Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC3.99□□□□□ -1.77
NHLRC1Q6VVB1 CKS1BP5-201ENST00000434172 273 ntBASIC3.99□□□□□ -1.77
NHLRC1Q6VVB1 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.99□□□□□ -1.77
NHLRC1Q6VVB1 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.99□□□□□ -1.77
NHLRC1Q6VVB1 RAB11AP1-201ENST00000442978 646 ntBASIC3.99□□□□□ -1.77
NHLRC1Q6VVB1 NDUFA5P7-201ENST00000452914 242 ntBASIC3.99□□□□□ -1.77
NHLRC1Q6VVB1 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.99□□□□□ -1.77
NHLRC1Q6VVB1 HMGB3P30-201ENST00000457863 606 ntBASIC3.99□□□□□ -1.77
NHLRC1Q6VVB1 RN7SL860P-201ENST00000473738 223 ntBASIC3.99□□□□□ -1.77
NHLRC1Q6VVB1 AC108022.1-201ENST00000493466 478 ntBASIC3.99□□□□□ -1.77
NHLRC1Q6VVB1 AC108145.1-201ENST00000503770 153 ntBASIC3.99□□□□□ -1.77
NHLRC1Q6VVB1 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
NHLRC1Q6VVB1 AC018797.3-201ENST00000513388 1241 ntBASIC3.99□□□□□ -1.77
NHLRC1Q6VVB1 RNA5SP135-201ENST00000517019 125 ntBASIC3.99□□□□□ -1.77
NHLRC1Q6VVB1 MYL12AP1-201ENST00000518490 515 ntBASIC3.99□□□□□ -1.77
NHLRC1Q6VVB1 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.99□□□□□ -1.77
NHLRC1Q6VVB1 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC3.99□□□□□ -1.77
NHLRC1Q6VVB1 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC3.99□□□□□ -1.77
NHLRC1Q6VVB1 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.99□□□□□ -1.77
NHLRC1Q6VVB1 AC090666.1-201ENST00000578241 445 ntBASIC3.99□□□□□ -1.77
NHLRC1Q6VVB1 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC3.99□□□□□ -1.77
NHLRC1Q6VVB1 AC008782.1-201ENST00000603386 430 ntBASIC3.99□□□□□ -1.77
NHLRC1Q6VVB1 AC103792.1-201ENST00000603591 919 ntBASIC3.99□□□□□ -1.77
NHLRC1Q6VVB1 AC112230.1-201ENST00000604342 547 ntBASIC3.99□□□□□ -1.77
NHLRC1Q6VVB1 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.99□□□□□ -1.77
NHLRC1Q6VVB1 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC3.99□□□□□ -1.77
NHLRC1Q6VVB1 AC097504.2-201ENST00000608088 454 ntBASIC3.99□□□□□ -1.77
NHLRC1Q6VVB1 AL354760.1-201ENST00000608357 643 ntBASIC3.99□□□□□ -1.77
NHLRC1Q6VVB1 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.99□□□□□ -1.77
NHLRC1Q6VVB1 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
NHLRC1Q6VVB1 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC3.99□□□□□ -1.77
NHLRC1Q6VVB1 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
NHLRC1Q6VVB1 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
NHLRC1Q6VVB1 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
NHLRC1Q6VVB1 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
NHLRC1Q6VVB1 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NHLRC1Q6VVB1 AC012618.3-205ENST00000637896 1496 ntBASIC3.98□□□□□ -1.77
NHLRC1Q6VVB1 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
NHLRC1Q6VVB1 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.98□□□□□ -1.77
NHLRC1Q6VVB1 OR56B2P-202ENST00000641377 2453 ntBASIC3.98□□□□□ -1.77
NHLRC1Q6VVB1 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC3.98□□□□□ -1.77
NHLRC1Q6VVB1 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
NHLRC1Q6VVB1 RNA5SP307-201ENST00000362863 116 ntBASIC3.98□□□□□ -1.77
NHLRC1Q6VVB1 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC3.98□□□□□ -1.77
NHLRC1Q6VVB1 RNU6-441P-201ENST00000384545 106 ntBASIC3.98□□□□□ -1.77
NHLRC1Q6VVB1 MIR513A2-201ENST00000385249 127 ntBASIC3.98□□□□□ -1.77
NHLRC1Q6VVB1 MTCO3P31-201ENST00000405526 789 ntBASIC3.98□□□□□ -1.77
NHLRC1Q6VVB1 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
NHLRC1Q6VVB1 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.98□□□□□ -1.77
NHLRC1Q6VVB1 MTCYBP24-201ENST00000420387 1106 ntBASIC3.98□□□□□ -1.77
NHLRC1Q6VVB1 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC3.98□□□□□ -1.77
NHLRC1Q6VVB1 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.98□□□□□ -1.77
NHLRC1Q6VVB1 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NHLRC1Q6VVB1 AC092017.2-201ENST00000427600 362 ntBASIC3.98□□□□□ -1.77
NHLRC1Q6VVB1 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.98□□□□□ -1.77
NHLRC1Q6VVB1 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.98□□□□□ -1.77
NHLRC1Q6VVB1 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.98□□□□□ -1.77
NHLRC1Q6VVB1 AL590399.6-201ENST00000446396 307 ntBASIC3.98□□□□□ -1.77
NHLRC1Q6VVB1 RPL7P59-201ENST00000447700 943 ntBASIC3.98□□□□□ -1.77
NHLRC1Q6VVB1 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC3.98□□□□□ -1.77
NHLRC1Q6VVB1 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.98□□□□□ -1.77
NHLRC1Q6VVB1 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC3.98□□□□□ -1.77
NHLRC1Q6VVB1 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.98□□□□□ -1.77
NHLRC1Q6VVB1 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
NHLRC1Q6VVB1 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
NHLRC1Q6VVB1 PPBPP1-201ENST00000510807 373 ntBASIC3.98□□□□□ -1.77
NHLRC1Q6VVB1 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC3.98□□□□□ -1.77
NHLRC1Q6VVB1 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC3.98□□□□□ -1.77
NHLRC1Q6VVB1 RNU6-1028P-201ENST00000517164 93 ntBASIC3.98□□□□□ -1.77
NHLRC1Q6VVB1 RNU4-60P-201ENST00000517239 135 ntBASIC3.98□□□□□ -1.77
NHLRC1Q6VVB1 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC3.98□□□□□ -1.77
NHLRC1Q6VVB1 OR8G5-201ENST00000524943 1041 ntBASIC3.98□□□□□ -1.77
NHLRC1Q6VVB1 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
NHLRC1Q6VVB1 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.98□□□□□ -1.77
NHLRC1Q6VVB1 AC068831.4-201ENST00000556118 109 ntBASIC3.98□□□□□ -1.77
NHLRC1Q6VVB1 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC3.98□□□□□ -1.77
NHLRC1Q6VVB1 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
NHLRC1Q6VVB1 AL139395.1-201ENST00000603662 160 ntBASIC3.98□□□□□ -1.77
NHLRC1Q6VVB1 AC121761.2-201ENST00000617300 689 ntBASIC3.98□□□□□ -1.77
NHLRC1Q6VVB1 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.98□□□□□ -1.77
NHLRC1Q6VVB1 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
NHLRC1Q6VVB1 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.98□□□□□ -1.77
NHLRC1Q6VVB1 AC006065.5-201ENST00000623427 349 ntBASIC3.98□□□□□ -1.77
NHLRC1Q6VVB1 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
NHLRC1Q6VVB1 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
NHLRC1Q6VVB1 AL592148.3-201ENST00000608771 2646 ntBASIC3.98□□□□□ -1.77
NHLRC1Q6VVB1 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
NHLRC1Q6VVB1 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.97□□□□□ -1.77
NHLRC1Q6VVB1 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC3.97□□□□□ -1.77
NHLRC1Q6VVB1 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.97□□□□□ -1.77
NHLRC1Q6VVB1 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
NHLRC1Q6VVB1 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC3.97□□□□□ -1.77
NHLRC1Q6VVB1 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC3.97□□□□□ -1.77
NHLRC1Q6VVB1 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC3.97□□□□□ -1.77
NHLRC1Q6VVB1 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
NHLRC1Q6VVB1 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.97□□□□□ -1.77
NHLRC1Q6VVB1 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
NHLRC1Q6VVB1 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
NHLRC1Q6VVB1 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
NHLRC1Q6VVB1 OR10J6P-201ENST00000289731 930 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms