Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC4.78□□□□□ -1.64
HOXC6P09630 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC4.78□□□□□ -1.64
HOXC6P09630 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.78□□□□□ -1.64
HOXC6P09630 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.78□□□□□ -1.64
HOXC6P09630 HIGD1AP4-201ENST00000430194 280 ntBASIC4.78□□□□□ -1.64
HOXC6P09630 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.78□□□□□ -1.64
HOXC6P09630 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC4.78□□□□□ -1.64
HOXC6P09630 PPIAP13-201ENST00000434706 478 ntBASIC4.78□□□□□ -1.64
HOXC6P09630 RPL23AP46-201ENST00000438548 490 ntBASIC4.78□□□□□ -1.64
HOXC6P09630 AL096803.2-201ENST00000450032 677 ntBASIC4.78□□□□□ -1.64
HOXC6P09630 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC4.78□□□□□ -1.64
HOXC6P09630 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.78□□□□□ -1.64
HOXC6P09630 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC4.78□□□□□ -1.64
HOXC6P09630 RPL7P22-201ENST00000466005 733 ntBASIC4.78□□□□□ -1.64
HOXC6P09630 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC4.78□□□□□ -1.64
HOXC6P09630 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.78□□□□□ -1.64
HOXC6P09630 RNA5SP360-201ENST00000516555 118 ntBASIC4.78□□□□□ -1.64
HOXC6P09630 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.78□□□□□ -1.64
HOXC6P09630 OR4A2P-201ENST00000527276 913 ntBASIC4.78□□□□□ -1.64
HOXC6P09630 AC006064.5-201ENST00000541782 248 ntBASIC4.78□□□□□ -1.64
HOXC6P09630 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC4.78□□□□□ -1.64
HOXC6P09630 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC4.78□□□□□ -1.64
HOXC6P09630 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.78□□□□□ -1.64
HOXC6P09630 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.78□□□□□ -1.64
HOXC6P09630 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC4.78□□□□□ -1.64
HOXC6P09630 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.78□□□□□ -1.64
HOXC6P09630 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.78□□□□□ -1.64
HOXC6P09630 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.78□□□□□ -1.64
HOXC6P09630 ZNF92P3-201ENST00000596594 954 ntBASIC4.78□□□□□ -1.64
HOXC6P09630 AC021171.1-201ENST00000603137 706 ntBASIC4.78□□□□□ -1.64
HOXC6P09630 AL606490.9-201ENST00000603331 271 ntBASIC4.78□□□□□ -1.64
HOXC6P09630 SUMO2P14-201ENST00000604488 293 ntBASIC4.78□□□□□ -1.64
HOXC6P09630 AC079610.2-201ENST00000604818 690 ntBASIC4.78□□□□□ -1.64
HOXC6P09630 Z98200.1-201ENST00000607298 470 ntBASIC4.78□□□□□ -1.64
HOXC6P09630 AC092106.3-201ENST00000611308 722 ntBASIC4.78□□□□□ -1.64
HOXC6P09630 AC013470.4-201ENST00000619978 986 ntBASIC4.78□□□□□ -1.64
HOXC6P09630 AC017037.3-201ENST00000625016 472 ntBASIC4.78□□□□□ -1.64
HOXC6P09630 AL121594.5-201ENST00000631724 573 ntBASIC4.78□□□□□ -1.64
HOXC6P09630 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
HOXC6P09630 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.65
HOXC6P09630 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
HOXC6P09630 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HOXC6P09630 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HOXC6P09630 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
HOXC6P09630 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HOXC6P09630 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
HOXC6P09630 CD2-201ENST00000369477 478 ntTSL 2 BASIC4.77□□□□□ -1.65
HOXC6P09630 U6.112-201ENST00000384129 70 ntBASIC4.77□□□□□ -1.65
HOXC6P09630 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC4.77□□□□□ -1.65
HOXC6P09630 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
HOXC6P09630 RPL26P37-201ENST00000411983 438 ntBASIC4.77□□□□□ -1.65
HOXC6P09630 AC009518.2-201ENST00000418056 731 ntBASIC4.77□□□□□ -1.65
HOXC6P09630 MTCYBP7-201ENST00000419540 1134 ntBASIC4.77□□□□□ -1.65
HOXC6P09630 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HOXC6P09630 AL445584.1-201ENST00000431451 330 ntBASIC4.77□□□□□ -1.65
HOXC6P09630 VN1R108P-201ENST00000431580 830 ntBASIC4.77□□□□□ -1.65
HOXC6P09630 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
HOXC6P09630 AL500522.2-201ENST00000448562 343 ntBASIC4.77□□□□□ -1.65
HOXC6P09630 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.77□□□□□ -1.65
HOXC6P09630 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC4.77□□□□□ -1.65
HOXC6P09630 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC4.77□□□□□ -1.65
HOXC6P09630 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HOXC6P09630 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.77□□□□□ -1.65
HOXC6P09630 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.77□□□□□ -1.65
HOXC6P09630 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC4.77□□□□□ -1.65
HOXC6P09630 Y_RNA.688-201ENST00000516565 95 ntBASIC4.77□□□□□ -1.65
HOXC6P09630 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.77□□□□□ -1.65
HOXC6P09630 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC4.77□□□□□ -1.65
HOXC6P09630 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC4.77□□□□□ -1.65
HOXC6P09630 CYCSP28-201ENST00000534284 321 ntBASIC4.77□□□□□ -1.65
HOXC6P09630 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.77□□□□□ -1.65
HOXC6P09630 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.77□□□□□ -1.65
HOXC6P09630 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC4.77□□□□□ -1.65
HOXC6P09630 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.77□□□□□ -1.65
HOXC6P09630 MIR5685-201ENST00000579080 79 ntBASIC4.77□□□□□ -1.65
HOXC6P09630 AC025165.5-201ENST00000602802 578 ntBASIC4.77□□□□□ -1.65
HOXC6P09630 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.77□□□□□ -1.65
HOXC6P09630 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC4.77□□□□□ -1.65
HOXC6P09630 AC245008.1-201ENST00000608123 476 ntBASIC4.77□□□□□ -1.65
HOXC6P09630 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HOXC6P09630 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HOXC6P09630 AC140113.4-201ENST00000622087 222 ntBASIC4.77□□□□□ -1.65
HOXC6P09630 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.77□□□□□ -1.65
HOXC6P09630 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HOXC6P09630 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HOXC6P09630 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.77□□□□□ -1.65
HOXC6P09630 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HOXC6P09630 AC126323.6-202ENST00000568092 3511 ntBASIC4.77□□□□□ -1.65
HOXC6P09630 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.77□□□□□ -1.65
HOXC6P09630 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
HOXC6P09630 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HOXC6P09630 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.76□□□□□ -1.65
HOXC6P09630 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HOXC6P09630 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.76□□□□□ -1.65
HOXC6P09630 EOGT-210ENST00000615922 1931 ntBASIC4.76□□□□□ -1.65
HOXC6P09630 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
HOXC6P09630 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HOXC6P09630 SNORD116-8-201ENST00000384365 95 ntBASIC4.76□□□□□ -1.65
HOXC6P09630 RNU1-44P-201ENST00000384453 163 ntBASIC4.76□□□□□ -1.65
HOXC6P09630 MIR200C-201ENST00000384980 68 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms