96RF0 RPS26P40-201ENST00000435209 294 ntBASIC4.66□□□□□ -1.66
SNX18Q96RF0 PTMAP6-201ENST00000439110 327 ntBASIC4.66□□□□□ -1.66
SNX18Q96RF0 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.66□□□□□ -1.66
SNX18Q96RF0 TRIM60P18-201ENST00000441518 828 ntBASIC4.66□□□□□ -1.66
SNX18Q96RF0 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.66□□□□□ -1.66
SNX18Q96RF0 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.66□□□□□ -1.66
SNX18Q96RF0 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC4.66□□□□□ -1.66
SNX18Q96RF0 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC4.66□□□□□ -1.66
SNX18Q96RF0 RN7SL172P-201ENST00000460535 303 ntBASIC4.66□□□□□ -1.66
SNX18Q96RF0 AC024558.1-201ENST00000505008 528 ntBASIC4.66□□□□□ -1.66
SNX18Q96RF0 AC097173.1-201ENST00000505862 819 ntBASIC4.66□□□□□ -1.66
SNX18Q96RF0 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.66□□□□□ -1.66
SNX18Q96RF0 RNY4P37-201ENST00000516225 96 ntBASIC4.66□□□□□ -1.66
SNX18Q96RF0 RNU6-347P-201ENST00000516658 105 ntBASIC4.66□□□□□ -1.66
SNX18Q96RF0 RNA5SP373-201ENST00000517271 95 ntBASIC4.66□□□□□ -1.66
SNX18Q96RF0 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.66□□□□□ -1.66
SNX18Q96RF0 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC4.66□□□□□ -1.66
SNX18Q96RF0 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC4.66□□□□□ -1.66
SNX18Q96RF0 AP002963.1-201ENST00000530590 184 ntBASIC4.66□□□□□ -1.66
SNX18Q96RF0 OR7K1P-201ENST00000546439 926 ntBASIC4.66□□□□□ -1.66
SNX18Q96RF0 HAUS8P1-201ENST00000549005 542 ntBASIC4.66□□□□□ -1.66
SNX18Q96RF0 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC4.66□□□□□ -1.66
SNX18Q96RF0 PCNPP1-201ENST00000552501 511 ntBASIC4.66□□□□□ -1.66
SNX18Q96RF0 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SNX18Q96RF0 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC4.66□□□□□ -1.66
SNX18Q96RF0 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.66□□□□□ -1.66
SNX18Q96RF0 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
SNX18Q96RF0 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
SNX18Q96RF0 AC079089.3-201ENST00000603094 673 ntBASIC4.66□□□□□ -1.66
SNX18Q96RF0 AC091946.2-201ENST00000606105 291 ntBASIC4.66□□□□□ -1.66
SNX18Q96RF0 DLEU2_1.1-201ENST00000612089 120 ntBASIC4.66□□□□□ -1.66
SNX18Q96RF0 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SNX18Q96RF0 DLEU2_1.2-201ENST00000614667 120 ntBASIC4.66□□□□□ -1.66
SNX18Q96RF0 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.66□□□□□ -1.66
SNX18Q96RF0 AC234782.5-201ENST00000617723 324 ntBASIC4.66□□□□□ -1.66
SNX18Q96RF0 AC009237.17-201ENST00000618111 748 ntBASIC4.66□□□□□ -1.66
SNX18Q96RF0 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC4.66□□□□□ -1.66
SNX18Q96RF0 AC009509.4-201ENST00000619202 509 ntBASIC4.66□□□□□ -1.66
SNX18Q96RF0 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SNX18Q96RF0 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SNX18Q96RF0 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
SNX18Q96RF0 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.66□□□□□ -1.66
SNX18Q96RF0 TLK1P1-201ENST00000456760 2440 ntBASIC4.66□□□□□ -1.66
SNX18Q96RF0 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
SNX18Q96RF0 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.66□□□□□ -1.66
SNX18Q96RF0 AC092747.4-201ENST00000620519 1861 ntBASIC4.66□□□□□ -1.66
SNX18Q96RF0 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
SNX18Q96RF0 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.66□□□□□ -1.66
SNX18Q96RF0 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SNX18Q96RF0 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.66□□□□□ -1.66
SNX18Q96RF0 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
SNX18Q96RF0 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
SNX18Q96RF0 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
SNX18Q96RF0 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
SNX18Q96RF0 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
SNX18Q96RF0 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.65□□□□□ -1.66
SNX18Q96RF0 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
SNX18Q96RF0 CDR1-202ENST00000625883 1485 ntBASIC4.65□□□□□ -1.66
SNX18Q96RF0 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SNX18Q96RF0 RNU6-517P-201ENST00000384362 110 ntBASIC4.65□□□□□ -1.67
SNX18Q96RF0 RNU6-1215P-201ENST00000384441 102 ntBASIC4.65□□□□□ -1.67
SNX18Q96RF0 MIR105-1-201ENST00000385222 81 ntBASIC4.65□□□□□ -1.67
SNX18Q96RF0 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
SNX18Q96RF0 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
SNX18Q96RF0 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SNX18Q96RF0 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.65□□□□□ -1.67
SNX18Q96RF0 AL136133.1-201ENST00000413694 376 ntBASIC4.65□□□□□ -1.67
SNX18Q96RF0 UBE2V1P10-201ENST00000414685 269 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms