Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AC109309.2-201ENST00000612597 332 ntBASIC4.38□□□□□ -1.71
SOX2P48431 RPSAP73-201ENST00000614820 330 ntBASIC4.38□□□□□ -1.71
SOX2P48431 MIR8069-1-201ENST00000616627 86 ntBASIC4.38□□□□□ -1.71
SOX2P48431 MIR8069-2-201ENST00000621412 86 ntBASIC4.38□□□□□ -1.71
SOX2P48431 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC4.38□□□□□ -1.71
SOX2P48431 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC4.38□□□□□ -1.71
SOX2P48431 MTCO1P14-201ENST00000441695 1559 ntBASIC4.38□□□□□ -1.71
SOX2P48431 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SOX2P48431 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SOX2P48431 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
SOX2P48431 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.37□□□□□ -1.71
SOX2P48431 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SOX2P48431 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SOX2P48431 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.37□□□□□ -1.71
SOX2P48431 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
SOX2P48431 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SOX2P48431 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.37□□□□□ -1.71
SOX2P48431 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC4.37□□□□□ -1.71
SOX2P48431 AL121657.1-201ENST00000327215 531 ntBASIC4.37□□□□□ -1.71
SOX2P48431 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
SOX2P48431 FABP12P1-201ENST00000401911 322 ntBASIC4.37□□□□□ -1.71
SOX2P48431 MIR1182-201ENST00000408363 97 ntBASIC4.37□□□□□ -1.71
SOX2P48431 Y_RNA.619-201ENST00000410951 90 ntBASIC4.37□□□□□ -1.71
SOX2P48431 AC073264.1-201ENST00000411508 416 ntBASIC4.37□□□□□ -1.71
SOX2P48431 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.37□□□□□ -1.71
SOX2P48431 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC4.37□□□□□ -1.71
SOX2P48431 CYCSP46-201ENST00000423569 204 ntBASIC4.37□□□□□ -1.71
SOX2P48431 VDAC1P6-201ENST00000430062 855 ntBASIC4.37□□□□□ -1.71
SOX2P48431 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC4.37□□□□□ -1.71
SOX2P48431 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.37□□□□□ -1.71
SOX2P48431 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.37□□□□□ -1.71
SOX2P48431 AL450023.3-201ENST00000440592 271 ntBASIC4.37□□□□□ -1.71
SOX2P48431 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC4.37□□□□□ -1.71
SOX2P48431 AC073109.1-201ENST00000445066 978 ntBASIC4.37□□□□□ -1.71
SOX2P48431 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.37□□□□□ -1.71
SOX2P48431 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.37□□□□□ -1.71
SOX2P48431 AP000942.1-201ENST00000463969 747 ntBASIC4.37□□□□□ -1.71
SOX2P48431 RN7SL799P-201ENST00000475891 298 ntBASIC4.37□□□□□ -1.71
SOX2P48431 MTCYBP17-201ENST00000503579 789 ntBASIC4.37□□□□□ -1.71
SOX2P48431 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SOX2P48431 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
SOX2P48431 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.37□□□□□ -1.71
SOX2P48431 CBX3P3-201ENST00000508108 532 ntBASIC4.37□□□□□ -1.71
SOX2P48431 AC010625.1-201ENST00000511296 403 ntBASIC4.37□□□□□ -1.71
SOX2P48431 RN7SKP46-201ENST00000515942 234 ntBASIC4.37□□□□□ -1.71
SOX2P48431 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC4.37□□□□□ -1.71
SOX2P48431 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC4.37□□□□□ -1.71
SOX2P48431 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4.37□□□□□ -1.71
SOX2P48431 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.37□□□□□ -1.71
SOX2P48431 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.37□□□□□ -1.71
SOX2P48431 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SOX2P48431 AC090502.2-201ENST00000549267 280 ntBASIC4.37□□□□□ -1.71
SOX2P48431 AC137768.1-201ENST00000549998 553 ntBASIC4.37□□□□□ -1.71
SOX2P48431 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC4.37□□□□□ -1.71
SOX2P48431 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC4.37□□□□□ -1.71
SOX2P48431 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SOX2P48431 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.37□□□□□ -1.71
SOX2P48431 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.37□□□□□ -1.71
SOX2P48431 AC012414.6-201ENST00000568241 401 ntBASIC4.37□□□□□ -1.71
SOX2P48431 AC007599.1-201ENST00000568688 1174 ntBASIC4.37□□□□□ -1.71
SOX2P48431 AP001094.1-201ENST00000579805 193 ntBASIC4.37□□□□□ -1.71
SOX2P48431 KPNA2P3-201ENST00000584190 848 ntBASIC4.37□□□□□ -1.71
SOX2P48431 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.37□□□□□ -1.71
SOX2P48431 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC4.37□□□□□ -1.71
SOX2P48431 AC069307.1-201ENST00000602820 447 ntBASIC4.37□□□□□ -1.71
SOX2P48431 AC104695.2-201ENST00000605056 775 ntBASIC4.37□□□□□ -1.71
SOX2P48431 AC068276.1-201ENST00000605793 379 ntBASIC4.37□□□□□ -1.71
SOX2P48431 AC087752.4-201ENST00000605911 462 ntBASIC4.37□□□□□ -1.71
SOX2P48431 AP001521.1-201ENST00000609150 300 ntBASIC4.37□□□□□ -1.71
SOX2P48431 AC025594.3-201ENST00000613068 790 ntBASIC4.37□□□□□ -1.71
SOX2P48431 AC018816.2-201ENST00000621460 353 ntBASIC4.37□□□□□ -1.71
SOX2P48431 AC231657.1-201ENST00000624313 397 ntBASIC4.37□□□□□ -1.71
SOX2P48431 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.37□□□□□ -1.71
SOX2P48431 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SOX2P48431 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
SOX2P48431 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SOX2P48431 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
SOX2P48431 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
SOX2P48431 MTND4P26-201ENST00000415971 1359 ntBASIC4.37□□□□□ -1.71
SOX2P48431 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC4.37□□□□□ -1.71
SOX2P48431 AL672167.1-203ENST00000641299 2975 ntBASIC4.37□□□□□ -1.71
SOX2P48431 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
SOX2P48431 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SOX2P48431 AC107027.3-201ENST00000565095 3473 ntBASIC4.37□□□□□ -1.71
SOX2P48431 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SOX2P48431 CR383658.2-201ENST00000547576 1525 ntBASIC4.36□□□□□ -1.71
SOX2P48431 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SOX2P48431 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
SOX2P48431 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.36□□□□□ -1.71
SOX2P48431 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
SOX2P48431 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SOX2P48431 LINC00561-201ENST00000565815 2738 ntBASIC4.36□□□□□ -1.71
SOX2P48431 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SOX2P48431 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SOX2P48431 TMSB4XP4-201ENST00000323496 618 ntBASIC4.36□□□□□ -1.71
SOX2P48431 SNORA73.1-201ENST00000363107 205 ntBASIC4.36□□□□□ -1.71
SOX2P48431 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC4.36□□□□□ -1.71
SOX2P48431 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.36□□□□□ -1.71
SOX2P48431 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
SOX2P48431 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms