Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 OR14L1P-202ENST00000641545 3009 ntBASIC3.84□□□□□ -1.79
CX3CL1P78423 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.84□□□□□ -1.79
CX3CL1P78423 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC3.84□□□□□ -1.79
CX3CL1P78423 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CX3CL1P78423 Y_RNA.25-201ENST00000362528 102 ntBASIC3.84□□□□□ -1.79
CX3CL1P78423 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
CX3CL1P78423 SNORA51.8-201ENST00000384234 132 ntBASIC3.84□□□□□ -1.79
CX3CL1P78423 MIR649-201ENST00000384843 97 ntBASIC3.84□□□□□ -1.79
CX3CL1P78423 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
CX3CL1P78423 RPS24P12-201ENST00000402084 394 ntBASIC3.84□□□□□ -1.79
CX3CL1P78423 RNU6-757P-201ENST00000410334 100 ntBASIC3.84□□□□□ -1.79
CX3CL1P78423 CEACAMP8-201ENST00000413902 580 ntBASIC3.84□□□□□ -1.79
CX3CL1P78423 AC006960.1-201ENST00000419980 153 ntBASIC3.84□□□□□ -1.79
CX3CL1P78423 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.84□□□□□ -1.79
CX3CL1P78423 AC004448.2-201ENST00000422360 586 ntBASIC3.84□□□□□ -1.79
CX3CL1P78423 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.84□□□□□ -1.79
CX3CL1P78423 AC096632.1-201ENST00000427395 310 ntBASIC3.84□□□□□ -1.79
CX3CL1P78423 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.84□□□□□ -1.79
CX3CL1P78423 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC3.84□□□□□ -1.79
CX3CL1P78423 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC3.84□□□□□ -1.79
CX3CL1P78423 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.84□□□□□ -1.79
CX3CL1P78423 PSMD10P3-201ENST00000437000 448 ntBASIC3.84□□□□□ -1.79
CX3CL1P78423 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.84□□□□□ -1.79
CX3CL1P78423 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC3.84□□□□□ -1.79
CX3CL1P78423 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.84□□□□□ -1.79
CX3CL1P78423 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.84□□□□□ -1.79
CX3CL1P78423 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC3.84□□□□□ -1.79
CX3CL1P78423 Z77249.1-201ENST00000444622 1175 ntBASIC3.84□□□□□ -1.79
CX3CL1P78423 RPL7P31-201ENST00000450192 724 ntBASIC3.84□□□□□ -1.79
CX3CL1P78423 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC3.84□□□□□ -1.79
CX3CL1P78423 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC3.84□□□□□ -1.79
CX3CL1P78423 RPL37P6-202ENST00000464216 403 ntBASIC3.84□□□□□ -1.79
CX3CL1P78423 GAPDHP36-201ENST00000480688 918 ntBASIC3.84□□□□□ -1.79
CX3CL1P78423 AC013828.1-201ENST00000481845 158 ntBASIC3.84□□□□□ -1.79
CX3CL1P78423 ATP6V1G1P6-201ENST00000504007 334 ntBASIC3.84□□□□□ -1.79
CX3CL1P78423 AC113430.1-201ENST00000506872 718 ntBASIC3.84□□□□□ -1.79
CX3CL1P78423 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC3.84□□□□□ -1.79
CX3CL1P78423 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC3.84□□□□□ -1.79
CX3CL1P78423 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.84□□□□□ -1.79
CX3CL1P78423 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.84□□□□□ -1.79
CX3CL1P78423 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
CX3CL1P78423 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.84□□□□□ -1.79
CX3CL1P78423 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC3.84□□□□□ -1.79
CX3CL1P78423 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.84□□□□□ -1.79
CX3CL1P78423 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
CX3CL1P78423 HIGD1AP17-201ENST00000554576 276 ntBASIC3.84□□□□□ -1.79
CX3CL1P78423 EDDM3DP-201ENST00000554692 434 ntBASIC3.84□□□□□ -1.79
CX3CL1P78423 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC3.84□□□□□ -1.79
CX3CL1P78423 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.84□□□□□ -1.79
CX3CL1P78423 SULT1C2P1-202ENST00000562418 459 ntBASIC3.84□□□□□ -1.79
CX3CL1P78423 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC3.84□□□□□ -1.79
CX3CL1P78423 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.84□□□□□ -1.79
CX3CL1P78423 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.84□□□□□ -1.79
CX3CL1P78423 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC3.84□□□□□ -1.79
CX3CL1P78423 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC3.84□□□□□ -1.79
CX3CL1P78423 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC3.84□□□□□ -1.79
CX3CL1P78423 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC3.84□□□□□ -1.79
CX3CL1P78423 AL353778.1-201ENST00000603149 408 ntBASIC3.84□□□□□ -1.79
CX3CL1P78423 AC009220.3-201ENST00000604318 586 ntBASIC3.84□□□□□ -1.79
CX3CL1P78423 IGKV2OR2-2-201ENST00000605025 300 ntBASIC3.84□□□□□ -1.79
CX3CL1P78423 AC133644.2-201ENST00000608142 540 ntBASIC3.84□□□□□ -1.79
CX3CL1P78423 AC007497.1-201ENST00000610421 561 ntBASIC3.84□□□□□ -1.79
CX3CL1P78423 AC090510.2-201ENST00000617465 629 ntBASIC3.84□□□□□ -1.79
CX3CL1P78423 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC3.84□□□□□ -1.79
CX3CL1P78423 AC140113.4-201ENST00000622087 222 ntBASIC3.84□□□□□ -1.79
CX3CL1P78423 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC3.84□□□□□ -1.79
CX3CL1P78423 CASC19-222ENST00000641321 1173 ntBASIC3.84□□□□□ -1.79
CX3CL1P78423 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CX3CL1P78423 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
CX3CL1P78423 CDR1-202ENST00000625883 1485 ntBASIC3.84□□□□□ -1.8
CX3CL1P78423 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.84□□□□□ -1.8
CX3CL1P78423 SAMMSON-226ENST00000642089 1582 ntBASIC3.84□□□□□ -1.8
CX3CL1P78423 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
CX3CL1P78423 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
CX3CL1P78423 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
CX3CL1P78423 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
CX3CL1P78423 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CX3CL1P78423 DDX18P3-201ENST00000404856 2007 ntBASIC3.83□□□□□ -1.8
CX3CL1P78423 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CX3CL1P78423 IRF5P1-201ENST00000504852 2164 ntBASIC3.83□□□□□ -1.8
CX3CL1P78423 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC3.83□□□□□ -1.8
CX3CL1P78423 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CX3CL1P78423 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC3.83□□□□□ -1.8
CX3CL1P78423 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CX3CL1P78423 RNA5SP372-201ENST00000390836 115 ntBASIC3.83□□□□□ -1.8
CX3CL1P78423 ATP5F1P2-201ENST00000398143 760 ntBASIC3.83□□□□□ -1.8
CX3CL1P78423 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CX3CL1P78423 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC3.83□□□□□ -1.8
CX3CL1P78423 RSL24D1P4-201ENST00000400938 484 ntBASIC3.83□□□□□ -1.8
CX3CL1P78423 TANK-203ENST00000402568 878 ntTSL 5 BASIC3.83□□□□□ -1.8
CX3CL1P78423 AL450338.1-201ENST00000407987 512 ntBASIC3.83□□□□□ -1.8
CX3CL1P78423 AC069218.2-201ENST00000411665 344 ntBASIC3.83□□□□□ -1.8
CX3CL1P78423 AC114755.2-201ENST00000413520 361 ntBASIC3.83□□□□□ -1.8
CX3CL1P78423 AC107081.1-201ENST00000414975 361 ntBASIC3.83□□□□□ -1.8
CX3CL1P78423 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC3.83□□□□□ -1.8
CX3CL1P78423 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC3.83□□□□□ -1.8
CX3CL1P78423 RGS17P1-201ENST00000423358 553 ntBASIC3.83□□□□□ -1.8
CX3CL1P78423 EIF4HP2-201ENST00000424380 563 ntBASIC3.83□□□□□ -1.8
CX3CL1P78423 SDCBPP2-201ENST00000424643 885 ntBASIC3.83□□□□□ -1.8
CX3CL1P78423 ARL6IP1P2-201ENST00000431356 563 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms