Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.84□□□□□ -1.79
RORAP35398 OR5BE1P-201ENST00000425977 939 ntBASIC3.84□□□□□ -1.79
RORAP35398 HMGB3P5-201ENST00000428894 612 ntBASIC3.84□□□□□ -1.79
RORAP35398 AL358472.1-201ENST00000431295 329 ntBASIC3.84□□□□□ -1.79
RORAP35398 USP9YP7-201ENST00000436723 430 ntBASIC3.84□□□□□ -1.79
RORAP35398 USP9YP32-201ENST00000452432 430 ntBASIC3.84□□□□□ -1.79
RORAP35398 HGF-207ENST00000453018 721 ntTSL 3 BASIC3.84□□□□□ -1.79
RORAP35398 SNORA84-201ENST00000459229 133 ntBASIC3.84□□□□□ -1.79
RORAP35398 RN7SL542P-201ENST00000467147 294 ntBASIC3.84□□□□□ -1.79
RORAP35398 RN7SL132P-201ENST00000478131 296 ntBASIC3.84□□□□□ -1.79
RORAP35398 AC006517.1-201ENST00000480485 328 ntBASIC3.84□□□□□ -1.79
RORAP35398 AC110792.1-201ENST00000491826 472 ntBASIC3.84□□□□□ -1.79
RORAP35398 RPL30P11-201ENST00000495304 339 ntBASIC3.84□□□□□ -1.79
RORAP35398 RPL29P14-201ENST00000495837 428 ntBASIC3.84□□□□□ -1.79
RORAP35398 MTATP6P22-201ENST00000507369 598 ntBASIC3.84□□□□□ -1.79
RORAP35398 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC3.84□□□□□ -1.79
RORAP35398 RNU6-889P-201ENST00000517189 103 ntBASIC3.84□□□□□ -1.79
RORAP35398 PTP4A1P6-201ENST00000531034 478 ntBASIC3.84□□□□□ -1.79
RORAP35398 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.84□□□□□ -1.79
RORAP35398 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.84□□□□□ -1.79
RORAP35398 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC3.84□□□□□ -1.79
RORAP35398 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
RORAP35398 AC074050.1-201ENST00000563247 211 ntBASIC3.84□□□□□ -1.79
RORAP35398 AC141257.3-201ENST00000572906 215 ntBASIC3.84□□□□□ -1.79
RORAP35398 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.84□□□□□ -1.79
RORAP35398 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.84□□□□□ -1.79
RORAP35398 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.84□□□□□ -1.79
RORAP35398 AP003117.2-201ENST00000606010 545 ntBASIC3.84□□□□□ -1.79
RORAP35398 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.84□□□□□ -1.79
RORAP35398 MIR6868-201ENST00000611215 58 ntBASIC3.84□□□□□ -1.79
RORAP35398 OR5BE1P-202ENST00000641168 1176 ntBASIC3.84□□□□□ -1.79
RORAP35398 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
RORAP35398 AL122126.1-201ENST00000546905 1318 ntBASIC3.84□□□□□ -1.79
RORAP35398 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.79
RORAP35398 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.84□□□□□ -1.79
RORAP35398 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
RORAP35398 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.84□□□□□ -1.8
RORAP35398 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
RORAP35398 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.84□□□□□ -1.8
RORAP35398 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
RORAP35398 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.84□□□□□ -1.8
RORAP35398 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RORAP35398 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RORAP35398 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RORAP35398 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
RORAP35398 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RORAP35398 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.83□□□□□ -1.8
RORAP35398 AL589655.1-201ENST00000405398 482 ntBASIC3.83□□□□□ -1.8
RORAP35398 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.83□□□□□ -1.8
RORAP35398 TRIM60P13-201ENST00000432350 1283 ntBASIC3.83□□□□□ -1.8
RORAP35398 MTCO1P52-201ENST00000433928 531 ntBASIC3.83□□□□□ -1.8
RORAP35398 ELOCP11-201ENST00000436690 332 ntBASIC3.83□□□□□ -1.8
RORAP35398 ELOCP16-201ENST00000444494 332 ntBASIC3.83□□□□□ -1.8
RORAP35398 AC044797.1-201ENST00000445744 679 ntBASIC3.83□□□□□ -1.8
RORAP35398 Z95327.1-201ENST00000446082 482 ntBASIC3.83□□□□□ -1.8
RORAP35398 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC3.83□□□□□ -1.8
RORAP35398 MTND2P25-201ENST00000449028 610 ntBASIC3.83□□□□□ -1.8
RORAP35398 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.83□□□□□ -1.8
RORAP35398 HMGB1P26-201ENST00000452520 628 ntBASIC3.83□□□□□ -1.8
RORAP35398 HMGB3P30-201ENST00000457863 606 ntBASIC3.83□□□□□ -1.8
RORAP35398 RN7SL271P-201ENST00000487601 295 ntBASIC3.83□□□□□ -1.8
RORAP35398 NIPA2P2-201ENST00000496376 1083 ntBASIC3.83□□□□□ -1.8
RORAP35398 FTH1P24-201ENST00000503502 462 ntBASIC3.83□□□□□ -1.8
RORAP35398 MTND4LP31-201ENST00000514859 294 ntBASIC3.83□□□□□ -1.8
RORAP35398 RNU6-1004P-201ENST00000516584 111 ntBASIC3.83□□□□□ -1.8
RORAP35398 RNU7-143P-201ENST00000516781 65 ntBASIC3.83□□□□□ -1.8
RORAP35398 MTND1P6-201ENST00000523621 946 ntBASIC3.83□□□□□ -1.8
RORAP35398 OR4C2P-201ENST00000530855 1064 ntBASIC3.83□□□□□ -1.8
RORAP35398 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC3.83□□□□□ -1.8
RORAP35398 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.83□□□□□ -1.8
RORAP35398 RPL23AP87-202ENST00000573039 466 ntBASIC3.83□□□□□ -1.8
RORAP35398 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC3.83□□□□□ -1.8
RORAP35398 AP003117.1-201ENST00000602771 554 ntBASIC3.83□□□□□ -1.8
RORAP35398 AC245389.1-201ENST00000605141 529 ntBASIC3.83□□□□□ -1.8
RORAP35398 AC090246.1-201ENST00000616499 426 ntBASIC3.83□□□□□ -1.8
RORAP35398 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RORAP35398 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC3.83□□□□□ -1.8
RORAP35398 AC008785.1-201ENST00000624475 456 ntBASIC3.83□□□□□ -1.8
RORAP35398 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
RORAP35398 MTND4P10-201ENST00000446199 1363 ntBASIC3.83□□□□□ -1.8
RORAP35398 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RORAP35398 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RORAP35398 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RORAP35398 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RORAP35398 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RORAP35398 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RORAP35398 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RORAP35398 RNU6-213P-201ENST00000384051 104 ntBASIC3.82□□□□□ -1.8
RORAP35398 RNU6-40P-201ENST00000384254 107 ntBASIC3.82□□□□□ -1.8
RORAP35398 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
RORAP35398 PGBD4P8-201ENST00000412993 562 ntBASIC3.82□□□□□ -1.8
RORAP35398 RANP4-201ENST00000413361 655 ntBASIC3.82□□□□□ -1.8
RORAP35398 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC3.82□□□□□ -1.8
RORAP35398 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.82□□□□□ -1.8
RORAP35398 TBCAP1-201ENST00000436520 327 ntBASIC3.82□□□□□ -1.8
RORAP35398 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.82□□□□□ -1.8
RORAP35398 RPL21P103-201ENST00000479921 488 ntBASIC3.82□□□□□ -1.8
RORAP35398 AC068305.1-201ENST00000497406 726 ntBASIC3.82□□□□□ -1.8
RORAP35398 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.82□□□□□ -1.8
RORAP35398 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms