Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 AC090819.1-201ENST00000523800 1111 ntBASIC3.96□□□□□ -1.78
TNFSF9P41273 CASP1-216ENST00000534497 825 ntTSL 5 BASIC3.96□□□□□ -1.78
TNFSF9P41273 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
TNFSF9P41273 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.96□□□□□ -1.78
TNFSF9P41273 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.96□□□□□ -1.78
TNFSF9P41273 AC074276.2-201ENST00000619891 348 ntBASIC3.96□□□□□ -1.78
TNFSF9P41273 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.96□□□□□ -1.78
TNFSF9P41273 KPNA2P2-201ENST00000419546 1489 ntBASIC3.96□□□□□ -1.78
TNFSF9P41273 AC007656.2-201ENST00000624902 4547 ntBASIC3.96□□□□□ -1.78
TNFSF9P41273 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
TNFSF9P41273 AC074029.4-201ENST00000624796 1859 ntBASIC3.96□□□□□ -1.78
TNFSF9P41273 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
TNFSF9P41273 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
TNFSF9P41273 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
TNFSF9P41273 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.95□□□□□ -1.78
TNFSF9P41273 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
TNFSF9P41273 SAGE2P-201ENST00000420011 2126 ntBASIC3.95□□□□□ -1.78
TNFSF9P41273 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
TNFSF9P41273 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
TNFSF9P41273 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
TNFSF9P41273 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
TNFSF9P41273 AC006504.1-201ENST00000562493 3666 ntBASIC3.95□□□□□ -1.78
TNFSF9P41273 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.95□□□□□ -1.78
TNFSF9P41273 OR52B1P-201ENST00000316506 909 ntBASIC3.95□□□□□ -1.78
TNFSF9P41273 SNORA63.1-201ENST00000362493 131 ntBASIC3.95□□□□□ -1.78
TNFSF9P41273 Y_RNA.333-201ENST00000365274 102 ntBASIC3.95□□□□□ -1.78
TNFSF9P41273 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.95□□□□□ -1.78
TNFSF9P41273 MIR7-3-201ENST00000384898 110 ntBASIC3.95□□□□□ -1.78
TNFSF9P41273 RNU6-244P-201ENST00000391028 104 ntBASIC3.95□□□□□ -1.78
TNFSF9P41273 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC3.95□□□□□ -1.78
TNFSF9P41273 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
TNFSF9P41273 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.95□□□□□ -1.78
TNFSF9P41273 NDUFA5P10-201ENST00000432147 357 ntBASIC3.95□□□□□ -1.78
TNFSF9P41273 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC3.95□□□□□ -1.78
TNFSF9P41273 AC239809.1-201ENST00000450470 217 ntBASIC3.95□□□□□ -1.78
TNFSF9P41273 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
TNFSF9P41273 CREM-230ENST00000474931 626 ntTSL 2 BASIC3.95□□□□□ -1.78
TNFSF9P41273 AC106707.2-201ENST00000484182 374 ntBASIC3.95□□□□□ -1.78
TNFSF9P41273 PANCR-201ENST00000503456 493 ntTSL 5 BASIC3.95□□□□□ -1.78
TNFSF9P41273 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.95□□□□□ -1.78
TNFSF9P41273 HMGB3P13-201ENST00000511263 607 ntBASIC3.95□□□□□ -1.78
TNFSF9P41273 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC3.95□□□□□ -1.78
TNFSF9P41273 RNU6-1308P-201ENST00000516817 103 ntBASIC3.95□□□□□ -1.78
TNFSF9P41273 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.95□□□□□ -1.78
TNFSF9P41273 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC3.95□□□□□ -1.78
TNFSF9P41273 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.95□□□□□ -1.78
TNFSF9P41273 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC3.95□□□□□ -1.78
TNFSF9P41273 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.95□□□□□ -1.78
TNFSF9P41273 AC067931.1-201ENST00000624190 671 ntBASIC3.95□□□□□ -1.78
TNFSF9P41273 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.95□□□□□ -1.78
TNFSF9P41273 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC3.95□□□□□ -1.78
TNFSF9P41273 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
TNFSF9P41273 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
TNFSF9P41273 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
TNFSF9P41273 AL627171.1-201ENST00000618845 1308 ntBASIC3.95□□□□□ -1.78
TNFSF9P41273 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
TNFSF9P41273 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
TNFSF9P41273 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.94□□□□□ -1.78
TNFSF9P41273 RNU6-761P-201ENST00000384148 107 ntBASIC3.94□□□□□ -1.78
TNFSF9P41273 HMGN2P8-201ENST00000391458 268 ntBASIC3.94□□□□□ -1.78
TNFSF9P41273 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC3.94□□□□□ -1.78
TNFSF9P41273 RPL26P37-201ENST00000411983 438 ntBASIC3.94□□□□□ -1.78
TNFSF9P41273 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC3.94□□□□□ -1.78
TNFSF9P41273 RPL21P109-201ENST00000422213 475 ntBASIC3.94□□□□□ -1.78
TNFSF9P41273 MTND2P11-201ENST00000423638 648 ntBASIC3.94□□□□□ -1.78
TNFSF9P41273 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.94□□□□□ -1.78
TNFSF9P41273 NPM1P24-201ENST00000428039 894 ntBASIC3.94□□□□□ -1.78
TNFSF9P41273 AC007563.3-201ENST00000433233 371 ntBASIC3.94□□□□□ -1.78
TNFSF9P41273 AF228730.2-201ENST00000438784 848 ntBASIC3.94□□□□□ -1.78
TNFSF9P41273 RPL23AP12-201ENST00000467573 473 ntBASIC3.94□□□□□ -1.78
TNFSF9P41273 AC005726.1-201ENST00000494679 427 ntBASIC3.94□□□□□ -1.78
TNFSF9P41273 AC021087.2-201ENST00000504656 1203 ntBASIC3.94□□□□□ -1.78
TNFSF9P41273 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC3.94□□□□□ -1.78
TNFSF9P41273 RN7SKP18-201ENST00000516005 275 ntBASIC3.94□□□□□ -1.78
TNFSF9P41273 VTA1P2-201ENST00000520205 911 ntBASIC3.94□□□□□ -1.78
TNFSF9P41273 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.94□□□□□ -1.78
TNFSF9P41273 AP000619.3-201ENST00000535634 1127 ntBASIC3.94□□□□□ -1.78
TNFSF9P41273 AL121766.1-201ENST00000547436 487 ntBASIC3.94□□□□□ -1.78
TNFSF9P41273 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC3.94□□□□□ -1.78
TNFSF9P41273 AC012314.7-201ENST00000619693 93 ntBASIC3.94□□□□□ -1.78
TNFSF9P41273 AC009093.8-201ENST00000641769 292 ntBASIC3.94□□□□□ -1.78
TNFSF9P41273 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.94□□□□□ -1.78
TNFSF9P41273 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
TNFSF9P41273 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.94□□□□□ -1.78
TNFSF9P41273 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
TNFSF9P41273 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
TNFSF9P41273 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.94□□□□□ -1.78
TNFSF9P41273 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
TNFSF9P41273 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC3.93□□□□□ -1.78
TNFSF9P41273 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC3.93□□□□□ -1.78
TNFSF9P41273 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.93□□□□□ -1.78
TNFSF9P41273 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.93□□□□□ -1.78
TNFSF9P41273 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.93□□□□□ -1.78
TNFSF9P41273 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
TNFSF9P41273 RNA5SP119-201ENST00000362715 117 ntBASIC3.93□□□□□ -1.78
TNFSF9P41273 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
TNFSF9P41273 TRGV6-201ENST00000417928 299 ntBASIC3.93□□□□□ -1.78
TNFSF9P41273 AC009965.2-201ENST00000425328 970 ntBASIC3.93□□□□□ -1.78
TNFSF9P41273 AL138785.1-201ENST00000425821 331 ntBASIC3.93□□□□□ -1.78
TNFSF9P41273 IFNNP1-201ENST00000429219 553 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms