Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC3.85□□□□□ -1.79
CDX1P47902 CKS1BP5-201ENST00000434172 273 ntBASIC3.85□□□□□ -1.79
CDX1P47902 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC3.85□□□□□ -1.79
CDX1P47902 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.85□□□□□ -1.79
CDX1P47902 OR10R1P-201ENST00000441524 1141 ntBASIC3.85□□□□□ -1.79
CDX1P47902 RPL23AP33-201ENST00000442301 452 ntBASIC3.85□□□□□ -1.79
CDX1P47902 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC3.85□□□□□ -1.79
CDX1P47902 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.85□□□□□ -1.79
CDX1P47902 RPL29P29-201ENST00000448725 423 ntBASIC3.85□□□□□ -1.79
CDX1P47902 OR52J1P-201ENST00000450596 932 ntBASIC3.85□□□□□ -1.79
CDX1P47902 AC009963.2-201ENST00000453431 138 ntBASIC3.85□□□□□ -1.79
CDX1P47902 AC091685.2-201ENST00000454924 864 ntBASIC3.85□□□□□ -1.79
CDX1P47902 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.85□□□□□ -1.79
CDX1P47902 RPL35AP28-201ENST00000459730 331 ntBASIC3.85□□□□□ -1.79
CDX1P47902 RN7SL558P-201ENST00000497468 299 ntBASIC3.85□□□□□ -1.79
CDX1P47902 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC3.85□□□□□ -1.79
CDX1P47902 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CDX1P47902 HNRNPKP5-201ENST00000515300 253 ntBASIC3.85□□□□□ -1.79
CDX1P47902 RNU6-415P-201ENST00000516252 97 ntBASIC3.85□□□□□ -1.79
CDX1P47902 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.85□□□□□ -1.79
CDX1P47902 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.85□□□□□ -1.79
CDX1P47902 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.85□□□□□ -1.79
CDX1P47902 AC012339.2-201ENST00000523996 453 ntBASIC3.85□□□□□ -1.79
CDX1P47902 AP001189.2-201ENST00000527320 189 ntBASIC3.85□□□□□ -1.79
CDX1P47902 AC100770.1-201ENST00000532310 322 ntBASIC3.85□□□□□ -1.79
CDX1P47902 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC3.85□□□□□ -1.79
CDX1P47902 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC3.85□□□□□ -1.79
CDX1P47902 MTCYBP27-201ENST00000555160 670 ntBASIC3.85□□□□□ -1.79
CDX1P47902 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.85□□□□□ -1.79
CDX1P47902 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.85□□□□□ -1.79
CDX1P47902 AC009117.1-201ENST00000563948 554 ntBASIC3.85□□□□□ -1.79
CDX1P47902 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.85□□□□□ -1.79
CDX1P47902 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.85□□□□□ -1.79
CDX1P47902 ELOCP28-201ENST00000590044 317 ntBASIC3.85□□□□□ -1.79
CDX1P47902 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC3.85□□□□□ -1.79
CDX1P47902 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.85□□□□□ -1.79
CDX1P47902 AC105148.1-201ENST00000604961 409 ntBASIC3.85□□□□□ -1.79
CDX1P47902 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.85□□□□□ -1.79
CDX1P47902 FAM25E-202ENST00000608562 189 ntBASIC3.85□□□□□ -1.79
CDX1P47902 AC092954.1-201ENST00000609121 445 ntBASIC3.85□□□□□ -1.79
CDX1P47902 AC090912.3-201ENST00000609775 533 ntBASIC3.85□□□□□ -1.79
CDX1P47902 AL138478.1-201ENST00000612252 832 ntBASIC3.85□□□□□ -1.79
CDX1P47902 AL049794.2-201ENST00000616301 365 ntBASIC3.85□□□□□ -1.79
CDX1P47902 AC087385.3-201ENST00000620477 187 ntBASIC3.85□□□□□ -1.79
CDX1P47902 AC019206.1-201ENST00000621938 425 ntBASIC3.85□□□□□ -1.79
CDX1P47902 AL355578.1-201ENST00000607405 1328 ntBASIC3.85□□□□□ -1.79
CDX1P47902 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC3.85□□□□□ -1.79
CDX1P47902 AL031985.3-201ENST00000565390 2449 ntBASIC3.85□□□□□ -1.79
CDX1P47902 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC3.85□□□□□ -1.79
CDX1P47902 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC3.85□□□□□ -1.79
CDX1P47902 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CDX1P47902 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CDX1P47902 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
CDX1P47902 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC3.84□□□□□ -1.79
CDX1P47902 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC3.84□□□□□ -1.79
CDX1P47902 ZNF29P-201ENST00000225587 168 ntBASIC3.84□□□□□ -1.79
CDX1P47902 RNU6-251P-201ENST00000363235 104 ntBASIC3.84□□□□□ -1.79
CDX1P47902 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
CDX1P47902 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
CDX1P47902 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.79
CDX1P47902 RNA5SP87-201ENST00000384155 118 ntBASIC3.84□□□□□ -1.79
CDX1P47902 MIR1250-201ENST00000408098 113 ntBASIC3.84□□□□□ -1.79
CDX1P47902 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.84□□□□□ -1.79
CDX1P47902 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.84□□□□□ -1.79
CDX1P47902 GTF2IP23-201ENST00000423746 351 ntBASIC3.84□□□□□ -1.79
CDX1P47902 NANOGP5-201ENST00000424456 877 ntBASIC3.84□□□□□ -1.79
CDX1P47902 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC3.84□□□□□ -1.79
CDX1P47902 GTF2IP7-202ENST00000436677 309 ntBASIC3.84□□□□□ -1.79
CDX1P47902 USP9YP22-201ENST00000438971 294 ntBASIC3.84□□□□□ -1.79
CDX1P47902 AL450023.3-201ENST00000440592 271 ntBASIC3.84□□□□□ -1.79
CDX1P47902 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.84□□□□□ -1.79
CDX1P47902 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CDX1P47902 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC3.84□□□□□ -1.79
CDX1P47902 PNPLA4P1-201ENST00000458328 305 ntBASIC3.84□□□□□ -1.79
CDX1P47902 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.84□□□□□ -1.79
CDX1P47902 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC3.84□□□□□ -1.79
CDX1P47902 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.84□□□□□ -1.79
CDX1P47902 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.84□□□□□ -1.79
CDX1P47902 HIGD1AP3-201ENST00000515857 278 ntBASIC3.84□□□□□ -1.79
CDX1P47902 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC3.84□□□□□ -1.79
CDX1P47902 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC3.84□□□□□ -1.79
CDX1P47902 OR5BC1P-201ENST00000529327 739 ntBASIC3.84□□□□□ -1.79
CDX1P47902 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.84□□□□□ -1.79
CDX1P47902 GCSHP4-201ENST00000538792 439 ntBASIC3.84□□□□□ -1.79
CDX1P47902 AC092470.1-201ENST00000546187 132 ntBASIC3.84□□□□□ -1.79
CDX1P47902 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC3.84□□□□□ -1.79
CDX1P47902 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.84□□□□□ -1.79
CDX1P47902 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC3.84□□□□□ -1.79
CDX1P47902 AL049838.1-201ENST00000563647 981 ntBASIC3.84□□□□□ -1.79
CDX1P47902 MIR4737-201ENST00000583979 81 ntBASIC3.84□□□□□ -1.79
CDX1P47902 OR4G1P-201ENST00000588632 938 ntBASIC3.84□□□□□ -1.79
CDX1P47902 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.84□□□□□ -1.79
CDX1P47902 AC104687.2-201ENST00000604442 342 ntBASIC3.84□□□□□ -1.79
CDX1P47902 AC087783.2-201ENST00000605070 562 ntBASIC3.84□□□□□ -1.79
CDX1P47902 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.84□□□□□ -1.79
CDX1P47902 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.84□□□□□ -1.79
CDX1P47902 AC027449.1-201ENST00000608890 407 ntBASIC3.84□□□□□ -1.79
CDX1P47902 AP000240.1-201ENST00000609910 452 ntBASIC3.84□□□□□ -1.79
CDX1P47902 AC100827.5-201ENST00000615883 426 ntBASIC3.84□□□□□ -1.79
CDX1P47902 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms