Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC4.88□□□□□ -1.63
RNF220Q5VTB9 TMEM251P1-201ENST00000503717 318 ntBASIC4.88□□□□□ -1.63
RNF220Q5VTB9 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.88□□□□□ -1.63
RNF220Q5VTB9 PGBD4P4-201ENST00000509673 613 ntBASIC4.88□□□□□ -1.63
RNF220Q5VTB9 HSPA8P13-201ENST00000523715 472 ntBASIC4.88□□□□□ -1.63
RNF220Q5VTB9 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC4.88□□□□□ -1.63
RNF220Q5VTB9 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RNF220Q5VTB9 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.88□□□□□ -1.63
RNF220Q5VTB9 AL121766.1-201ENST00000547436 487 ntBASIC4.88□□□□□ -1.63
RNF220Q5VTB9 AC137768.1-201ENST00000549998 553 ntBASIC4.88□□□□□ -1.63
RNF220Q5VTB9 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC4.88□□□□□ -1.63
RNF220Q5VTB9 NMNAT1P1-201ENST00000554095 876 ntBASIC4.88□□□□□ -1.63
RNF220Q5VTB9 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC4.88□□□□□ -1.63
RNF220Q5VTB9 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
RNF220Q5VTB9 MIR5186-201ENST00000577504 120 ntBASIC4.88□□□□□ -1.63
RNF220Q5VTB9 AC011260.1-201ENST00000578420 472 ntBASIC4.88□□□□□ -1.63
RNF220Q5VTB9 MAGOH2P-202ENST00000584384 429 ntBASIC4.88□□□□□ -1.63
RNF220Q5VTB9 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.88□□□□□ -1.63
RNF220Q5VTB9 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.88□□□□□ -1.63
RNF220Q5VTB9 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.88□□□□□ -1.63
RNF220Q5VTB9 YWHAQP7-201ENST00000603536 658 ntBASIC4.88□□□□□ -1.63
RNF220Q5VTB9 AC009597.2-201ENST00000604659 592 ntBASIC4.88□□□□□ -1.63
RNF220Q5VTB9 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
RNF220Q5VTB9 HOTTIP_3.1-201ENST00000619957 337 ntBASIC4.88□□□□□ -1.63
RNF220Q5VTB9 RBM12B-AS1-201ENST00000623283 653 ntBASIC4.88□□□□□ -1.63
RNF220Q5VTB9 AC091965.5-201ENST00000624785 342 ntBASIC4.88□□□□□ -1.63
RNF220Q5VTB9 AP000843.1-201ENST00000624880 701 ntBASIC4.88□□□□□ -1.63
RNF220Q5VTB9 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RNF220Q5VTB9 GDI2P1-201ENST00000429312 1336 ntBASIC4.88□□□□□ -1.63
RNF220Q5VTB9 MUC2-202ENST00000613187 4845 ntBASIC4.88□□□□□ -1.63
RNF220Q5VTB9 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.88□□□□□ -1.63
RNF220Q5VTB9 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
RNF220Q5VTB9 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RNF220Q5VTB9 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.88□□□□□ -1.63
RNF220Q5VTB9 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.88□□□□□ -1.63
RNF220Q5VTB9 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.87□□□□□ -1.63
RNF220Q5VTB9 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RNF220Q5VTB9 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
RNF220Q5VTB9 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.87□□□□□ -1.63
RNF220Q5VTB9 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
RNF220Q5VTB9 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
RNF220Q5VTB9 RNU6-374P-201ENST00000364146 108 ntBASIC4.87□□□□□ -1.63
RNF220Q5VTB9 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC4.87□□□□□ -1.63
RNF220Q5VTB9 RNU6-723P-201ENST00000383973 107 ntBASIC4.87□□□□□ -1.63
RNF220Q5VTB9 HSPA8P15-201ENST00000401676 786 ntBASIC4.87□□□□□ -1.63
RNF220Q5VTB9 AL121972.1-201ENST00000402023 252 ntBASIC4.87□□□□□ -1.63
RNF220Q5VTB9 RN7SKP293-201ENST00000411389 296 ntBASIC4.87□□□□□ -1.63
RNF220Q5VTB9 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.87□□□□□ -1.63
RNF220Q5VTB9 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC4.87□□□□□ -1.63
RNF220Q5VTB9 RPS29P14-201ENST00000431518 171 ntBASIC4.87□□□□□ -1.63
RNF220Q5VTB9 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC4.87□□□□□ -1.63
RNF220Q5VTB9 GAPDHP58-201ENST00000438477 1006 ntBASIC4.87□□□□□ -1.63
RNF220Q5VTB9 AL450263.2-201ENST00000439400 589 ntBASIC4.87□□□□□ -1.63
RNF220Q5VTB9 RPS11P7-201ENST00000442125 465 ntBASIC4.87□□□□□ -1.63
RNF220Q5VTB9 AC073648.4-201ENST00000442655 781 ntBASIC4.87□□□□□ -1.63
RNF220Q5VTB9 AL161636.2-201ENST00000445179 927 ntBASIC4.87□□□□□ -1.63
RNF220Q5VTB9 EEF1E1P1-201ENST00000446998 430 ntBASIC4.87□□□□□ -1.63
RNF220Q5VTB9 ARPC3P5-201ENST00000448802 534 ntBASIC4.87□□□□□ -1.63
RNF220Q5VTB9 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC4.87□□□□□ -1.63
RNF220Q5VTB9 OR52J1P-201ENST00000450596 932 ntBASIC4.87□□□□□ -1.63
RNF220Q5VTB9 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.87□□□□□ -1.63
RNF220Q5VTB9 AC005008.1-201ENST00000456151 612 ntBASIC4.87□□□□□ -1.63
RNF220Q5VTB9 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.87□□□□□ -1.63
RNF220Q5VTB9 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC4.87□□□□□ -1.63
RNF220Q5VTB9 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RNF220Q5VTB9 AC100832.1-201ENST00000471945 383 ntBASIC4.87□□□□□ -1.63
RNF220Q5VTB9 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RNF220Q5VTB9 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.87□□□□□ -1.63
RNF220Q5VTB9 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.87□□□□□ -1.63
RNF220Q5VTB9 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.87□□□□□ -1.63
RNF220Q5VTB9 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.87□□□□□ -1.63
RNF220Q5VTB9 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RNF220Q5VTB9 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC4.87□□□□□ -1.63
RNF220Q5VTB9 AC106038.2-201ENST00000520706 568 ntBASIC4.87□□□□□ -1.63
RNF220Q5VTB9 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC4.87□□□□□ -1.63
RNF220Q5VTB9 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.87□□□□□ -1.63
RNF220Q5VTB9 HNRNPCP4-201ENST00000571636 900 ntBASIC4.87□□□□□ -1.63
RNF220Q5VTB9 AC136618.2-201ENST00000575091 400 ntBASIC4.87□□□□□ -1.63
RNF220Q5VTB9 ANKRD36BP2-206ENST00000575193 1245 ntBASIC4.87□□□□□ -1.63
RNF220Q5VTB9 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.87□□□□□ -1.63
RNF220Q5VTB9 AP005136.1-201ENST00000579765 429 ntBASIC4.87□□□□□ -1.63
RNF220Q5VTB9 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.87□□□□□ -1.63
RNF220Q5VTB9 RN7SL708P-201ENST00000580952 299 ntBASIC4.87□□□□□ -1.63
RNF220Q5VTB9 MTCYBP22-201ENST00000603788 447 ntBASIC4.87□□□□□ -1.63
RNF220Q5VTB9 AL162431.4-201ENST00000604674 411 ntBASIC4.87□□□□□ -1.63
RNF220Q5VTB9 AL009028.1-201ENST00000604895 802 ntBASIC4.87□□□□□ -1.63
RNF220Q5VTB9 AC104695.2-201ENST00000605056 775 ntBASIC4.87□□□□□ -1.63
RNF220Q5VTB9 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.87□□□□□ -1.63
RNF220Q5VTB9 AC080013.4-201ENST00000607624 649 ntBASIC4.87□□□□□ -1.63
RNF220Q5VTB9 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.87□□□□□ -1.63
RNF220Q5VTB9 MIR8080-201ENST00000622224 89 ntBASIC4.87□□□□□ -1.63
RNF220Q5VTB9 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC4.87□□□□□ -1.63
RNF220Q5VTB9 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.87□□□□□ -1.63
RNF220Q5VTB9 CYP3A51P-201ENST00000633513 256 ntBASIC4.87□□□□□ -1.63
RNF220Q5VTB9 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.87□□□□□ -1.63
RNF220Q5VTB9 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RNF220Q5VTB9 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RNF220Q5VTB9 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.87□□□□□ -1.63
RNF220Q5VTB9 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RNF220Q5VTB9 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 138.8 ms