Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC6.72□□□□□ -1.33
RFX1P22670 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
RFX1P22670 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
RFX1P22670 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
RFX1P22670 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC6.72□□□□□ -1.33
RFX1P22670 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
RFX1P22670 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.71□□□□□ -1.33
RFX1P22670 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.33
RFX1P22670 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
RFX1P22670 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.71□□□□□ -1.33
RFX1P22670 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
RFX1P22670 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.33
RFX1P22670 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.71□□□□□ -1.33
RFX1P22670 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
RFX1P22670 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.71□□□□□ -1.34
RFX1P22670 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
RFX1P22670 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
RFX1P22670 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
RFX1P22670 SNORA43.1-201ENST00000364863 140 ntBASIC6.71□□□□□ -1.34
RFX1P22670 ARL4AP5-201ENST00000404372 599 ntBASIC6.71□□□□□ -1.34
RFX1P22670 RPL31P52-201ENST00000407532 367 ntBASIC6.71□□□□□ -1.34
RFX1P22670 NMD3P2-201ENST00000421815 761 ntBASIC6.71□□□□□ -1.34
RFX1P22670 CHEK2P5-201ENST00000423877 246 ntBASIC6.71□□□□□ -1.34
RFX1P22670 AC137499.1-201ENST00000427602 88 ntBASIC6.71□□□□□ -1.34
RFX1P22670 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC6.71□□□□□ -1.34
RFX1P22670 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC6.71□□□□□ -1.34
RFX1P22670 GPR143P-201ENST00000434155 205 ntBASIC6.71□□□□□ -1.34
RFX1P22670 CEACAMP1-201ENST00000434624 1035 ntBASIC6.71□□□□□ -1.34
RFX1P22670 PNKDP1-201ENST00000435914 430 ntBASIC6.71□□□□□ -1.34
RFX1P22670 AL450996.1-201ENST00000445574 1202 ntBASIC6.71□□□□□ -1.34
RFX1P22670 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC6.71□□□□□ -1.34
RFX1P22670 AC239809.1-201ENST00000450470 217 ntBASIC6.71□□□□□ -1.34
RFX1P22670 snoU13.8-201ENST00000458890 104 ntBASIC6.71□□□□□ -1.34
RFX1P22670 AC063943.1-201ENST00000465434 453 ntBASIC6.71□□□□□ -1.34
RFX1P22670 AC006539.1-201ENST00000481419 501 ntBASIC6.71□□□□□ -1.34
RFX1P22670 PPIAP19-201ENST00000486414 492 ntBASIC6.71□□□□□ -1.34
RFX1P22670 FGF7P4-201ENST00000509595 295 ntBASIC6.71□□□□□ -1.34
RFX1P22670 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.71□□□□□ -1.34
RFX1P22670 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC6.71□□□□□ -1.34
RFX1P22670 SNORA40.12-201ENST00000516329 111 ntBASIC6.71□□□□□ -1.34
RFX1P22670 ODF1-202ENST00000518835 368 ntTSL 3 BASIC6.71□□□□□ -1.34
RFX1P22670 AP001858.2-201ENST00000536213 601 ntBASIC6.71□□□□□ -1.34
RFX1P22670 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.71□□□□□ -1.34
RFX1P22670 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
RFX1P22670 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC6.71□□□□□ -1.34
RFX1P22670 MRPS21P8-201ENST00000569196 235 ntBASIC6.71□□□□□ -1.34
RFX1P22670 AC127024.5-201ENST00000580085 462 ntBASIC6.71□□□□□ -1.34
RFX1P22670 AC011712.1-201ENST00000588959 234 ntBASIC6.71□□□□□ -1.34
RFX1P22670 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC6.71□□□□□ -1.34
RFX1P22670 AC078795.3-201ENST00000602913 472 ntBASIC6.71□□□□□ -1.34
RFX1P22670 AC005034.5-201ENST00000604219 466 ntBASIC6.71□□□□□ -1.34
RFX1P22670 AL391813.2-201ENST00000609113 322 ntBASIC6.71□□□□□ -1.34
RFX1P22670 AC092266.1-201ENST00000610958 165 ntBASIC6.71□□□□□ -1.34
RFX1P22670 DISC2.1-201ENST00000612827 205 ntBASIC6.71□□□□□ -1.34
RFX1P22670 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.71□□□□□ -1.34
RFX1P22670 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
RFX1P22670 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
RFX1P22670 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.71□□□□□ -1.34
RFX1P22670 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
RFX1P22670 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
RFX1P22670 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
RFX1P22670 TEK-204ENST00000519097 3836 ntTSL 2 BASIC6.71□□□□□ -1.34
RFX1P22670 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
RFX1P22670 AC007529.1-201ENST00000418574 2178 ntBASIC6.71□□□□□ -1.34
RFX1P22670 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
RFX1P22670 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
RFX1P22670 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
RFX1P22670 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.71□□□□□ -1.34
RFX1P22670 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
RFX1P22670 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RFX1P22670 AC027575.3-201ENST00000583058 2747 ntBASIC6.7□□□□□ -1.34
RFX1P22670 ST7-212ENST00000422922 1887 ntTSL 5 BASIC6.7□□□□□ -1.34
RFX1P22670 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RFX1P22670 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC6.7□□□□□ -1.34
RFX1P22670 AL138820.1-201ENST00000617901 5305 ntBASIC6.7□□□□□ -1.34
RFX1P22670 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
RFX1P22670 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
RFX1P22670 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
RFX1P22670 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.7□□□□□ -1.34
RFX1P22670 AC027228.2-201ENST00000567141 2154 ntBASIC6.7□□□□□ -1.34
RFX1P22670 Y_RNA.157-201ENST00000363638 102 ntBASIC6.7□□□□□ -1.34
RFX1P22670 RNU6-1207P-201ENST00000384343 107 ntBASIC6.7□□□□□ -1.34
RFX1P22670 RPL23AP17-201ENST00000401064 499 ntBASIC6.7□□□□□ -1.34
RFX1P22670 Z97832.1-201ENST00000402490 328 ntBASIC6.7□□□□□ -1.34
RFX1P22670 OR9R1P-201ENST00000412200 877 ntBASIC6.7□□□□□ -1.34
RFX1P22670 PSMA6P3-201ENST00000428242 164 ntBASIC6.7□□□□□ -1.34
RFX1P22670 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
RFX1P22670 AC006335.2-201ENST00000437993 330 ntBASIC6.7□□□□□ -1.34
RFX1P22670 PPIAP10-201ENST00000438675 458 ntBASIC6.7□□□□□ -1.34
RFX1P22670 ATP5LP2-201ENST00000440646 311 ntBASIC6.7□□□□□ -1.34
RFX1P22670 AC073109.1-201ENST00000445066 978 ntBASIC6.7□□□□□ -1.34
RFX1P22670 NOP56P2-201ENST00000447491 769 ntBASIC6.7□□□□□ -1.34
RFX1P22670 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
RFX1P22670 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.7□□□□□ -1.34
RFX1P22670 AC023194.2-201ENST00000465398 406 ntBASIC6.7□□□□□ -1.34
RFX1P22670 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC6.7□□□□□ -1.34
RFX1P22670 LSM3P4-201ENST00000502948 309 ntBASIC6.7□□□□□ -1.34
RFX1P22670 RN7SKP67-201ENST00000515905 235 ntBASIC6.7□□□□□ -1.34
RFX1P22670 AC090572.1-201ENST00000519251 160 ntBASIC6.7□□□□□ -1.34
RFX1P22670 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms