Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.43□□□□□ -1.7
CCNA1P78396 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.43□□□□□ -1.7
CCNA1P78396 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CCNA1P78396 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
CCNA1P78396 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCNA1P78396 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.43□□□□□ -1.7
CCNA1P78396 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCNA1P78396 DCAF13P3-201ENST00000561147 1334 ntBASIC4.43□□□□□ -1.7
CCNA1P78396 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCNA1P78396 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
CCNA1P78396 AC073346.2-201ENST00000624724 2058 ntBASIC4.42□□□□□ -1.7
CCNA1P78396 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
CCNA1P78396 MTCO1P12-201ENST00000414273 1543 ntBASIC4.42□□□□□ -1.7
CCNA1P78396 XIAPP3-201ENST00000312918 795 ntBASIC4.42□□□□□ -1.7
CCNA1P78396 SNORA62.2-201ENST00000364672 152 ntBASIC4.42□□□□□ -1.7
CCNA1P78396 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.42□□□□□ -1.7
CCNA1P78396 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC4.42□□□□□ -1.7
CCNA1P78396 SNORD3H-201ENST00000384486 214 ntBASIC4.42□□□□□ -1.7
CCNA1P78396 MIR183-201ENST00000384958 110 ntBASIC4.42□□□□□ -1.7
CCNA1P78396 MIR199A2-201ENST00000385289 110 ntBASIC4.42□□□□□ -1.7
CCNA1P78396 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CCNA1P78396 AC105402.1-201ENST00000413336 545 ntBASIC4.42□□□□□ -1.7
CCNA1P78396 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC4.42□□□□□ -1.7
CCNA1P78396 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.42□□□□□ -1.7
CCNA1P78396 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.42□□□□□ -1.7
CCNA1P78396 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.42□□□□□ -1.7
CCNA1P78396 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.42□□□□□ -1.7
CCNA1P78396 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
CCNA1P78396 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.42□□□□□ -1.7
CCNA1P78396 HMGB1P37-201ENST00000439613 609 ntBASIC4.42□□□□□ -1.7
CCNA1P78396 MTCO1P14-201ENST00000441695 1559 ntBASIC4.42□□□□□ -1.7
CCNA1P78396 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.42□□□□□ -1.7
CCNA1P78396 FGF7P3-201ENST00000454645 303 ntBASIC4.42□□□□□ -1.7
CCNA1P78396 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.42□□□□□ -1.7
CCNA1P78396 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.42□□□□□ -1.7
CCNA1P78396 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.42□□□□□ -1.7
CCNA1P78396 AP000926.1-201ENST00000479573 241 ntBASIC4.42□□□□□ -1.7
CCNA1P78396 HMGB1P21-201ENST00000502313 581 ntBASIC4.42□□□□□ -1.7
CCNA1P78396 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.42□□□□□ -1.7
CCNA1P78396 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.42□□□□□ -1.7
CCNA1P78396 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.42□□□□□ -1.7
CCNA1P78396 VWA8P1-201ENST00000510889 176 ntBASIC4.42□□□□□ -1.7
CCNA1P78396 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.42□□□□□ -1.7
CCNA1P78396 AC010285.3-201ENST00000511668 676 ntBASIC4.42□□□□□ -1.7
CCNA1P78396 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.42□□□□□ -1.7
CCNA1P78396 HMGN1P15-201ENST00000513870 295 ntBASIC4.42□□□□□ -1.7
CCNA1P78396 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.42□□□□□ -1.7
CCNA1P78396 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.42□□□□□ -1.7
CCNA1P78396 AC067852.4-201ENST00000590314 478 ntBASIC4.42□□□□□ -1.7
CCNA1P78396 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.42□□□□□ -1.7
CCNA1P78396 AC010680.4-201ENST00000605334 543 ntBASIC4.42□□□□□ -1.7
CCNA1P78396 AC091953.5-201ENST00000622919 233 ntBASIC4.42□□□□□ -1.7
CCNA1P78396 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
CCNA1P78396 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCNA1P78396 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.42□□□□□ -1.7
CCNA1P78396 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.41□□□□□ -1.7
CCNA1P78396 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
CCNA1P78396 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.41□□□□□ -1.7
CCNA1P78396 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CCNA1P78396 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CCNA1P78396 RNU6-819P-201ENST00000364116 107 ntBASIC4.41□□□□□ -1.7
CCNA1P78396 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CCNA1P78396 RNU4-31P-201ENST00000384211 141 ntBASIC4.41□□□□□ -1.7
CCNA1P78396 RNU6-31P-201ENST00000384388 108 ntBASIC4.41□□□□□ -1.7
CCNA1P78396 MIR491-201ENST00000384877 84 ntBASIC4.41□□□□□ -1.7
CCNA1P78396 PTMAP5-201ENST00000393073 333 ntBASIC4.41□□□□□ -1.7
CCNA1P78396 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.41□□□□□ -1.7
CCNA1P78396 CYCSP43-201ENST00000438233 310 ntBASIC4.41□□□□□ -1.7
CCNA1P78396 AC104978.1-201ENST00000449387 391 ntBASIC4.41□□□□□ -1.7
CCNA1P78396 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.41□□□□□ -1.7
CCNA1P78396 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.41□□□□□ -1.7
CCNA1P78396 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.41□□□□□ -1.7
CCNA1P78396 RN7SL585P-201ENST00000470538 280 ntBASIC4.41□□□□□ -1.7
CCNA1P78396 RPS26P28-201ENST00000470806 348 ntBASIC4.41□□□□□ -1.7
CCNA1P78396 CAB39P1-201ENST00000502277 460 ntBASIC4.41□□□□□ -1.7
CCNA1P78396 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.41□□□□□ -1.7
CCNA1P78396 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.41□□□□□ -1.7
CCNA1P78396 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CCNA1P78396 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC4.41□□□□□ -1.7
CCNA1P78396 SNORA70.17-201ENST00000516449 133 ntBASIC4.41□□□□□ -1.7
CCNA1P78396 SNORA70.24-201ENST00000517233 118 ntBASIC4.41□□□□□ -1.7
CCNA1P78396 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.41□□□□□ -1.7
CCNA1P78396 AC022695.1-201ENST00000522089 237 ntBASIC4.41□□□□□ -1.7
CCNA1P78396 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.41□□□□□ -1.7
CCNA1P78396 AC090525.3-201ENST00000605601 189 ntBASIC4.41□□□□□ -1.7
CCNA1P78396 AL391597.1-201ENST00000618707 694 ntBASIC4.41□□□□□ -1.7
CCNA1P78396 AC004943.3-201ENST00000624116 600 ntBASIC4.41□□□□□ -1.7
CCNA1P78396 AC015726.3-201ENST00000624501 418 ntBASIC4.41□□□□□ -1.7
CCNA1P78396 U6.105-201ENST00000637379 88 ntBASIC4.41□□□□□ -1.7
CCNA1P78396 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.41□□□□□ -1.7
CCNA1P78396 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.41□□□□□ -1.7
CCNA1P78396 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CCNA1P78396 AC068254.2-201ENST00000623938 3577 ntBASIC4.41□□□□□ -1.7
CCNA1P78396 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CCNA1P78396 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCNA1P78396 MTND5P1-201ENST00000445440 1375 ntBASIC4.4□□□□□ -1.7
CCNA1P78396 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CCNA1P78396 RNU6-317P-201ENST00000384031 107 ntBASIC4.4□□□□□ -1.71
CCNA1P78396 MIR218-2-201ENST00000385006 110 ntBASIC4.4□□□□□ -1.71
CCNA1P78396 RNU6-244P-201ENST00000391028 104 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms