Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RTN4IP1Q8WWV3 SPRR2C-201ENST00000290702 219 ntBASIC3.18□□□□□ -1.9
RTN4IP1Q8WWV3 RNU1-87P-201ENST00000363727 170 ntBASIC3.18□□□□□ -1.9
RTN4IP1Q8WWV3 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RTN4IP1Q8WWV3 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC3.18□□□□□ -1.9
RTN4IP1Q8WWV3 RNU1-13P-201ENST00000384499 162 ntBASIC3.18□□□□□ -1.9
RTN4IP1Q8WWV3 AL589655.1-201ENST00000405398 482 ntBASIC3.18□□□□□ -1.9
RTN4IP1Q8WWV3 RPL31P52-201ENST00000407532 367 ntBASIC3.18□□□□□ -1.9
RTN4IP1Q8WWV3 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.18□□□□□ -1.9
RTN4IP1Q8WWV3 AC127526.1-201ENST00000417526 366 ntBASIC3.18□□□□□ -1.9
RTN4IP1Q8WWV3 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.18□□□□□ -1.9
RTN4IP1Q8WWV3 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC3.18□□□□□ -1.9
RTN4IP1Q8WWV3 AC009965.2-201ENST00000425328 970 ntBASIC3.18□□□□□ -1.9
RTN4IP1Q8WWV3 NPM1P24-201ENST00000428039 894 ntBASIC3.18□□□□□ -1.9
RTN4IP1Q8WWV3 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.18□□□□□ -1.9
RTN4IP1Q8WWV3 AL606490.7-201ENST00000433136 191 ntBASIC3.18□□□□□ -1.9
RTN4IP1Q8WWV3 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RTN4IP1Q8WWV3 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.18□□□□□ -1.9
RTN4IP1Q8WWV3 AC006326.1-201ENST00000445465 787 ntBASIC3.18□□□□□ -1.9
RTN4IP1Q8WWV3 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.18□□□□□ -1.9
RTN4IP1Q8WWV3 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC3.18□□□□□ -1.9
RTN4IP1Q8WWV3 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.18□□□□□ -1.9
RTN4IP1Q8WWV3 AC084198.1-201ENST00000477747 402 ntBASIC3.18□□□□□ -1.9
RTN4IP1Q8WWV3 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC3.18□□□□□ -1.9
RTN4IP1Q8WWV3 HMGB1P3-201ENST00000502802 616 ntBASIC3.18□□□□□ -1.9
RTN4IP1Q8WWV3 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.18□□□□□ -1.9
RTN4IP1Q8WWV3 AC087369.1-201ENST00000520775 996 ntBASIC3.18□□□□□ -1.9
RTN4IP1Q8WWV3 YPEL5P3-201ENST00000547227 352 ntBASIC3.18□□□□□ -1.9
RTN4IP1Q8WWV3 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.18□□□□□ -1.9
RTN4IP1Q8WWV3 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.18□□□□□ -1.9
RTN4IP1Q8WWV3 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.18□□□□□ -1.9
RTN4IP1Q8WWV3 VN1R84P-201ENST00000593697 235 ntBASIC3.18□□□□□ -1.9
RTN4IP1Q8WWV3 AC005229.3-201ENST00000603438 323 ntBASIC3.18□□□□□ -1.9
RTN4IP1Q8WWV3 AC007423.1-201ENST00000605009 627 ntBASIC3.18□□□□□ -1.9
RTN4IP1Q8WWV3 AC010857.1-201ENST00000606398 594 ntBASIC3.18□□□□□ -1.9
RTN4IP1Q8WWV3 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC3.18□□□□□ -1.9
RTN4IP1Q8WWV3 AL118556.2-201ENST00000614375 824 ntBASIC3.18□□□□□ -1.9
RTN4IP1Q8WWV3 AC104307.1-201ENST00000616142 196 ntBASIC3.18□□□□□ -1.9
RTN4IP1Q8WWV3 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
RTN4IP1Q8WWV3 AL713922.2-201ENST00000619384 716 ntBASIC3.18□□□□□ -1.9
RTN4IP1Q8WWV3 U7.8-201ENST00000619968 63 ntBASIC3.18□□□□□ -1.9
RTN4IP1Q8WWV3 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC3.18□□□□□ -1.9
RTN4IP1Q8WWV3 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.18□□□□□ -1.9
RTN4IP1Q8WWV3 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RTN4IP1Q8WWV3 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.18□□□□□ -1.9
RTN4IP1Q8WWV3 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.18□□□□□ -1.9
RTN4IP1Q8WWV3 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RTN4IP1Q8WWV3 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RTN4IP1Q8WWV3 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RTN4IP1Q8WWV3 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.17□□□□□ -1.9
RTN4IP1Q8WWV3 MTCO1P14-201ENST00000441695 1559 ntBASIC3.17□□□□□ -1.9
RTN4IP1Q8WWV3 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.17□□□□□ -1.9
RTN4IP1Q8WWV3 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RTN4IP1Q8WWV3 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RTN4IP1Q8WWV3 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RTN4IP1Q8WWV3 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
RTN4IP1Q8WWV3 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.17□□□□□ -1.9
RTN4IP1Q8WWV3 RNU6-532P-201ENST00000384318 107 ntBASIC3.17□□□□□ -1.9
RTN4IP1Q8WWV3 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RTN4IP1Q8WWV3 CCNB2P1-201ENST00000399411 1150 ntBASIC3.17□□□□□ -1.9
RTN4IP1Q8WWV3 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC3.17□□□□□ -1.9
RTN4IP1Q8WWV3 AC114814.2-201ENST00000419195 485 ntBASIC3.17□□□□□ -1.9
RTN4IP1Q8WWV3 Z97055.1-201ENST00000419730 712 ntBASIC3.17□□□□□ -1.9
RTN4IP1Q8WWV3 AC002075.2-201ENST00000425207 252 ntBASIC3.17□□□□□ -1.9
RTN4IP1Q8WWV3 HIGD1AP12-201ENST00000427832 281 ntBASIC3.17□□□□□ -1.9
RTN4IP1Q8WWV3 RPS27AP12-201ENST00000429552 465 ntBASIC3.17□□□□□ -1.9
RTN4IP1Q8WWV3 MOB1AP1-201ENST00000430903 535 ntBASIC3.17□□□□□ -1.9
RTN4IP1Q8WWV3 MTND4LP7-201ENST00000431728 294 ntBASIC3.17□□□□□ -1.9
RTN4IP1Q8WWV3 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC3.17□□□□□ -1.9
RTN4IP1Q8WWV3 AL691517.1-201ENST00000440833 1235 ntBASIC3.17□□□□□ -1.9
RTN4IP1Q8WWV3 BTBD7P2-201ENST00000441962 620 ntBASIC3.17□□□□□ -1.9
RTN4IP1Q8WWV3 HSFY6P-201ENST00000445573 403 ntBASIC3.17□□□□□ -1.9
RTN4IP1Q8WWV3 AL162151.2-201ENST00000448875 158 ntBASIC3.17□□□□□ -1.9
RTN4IP1Q8WWV3 ANP32BP2-201ENST00000454525 545 ntBASIC3.17□□□□□ -1.9
RTN4IP1Q8WWV3 RPS3AP6-201ENST00000484430 795 ntBASIC3.17□□□□□ -1.9
RTN4IP1Q8WWV3 AC093770.1-201ENST00000511559 571 ntBASIC3.17□□□□□ -1.9
RTN4IP1Q8WWV3 MIR2116-201ENST00000517221 80 ntBASIC3.17□□□□□ -1.9
RTN4IP1Q8WWV3 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RTN4IP1Q8WWV3 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.17□□□□□ -1.9
RTN4IP1Q8WWV3 NPM1P47-201ENST00000560843 856 ntBASIC3.17□□□□□ -1.9
RTN4IP1Q8WWV3 AC023158.1-201ENST00000561632 1025 ntBASIC3.17□□□□□ -1.9
RTN4IP1Q8WWV3 HYKK-203ENST00000563233 734 ntTSL 2 BASIC3.17□□□□□ -1.9
RTN4IP1Q8WWV3 AC120057.2-201ENST00000571520 271 ntBASIC3.17□□□□□ -1.9
RTN4IP1Q8WWV3 AC136624.4-201ENST00000573044 370 ntBASIC3.17□□□□□ -1.9
RTN4IP1Q8WWV3 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.17□□□□□ -1.9
RTN4IP1Q8WWV3 AL592436.1-201ENST00000605135 558 ntBASIC3.17□□□□□ -1.9
RTN4IP1Q8WWV3 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.17□□□□□ -1.9
RTN4IP1Q8WWV3 RNVU1-4-201ENST00000612985 164 ntBASIC3.17□□□□□ -1.9
RTN4IP1Q8WWV3 AL354696.1-201ENST00000614652 497 ntBASIC3.17□□□□□ -1.9
RTN4IP1Q8WWV3 uc_338.9-201ENST00000617424 182 ntBASIC3.17□□□□□ -1.9
RTN4IP1Q8WWV3 MIR6500-201ENST00000622700 86 ntBASIC3.17□□□□□ -1.9
RTN4IP1Q8WWV3 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.17□□□□□ -1.9
RTN4IP1Q8WWV3 AC090229.1-201ENST00000590983 1609 ntBASIC3.17□□□□□ -1.9
RTN4IP1Q8WWV3 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RTN4IP1Q8WWV3 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
RTN4IP1Q8WWV3 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
RTN4IP1Q8WWV3 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.17□□□□□ -1.9
RTN4IP1Q8WWV3 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
RTN4IP1Q8WWV3 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.16□□□□□ -1.9
RTN4IP1Q8WWV3 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms