Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.83□□□□□ -1.8
RPS4XP62701 AC093801.2-201ENST00000503966 1050 ntBASIC3.83□□□□□ -1.8
RPS4XP62701 AC017037.1-201ENST00000508460 471 ntBASIC3.83□□□□□ -1.8
RPS4XP62701 C1GALT1P2-201ENST00000510813 1104 ntBASIC3.83□□□□□ -1.8
RPS4XP62701 OR5H4P-201ENST00000510851 923 ntBASIC3.83□□□□□ -1.8
RPS4XP62701 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.83□□□□□ -1.8
RPS4XP62701 RNA5SP73-201ENST00000516744 108 ntBASIC3.83□□□□□ -1.8
RPS4XP62701 RN7SKP82-201ENST00000516786 223 ntBASIC3.83□□□□□ -1.8
RPS4XP62701 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.83□□□□□ -1.8
RPS4XP62701 MTND5P21-201ENST00000531961 522 ntBASIC3.83□□□□□ -1.8
RPS4XP62701 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.83□□□□□ -1.8
RPS4XP62701 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC3.83□□□□□ -1.8
RPS4XP62701 AC084824.1-201ENST00000550917 1005 ntBASIC3.83□□□□□ -1.8
RPS4XP62701 AL161713.1-201ENST00000555538 145 ntBASIC3.83□□□□□ -1.8
RPS4XP62701 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.83□□□□□ -1.8
RPS4XP62701 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC3.83□□□□□ -1.8
RPS4XP62701 MIR1254-2-201ENST00000579553 63 ntBASIC3.83□□□□□ -1.8
RPS4XP62701 AP000919.1-202ENST00000581139 1264 ntBASIC3.83□□□□□ -1.8
RPS4XP62701 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.83□□□□□ -1.8
RPS4XP62701 AC067852.4-201ENST00000590314 478 ntBASIC3.83□□□□□ -1.8
RPS4XP62701 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.83□□□□□ -1.8
RPS4XP62701 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RPS4XP62701 AC068620.3-201ENST00000602749 560 ntBASIC3.83□□□□□ -1.8
RPS4XP62701 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RPS4XP62701 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC3.83□□□□□ -1.8
RPS4XP62701 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RPS4XP62701 AC007275.1-201ENST00000621243 671 ntBASIC3.83□□□□□ -1.8
RPS4XP62701 AL445363.3-201ENST00000623080 671 ntBASIC3.83□□□□□ -1.8
RPS4XP62701 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC3.83□□□□□ -1.8
RPS4XP62701 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RPS4XP62701 GHR-202ENST00000357703 4316 ntTSL 5 BASIC3.83□□□□□ -1.8
RPS4XP62701 GHR-213ENST00000622294 4312 ntTSL 5 BASIC3.83□□□□□ -1.8
RPS4XP62701 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.83□□□□□ -1.8
RPS4XP62701 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
RPS4XP62701 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RPS4XP62701 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
RPS4XP62701 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RPS4XP62701 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RPS4XP62701 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.82□□□□□ -1.8
RPS4XP62701 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.82□□□□□ -1.8
RPS4XP62701 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RPS4XP62701 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RPS4XP62701 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.82□□□□□ -1.8
RPS4XP62701 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
RPS4XP62701 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.82□□□□□ -1.8
RPS4XP62701 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RPS4XP62701 AC005261.4-201ENST00000600047 1385 ntBASIC3.82□□□□□ -1.8
RPS4XP62701 AC025263.3-201ENST00000622965 1396 ntBASIC3.82□□□□□ -1.8
RPS4XP62701 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RPS4XP62701 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RPS4XP62701 OR52B1P-201ENST00000316506 909 ntBASIC3.82□□□□□ -1.8
RPS4XP62701 RNA5SP366-201ENST00000365454 123 ntBASIC3.82□□□□□ -1.8
RPS4XP62701 AC234772.1-201ENST00000377927 937 ntBASIC3.82□□□□□ -1.8
RPS4XP62701 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
RPS4XP62701 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.82□□□□□ -1.8
RPS4XP62701 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC3.82□□□□□ -1.8
RPS4XP62701 SLC4A1APP1-201ENST00000419995 602 ntBASIC3.82□□□□□ -1.8
RPS4XP62701 RPL23AP38-201ENST00000423801 469 ntBASIC3.82□□□□□ -1.8
RPS4XP62701 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC3.82□□□□□ -1.8
RPS4XP62701 RPL21P110-201ENST00000433345 446 ntBASIC3.82□□□□□ -1.8
RPS4XP62701 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.82□□□□□ -1.8
RPS4XP62701 HMGB1P45-201ENST00000435986 653 ntBASIC3.82□□□□□ -1.8
RPS4XP62701 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.82□□□□□ -1.8
RPS4XP62701 RPL23AP89-201ENST00000439324 255 ntBASIC3.82□□□□□ -1.8
RPS4XP62701 SEPT14P24-201ENST00000447236 180 ntBASIC3.82□□□□□ -1.8
RPS4XP62701 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.82□□□□□ -1.8
RPS4XP62701 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RPS4XP62701 AC113430.1-201ENST00000506872 718 ntBASIC3.82□□□□□ -1.8
RPS4XP62701 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.82□□□□□ -1.8
RPS4XP62701 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RPS4XP62701 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.82□□□□□ -1.8
RPS4XP62701 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.82□□□□□ -1.8
RPS4XP62701 AC087894.1-201ENST00000538359 518 ntBASIC3.82□□□□□ -1.8
RPS4XP62701 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.82□□□□□ -1.8
RPS4XP62701 AC010735.1-201ENST00000567305 1026 ntBASIC3.82□□□□□ -1.8
RPS4XP62701 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.82□□□□□ -1.8
RPS4XP62701 AC067959.1-201ENST00000604334 379 ntBASIC3.82□□□□□ -1.8
RPS4XP62701 BNIP3P31-201ENST00000604515 566 ntBASIC3.82□□□□□ -1.8
RPS4XP62701 MIR6864-201ENST00000617935 70 ntBASIC3.82□□□□□ -1.8
RPS4XP62701 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
RPS4XP62701 AP006248.2-201ENST00000623309 592 ntBASIC3.82□□□□□ -1.8
RPS4XP62701 AC010872.1-201ENST00000624225 675 ntBASIC3.82□□□□□ -1.8
RPS4XP62701 MIR3653-201ENST00000625572 110 ntBASIC3.82□□□□□ -1.8
RPS4XP62701 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC3.82□□□□□ -1.8
RPS4XP62701 BMS1P21-201ENST00000634565 365 ntBASIC3.82□□□□□ -1.8
RPS4XP62701 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.82□□□□□ -1.8
RPS4XP62701 LDHAL6CP-202ENST00000550738 3224 ntBASIC3.82□□□□□ -1.8
RPS4XP62701 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RPS4XP62701 AC087190.4-201ENST00000574616 8334 ntBASIC3.82□□□□□ -1.8
RPS4XP62701 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
RPS4XP62701 XPOTP1-201ENST00000443317 2398 ntBASIC3.81□□□□□ -1.8
RPS4XP62701 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
RPS4XP62701 MIR383-201ENST00000362257 73 ntBASIC3.81□□□□□ -1.8
RPS4XP62701 RNU5B-4P-201ENST00000363508 111 ntBASIC3.81□□□□□ -1.8
RPS4XP62701 RNA5SP515-201ENST00000364570 118 ntBASIC3.81□□□□□ -1.8
RPS4XP62701 RNU1-64P-201ENST00000365443 163 ntBASIC3.81□□□□□ -1.8
RPS4XP62701 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RPS4XP62701 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RPS4XP62701 MIR513A2-201ENST00000385249 127 ntBASIC3.81□□□□□ -1.8
RPS4XP62701 PRRC2CP1-201ENST00000404428 159 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms