Protein–RNA interactions for Protein: Q01094

E2F1, Transcription factor E2F1, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F1Q01094 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.81□□□□□ -1.64
E2F1Q01094 TMSB4XP6-201ENST00000415187 135 ntBASIC4.81□□□□□ -1.64
E2F1Q01094 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.81□□□□□ -1.64
E2F1Q01094 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.81□□□□□ -1.64
E2F1Q01094 TMSB4XP1-201ENST00000424567 135 ntBASIC4.81□□□□□ -1.64
E2F1Q01094 RPL18P10-201ENST00000425606 538 ntBASIC4.81□□□□□ -1.64
E2F1Q01094 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.81□□□□□ -1.64
E2F1Q01094 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.81□□□□□ -1.64
E2F1Q01094 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.81□□□□□ -1.64
E2F1Q01094 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.81□□□□□ -1.64
E2F1Q01094 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.81□□□□□ -1.64
E2F1Q01094 AURKAPS2-201ENST00000454983 333 ntBASIC4.81□□□□□ -1.64
E2F1Q01094 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.81□□□□□ -1.64
E2F1Q01094 ARL4AP1-201ENST00000503220 705 ntBASIC4.81□□□□□ -1.64
E2F1Q01094 DSTNP2-201ENST00000504533 515 ntBASIC4.81□□□□□ -1.64
E2F1Q01094 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC4.81□□□□□ -1.64
E2F1Q01094 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC4.81□□□□□ -1.64
E2F1Q01094 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.81□□□□□ -1.64
E2F1Q01094 IGKV2-36-201ENST00000519999 223 ntBASIC4.81□□□□□ -1.64
E2F1Q01094 COX6B1P6-201ENST00000522347 255 ntBASIC4.81□□□□□ -1.64
E2F1Q01094 HIGD1AP10-201ENST00000527837 282 ntBASIC4.81□□□□□ -1.64
E2F1Q01094 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.81□□□□□ -1.64
E2F1Q01094 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.81□□□□□ -1.64
E2F1Q01094 AC004217.3-201ENST00000551552 878 ntBASIC4.81□□□□□ -1.64
E2F1Q01094 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.81□□□□□ -1.64
E2F1Q01094 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC4.81□□□□□ -1.64
E2F1Q01094 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.81□□□□□ -1.64
E2F1Q01094 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC4.81□□□□□ -1.64
E2F1Q01094 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.81□□□□□ -1.64
E2F1Q01094 AC127024.5-201ENST00000580085 462 ntBASIC4.81□□□□□ -1.64
E2F1Q01094 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.81□□□□□ -1.64
E2F1Q01094 RSL24D1P11-201ENST00000591045 491 ntBASIC4.81□□□□□ -1.64
E2F1Q01094 AC112220.3-201ENST00000605502 502 ntBASIC4.81□□□□□ -1.64
E2F1Q01094 AP005432.2-201ENST00000608162 586 ntBASIC4.81□□□□□ -1.64
E2F1Q01094 AC103591.3-201ENST00000608684 209 ntBASIC4.81□□□□□ -1.64
E2F1Q01094 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC4.81□□□□□ -1.64
E2F1Q01094 AC083809.1-201ENST00000615051 472 ntBASIC4.81□□□□□ -1.64
E2F1Q01094 AC006338.2-201ENST00000616864 791 ntBASIC4.81□□□□□ -1.64
E2F1Q01094 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
E2F1Q01094 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
E2F1Q01094 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
E2F1Q01094 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
E2F1Q01094 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
E2F1Q01094 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
E2F1Q01094 AC011447.7-201ENST00000624228 1590 ntBASIC4.81□□□□□ -1.64
E2F1Q01094 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
E2F1Q01094 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.81□□□□□ -1.64
E2F1Q01094 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.81□□□□□ -1.64
E2F1Q01094 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
E2F1Q01094 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.81□□□□□ -1.64
E2F1Q01094 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.81□□□□□ -1.64
E2F1Q01094 AC092104.1-201ENST00000497346 1441 ntBASIC4.8□□□□□ -1.64
E2F1Q01094 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.8□□□□□ -1.64
E2F1Q01094 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.8□□□□□ -1.64
E2F1Q01094 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
E2F1Q01094 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
E2F1Q01094 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
E2F1Q01094 TRIM51GP-201ENST00000534741 1350 ntBASIC4.8□□□□□ -1.64
E2F1Q01094 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
E2F1Q01094 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
E2F1Q01094 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.8□□□□□ -1.64
E2F1Q01094 PCAT14-202ENST00000627127 3935 ntBASIC4.8□□□□□ -1.64
E2F1Q01094 SMG1P7-201ENST00000565246 2704 ntBASIC4.8□□□□□ -1.64
E2F1Q01094 OR4K15-201ENST00000305051 1216 ntBASIC4.8□□□□□ -1.64
E2F1Q01094 RNU6-500P-201ENST00000362349 107 ntBASIC4.8□□□□□ -1.64
E2F1Q01094 RNA5SP191-201ENST00000362585 102 ntBASIC4.8□□□□□ -1.64
E2F1Q01094 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.8□□□□□ -1.64
E2F1Q01094 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
E2F1Q01094 RNU6-192P-201ENST00000391253 100 ntBASIC4.8□□□□□ -1.64
E2F1Q01094 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
E2F1Q01094 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.8□□□□□ -1.64
E2F1Q01094 AL450992.3-201ENST00000413192 568 ntBASIC4.8□□□□□ -1.64
E2F1Q01094 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.8□□□□□ -1.64
E2F1Q01094 MTCO3P30-201ENST00000426425 670 ntBASIC4.8□□□□□ -1.64
E2F1Q01094 IFNNP1-201ENST00000429219 553 ntBASIC4.8□□□□□ -1.64
E2F1Q01094 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.8□□□□□ -1.64
E2F1Q01094 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC4.8□□□□□ -1.64
E2F1Q01094 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC4.8□□□□□ -1.64
E2F1Q01094 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.8□□□□□ -1.64
E2F1Q01094 AC009963.2-201ENST00000453431 138 ntBASIC4.8□□□□□ -1.64
E2F1Q01094 DDX39BP2-208ENST00000453923 258 ntBASIC4.8□□□□□ -1.64
E2F1Q01094 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.8□□□□□ -1.64
E2F1Q01094 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.8□□□□□ -1.64
E2F1Q01094 AC021660.1-201ENST00000465006 554 ntBASIC4.8□□□□□ -1.64
E2F1Q01094 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.8□□□□□ -1.64
E2F1Q01094 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC4.8□□□□□ -1.64
E2F1Q01094 AK3P4-201ENST00000504283 583 ntBASIC4.8□□□□□ -1.64
E2F1Q01094 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
E2F1Q01094 AC010424.1-201ENST00000506336 297 ntBASIC4.8□□□□□ -1.64
E2F1Q01094 MTATP6P22-201ENST00000507369 598 ntBASIC4.8□□□□□ -1.64
E2F1Q01094 AC109471.1-201ENST00000511631 612 ntBASIC4.8□□□□□ -1.64
E2F1Q01094 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.8□□□□□ -1.64
E2F1Q01094 AC008562.1-201ENST00000521763 330 ntBASIC4.8□□□□□ -1.64
E2F1Q01094 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
E2F1Q01094 AC009643.1-201ENST00000532030 391 ntBASIC4.8□□□□□ -1.64
E2F1Q01094 AP001880.2-201ENST00000538233 448 ntBASIC4.8□□□□□ -1.64
E2F1Q01094 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC4.8□□□□□ -1.64
E2F1Q01094 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC4.8□□□□□ -1.64
E2F1Q01094 AC068790.6-201ENST00000602558 258 ntBASIC4.8□□□□□ -1.64
E2F1Q01094 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms