Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 AC106730.3-201ENST00000624568 641 ntBASIC4.45□□□□□ -1.7
CTNNA1P35221 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.45□□□□□ -1.7
CTNNA1P35221 AC140479.6-201ENST00000633535 357 ntBASIC4.45□□□□□ -1.7
CTNNA1P35221 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
CTNNA1P35221 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.45□□□□□ -1.7
CTNNA1P35221 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CTNNA1P35221 MARK2P15-201ENST00000432204 2186 ntBASIC4.44□□□□□ -1.7
CTNNA1P35221 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CTNNA1P35221 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CTNNA1P35221 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.44□□□□□ -1.7
CTNNA1P35221 RNVU1-6-201ENST00000364688 164 ntBASIC4.44□□□□□ -1.7
CTNNA1P35221 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CTNNA1P35221 MIR129-1-201ENST00000384972 72 ntBASIC4.44□□□□□ -1.7
CTNNA1P35221 FABP12P1-201ENST00000401911 322 ntBASIC4.44□□□□□ -1.7
CTNNA1P35221 RPL31P2-201ENST00000413849 377 ntBASIC4.44□□□□□ -1.7
CTNNA1P35221 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC4.44□□□□□ -1.7
CTNNA1P35221 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.44□□□□□ -1.7
CTNNA1P35221 MTCYBP24-201ENST00000420387 1106 ntBASIC4.44□□□□□ -1.7
CTNNA1P35221 AC246680.2-201ENST00000422106 389 ntBASIC4.44□□□□□ -1.7
CTNNA1P35221 AL157831.1-201ENST00000426134 473 ntBASIC4.44□□□□□ -1.7
CTNNA1P35221 AL009174.1-201ENST00000426577 416 ntBASIC4.44□□□□□ -1.7
CTNNA1P35221 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.44□□□□□ -1.7
CTNNA1P35221 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC4.44□□□□□ -1.7
CTNNA1P35221 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.44□□□□□ -1.7
CTNNA1P35221 HMGB3P22-202ENST00000451823 572 ntBASIC4.44□□□□□ -1.7
CTNNA1P35221 AL121877.1-201ENST00000453704 622 ntBASIC4.44□□□□□ -1.7
CTNNA1P35221 RPL23AP81-201ENST00000455252 467 ntBASIC4.44□□□□□ -1.7
CTNNA1P35221 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC4.44□□□□□ -1.7
CTNNA1P35221 RPL32P9-201ENST00000487963 407 ntBASIC4.44□□□□□ -1.7
CTNNA1P35221 TPT1P3-201ENST00000492841 512 ntBASIC4.44□□□□□ -1.7
CTNNA1P35221 RNF138P1-201ENST00000502765 546 ntBASIC4.44□□□□□ -1.7
CTNNA1P35221 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
CTNNA1P35221 PRELID3BP4-201ENST00000515476 571 ntBASIC4.44□□□□□ -1.7
CTNNA1P35221 RNU6-416P-201ENST00000516265 103 ntBASIC4.44□□□□□ -1.7
CTNNA1P35221 OR8G5-201ENST00000524943 1041 ntBASIC4.44□□□□□ -1.7
CTNNA1P35221 AC004217.3-201ENST00000551552 878 ntBASIC4.44□□□□□ -1.7
CTNNA1P35221 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.44□□□□□ -1.7
CTNNA1P35221 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.44□□□□□ -1.7
CTNNA1P35221 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.44□□□□□ -1.7
CTNNA1P35221 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC4.44□□□□□ -1.7
CTNNA1P35221 AL049539.1-201ENST00000611964 459 ntBASIC4.44□□□□□ -1.7
CTNNA1P35221 AL121890.3-201ENST00000618494 516 ntBASIC4.44□□□□□ -1.7
CTNNA1P35221 AL445363.3-201ENST00000623080 671 ntBASIC4.44□□□□□ -1.7
CTNNA1P35221 AL356121.2-201ENST00000624715 780 ntBASIC4.44□□□□□ -1.7
CTNNA1P35221 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
CTNNA1P35221 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.44□□□□□ -1.7
CTNNA1P35221 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CTNNA1P35221 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.44□□□□□ -1.7
CTNNA1P35221 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CTNNA1P35221 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.43□□□□□ -1.7
CTNNA1P35221 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CTNNA1P35221 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC4.43□□□□□ -1.7
CTNNA1P35221 AC079741.1-201ENST00000321498 212 ntBASIC4.43□□□□□ -1.7
CTNNA1P35221 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
CTNNA1P35221 AC007685.1-201ENST00000329806 452 ntBASIC4.43□□□□□ -1.7
CTNNA1P35221 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
CTNNA1P35221 UBE2D3P3-201ENST00000426992 425 ntBASIC4.43□□□□□ -1.7
CTNNA1P35221 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.43□□□□□ -1.7
CTNNA1P35221 AL512326.1-201ENST00000443050 721 ntBASIC4.43□□□□□ -1.7
CTNNA1P35221 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.43□□□□□ -1.7
CTNNA1P35221 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC4.43□□□□□ -1.7
CTNNA1P35221 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.43□□□□□ -1.7
CTNNA1P35221 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.43□□□□□ -1.7
CTNNA1P35221 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.43□□□□□ -1.7
CTNNA1P35221 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.43□□□□□ -1.7
CTNNA1P35221 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.43□□□□□ -1.7
CTNNA1P35221 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.43□□□□□ -1.7
CTNNA1P35221 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CTNNA1P35221 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.43□□□□□ -1.7
CTNNA1P35221 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CTNNA1P35221 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.43□□□□□ -1.7
CTNNA1P35221 AP006289.1-201ENST00000538089 277 ntBASIC4.43□□□□□ -1.7
CTNNA1P35221 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.43□□□□□ -1.7
CTNNA1P35221 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.43□□□□□ -1.7
CTNNA1P35221 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.43□□□□□ -1.7
CTNNA1P35221 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC4.43□□□□□ -1.7
CTNNA1P35221 AGGF1P8-201ENST00000562979 1000 ntBASIC4.43□□□□□ -1.7
CTNNA1P35221 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.43□□□□□ -1.7
CTNNA1P35221 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.43□□□□□ -1.7
CTNNA1P35221 AC090616.5-202ENST00000582111 297 ntBASIC4.43□□□□□ -1.7
CTNNA1P35221 AL021707.7-201ENST00000607991 416 ntBASIC4.43□□□□□ -1.7
CTNNA1P35221 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.43□□□□□ -1.7
CTNNA1P35221 AC078899.5-201ENST00000612475 178 ntBASIC4.43□□□□□ -1.7
CTNNA1P35221 AL121873.1-201ENST00000616013 524 ntBASIC4.43□□□□□ -1.7
CTNNA1P35221 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.43□□□□□ -1.7
CTNNA1P35221 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.43□□□□□ -1.7
CTNNA1P35221 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
CTNNA1P35221 ZNF849P-201ENST00000594711 1566 ntBASIC4.43□□□□□ -1.7
CTNNA1P35221 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CTNNA1P35221 AC008725.1-201ENST00000605123 2263 ntBASIC4.43□□□□□ -1.7
CTNNA1P35221 SEPT7P7-201ENST00000420492 1301 ntBASIC4.43□□□□□ -1.7
CTNNA1P35221 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CTNNA1P35221 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.42□□□□□ -1.7
CTNNA1P35221 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CTNNA1P35221 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
CTNNA1P35221 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.42□□□□□ -1.7
CTNNA1P35221 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
CTNNA1P35221 SSXP10-201ENST00000402595 565 ntBASIC4.42□□□□□ -1.7
CTNNA1P35221 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.42□□□□□ -1.7
CTNNA1P35221 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms