Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC3.64□□□□□ -1.83
HTTP42858 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC3.64□□□□□ -1.83
HTTP42858 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
HTTP42858 AC083843.3-201ENST00000623679 2186 ntBASIC3.63□□□□□ -1.83
HTTP42858 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC3.63□□□□□ -1.83
HTTP42858 HMGB1P18-201ENST00000438801 619 ntBASIC3.63□□□□□ -1.83
HTTP42858 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.63□□□□□ -1.83
HTTP42858 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HTTP42858 AL139174.1-201ENST00000531489 886 ntBASIC3.63□□□□□ -1.83
HTTP42858 DUXAP6-201ENST00000553858 601 ntBASIC3.63□□□□□ -1.83
HTTP42858 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
HTTP42858 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
HTTP42858 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC3.63□□□□□ -1.83
HTTP42858 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
HTTP42858 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HTTP42858 AC104446.1-201ENST00000613728 1321 ntBASIC3.63□□□□□ -1.83
HTTP42858 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC3.63□□□□□ -1.83
HTTP42858 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
HTTP42858 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.63□□□□□ -1.83
HTTP42858 AL603825.1-201ENST00000438481 80 ntBASIC3.63□□□□□ -1.83
HTTP42858 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.63□□□□□ -1.83
HTTP42858 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.63□□□□□ -1.83
HTTP42858 VN1R90P-201ENST00000595717 726 ntBASIC3.63□□□□□ -1.83
HTTP42858 AL031658.2-201ENST00000616850 651 ntBASIC3.63□□□□□ -1.83
HTTP42858 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HTTP42858 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HTTP42858 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
HTTP42858 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC3.62□□□□□ -1.83
HTTP42858 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
HTTP42858 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC3.62□□□□□ -1.83
HTTP42858 AL445529.1-201ENST00000398713 389 ntBASIC3.62□□□□□ -1.83
HTTP42858 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.62□□□□□ -1.83
HTTP42858 AL513174.1-201ENST00000423182 629 ntBASIC3.62□□□□□ -1.83
HTTP42858 AC104058.1-201ENST00000448028 297 ntBASIC3.62□□□□□ -1.83
HTTP42858 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC3.62□□□□□ -1.83
HTTP42858 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HTTP42858 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.62□□□□□ -1.83
HTTP42858 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.62□□□□□ -1.83
HTTP42858 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.62□□□□□ -1.83
HTTP42858 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
HTTP42858 NMD3P1-201ENST00000439704 1488 ntBASIC3.62□□□□□ -1.83
HTTP42858 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HTTP42858 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HTTP42858 AC096638.2-201ENST00000434965 711 ntBASIC3.62□□□□□ -1.83
HTTP42858 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC3.62□□□□□ -1.83
HTTP42858 AC090602.1-201ENST00000469695 252 ntBASIC3.62□□□□□ -1.83
HTTP42858 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HTTP42858 AC087888.1-201ENST00000550884 1254 ntBASIC3.62□□□□□ -1.83
HTTP42858 AC234778.2-201ENST00000566241 354 ntBASIC3.62□□□□□ -1.83
HTTP42858 IPO8P1-201ENST00000455509 3109 ntBASIC3.62□□□□□ -1.83
HTTP42858 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HTTP42858 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
HTTP42858 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
HTTP42858 AC009313.2-201ENST00000417893 1941 ntBASIC3.62□□□□□ -1.83
HTTP42858 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
HTTP42858 RPL35AP12-201ENST00000425362 338 ntBASIC3.61□□□□□ -1.83
HTTP42858 AC073069.1-201ENST00000428657 441 ntBASIC3.61□□□□□ -1.83
HTTP42858 AC017037.1-201ENST00000508460 471 ntBASIC3.61□□□□□ -1.83
HTTP42858 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.61□□□□□ -1.83
HTTP42858 MIR4524B-201ENST00000581569 115 ntBASIC3.61□□□□□ -1.83
HTTP42858 AC118273.1-201ENST00000525324 3006 ntBASIC3.61□□□□□ -1.83
HTTP42858 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HTTP42858 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC3.61□□□□□ -1.83
HTTP42858 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HTTP42858 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
HTTP42858 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HTTP42858 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC3.61□□□□□ -1.83
HTTP42858 AC007496.3-201ENST00000624987 3443 ntBASIC3.61□□□□□ -1.83
HTTP42858 MIR504-201ENST00000385065 83 ntBASIC3.61□□□□□ -1.83
HTTP42858 MRPL50P2-201ENST00000416821 482 ntBASIC3.61□□□□□ -1.83
HTTP42858 AC233981.1-201ENST00000423224 461 ntBASIC3.61□□□□□ -1.83
HTTP42858 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.61□□□□□ -1.83
HTTP42858 NPM1P17-201ENST00000479221 602 ntBASIC3.61□□□□□ -1.83
HTTP42858 AC068724.1-201ENST00000487100 792 ntBASIC3.61□□□□□ -1.83
HTTP42858 OR6R2P-201ENST00000609216 300 ntBASIC3.61□□□□□ -1.83
HTTP42858 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HTTP42858 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC3.61□□□□□ -1.83
HTTP42858 AC090971.4-201ENST00000560291 1800 ntBASIC3.61□□□□□ -1.83
HTTP42858 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
HTTP42858 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HTTP42858 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HTTP42858 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HTTP42858 SNORA18.3-201ENST00000384122 132 ntBASIC3.61□□□□□ -1.83
HTTP42858 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
HTTP42858 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.61□□□□□ -1.83
HTTP42858 RN7SL20P-201ENST00000488827 297 ntBASIC3.61□□□□□ -1.83
HTTP42858 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HTTP42858 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC3.61□□□□□ -1.83
HTTP42858 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.61□□□□□ -1.83
HTTP42858 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.6□□□□□ -1.83
HTTP42858 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.6□□□□□ -1.83
HTTP42858 AC117440.1-201ENST00000474107 571 ntBASIC3.6□□□□□ -1.83
HTTP42858 RPL7P47-201ENST00000497299 556 ntBASIC3.6□□□□□ -1.83
HTTP42858 AL121766.1-201ENST00000547436 487 ntBASIC3.6□□□□□ -1.83
HTTP42858 ELOCP29-201ENST00000588193 334 ntBASIC3.6□□□□□ -1.83
HTTP42858 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC3.6□□□□□ -1.83
HTTP42858 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HTTP42858 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HTTP42858 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC3.6□□□□□ -1.83
HTTP42858 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms