Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RETP07949 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RETP07949 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
RETP07949 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.02□□□□□ -1.77
RETP07949 AC018555.1-201ENST00000567548 1980 ntBASIC4.02□□□□□ -1.77
RETP07949 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.02□□□□□ -1.77
RETP07949 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RETP07949 RNU4-7P-201ENST00000364758 141 ntBASIC4.02□□□□□ -1.77
RETP07949 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
RETP07949 RNU6-891P-201ENST00000384280 111 ntBASIC4.02□□□□□ -1.77
RETP07949 MIR218-2-201ENST00000385006 110 ntBASIC4.02□□□□□ -1.77
RETP07949 SNORA3.3-201ENST00000408712 125 ntBASIC4.02□□□□□ -1.77
RETP07949 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.02□□□□□ -1.77
RETP07949 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
RETP07949 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.02□□□□□ -1.77
RETP07949 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.02□□□□□ -1.77
RETP07949 AC017083.1-201ENST00000428093 483 ntBASIC4.02□□□□□ -1.77
RETP07949 RPL7P4-203ENST00000430239 730 ntBASIC4.02□□□□□ -1.77
RETP07949 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.02□□□□□ -1.77
RETP07949 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.02□□□□□ -1.77
RETP07949 RPS4XP4-201ENST00000443195 763 ntBASIC4.02□□□□□ -1.77
RETP07949 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.02□□□□□ -1.77
RETP07949 AC098799.1-201ENST00000504752 800 ntBASIC4.02□□□□□ -1.77
RETP07949 WBP1LP4-201ENST00000505043 344 ntBASIC4.02□□□□□ -1.77
RETP07949 HMGN1P11-201ENST00000508668 303 ntBASIC4.02□□□□□ -1.77
RETP07949 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.02□□□□□ -1.77
RETP07949 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.02□□□□□ -1.77
RETP07949 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.02□□□□□ -1.77
RETP07949 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.02□□□□□ -1.77
RETP07949 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.02□□□□□ -1.77
RETP07949 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.02□□□□□ -1.77
RETP07949 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.02□□□□□ -1.77
RETP07949 AC110743.1-201ENST00000584870 478 ntBASIC4.02□□□□□ -1.77
RETP07949 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.02□□□□□ -1.77
RETP07949 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.02□□□□□ -1.77
RETP07949 AC005000.2-201ENST00000605468 310 ntBASIC4.02□□□□□ -1.77
RETP07949 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.02□□□□□ -1.77
RETP07949 MIR7975-201ENST00000619350 68 ntBASIC4.02□□□□□ -1.77
RETP07949 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.02□□□□□ -1.77
RETP07949 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
RETP07949 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RETP07949 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
RETP07949 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RETP07949 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
RETP07949 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RETP07949 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RETP07949 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
RETP07949 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
RETP07949 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
RETP07949 AC007342.7-201ENST00000624610 2337 ntBASIC4.01□□□□□ -1.77
RETP07949 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
RETP07949 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
RETP07949 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.01□□□□□ -1.77
RETP07949 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.01□□□□□ -1.77
RETP07949 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.01□□□□□ -1.77
RETP07949 AC093084.1-201ENST00000424233 687 ntBASIC4.01□□□□□ -1.77
RETP07949 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.01□□□□□ -1.77
RETP07949 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.01□□□□□ -1.77
RETP07949 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.01□□□□□ -1.77
RETP07949 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.01□□□□□ -1.77
RETP07949 RPL31P53-201ENST00000457065 348 ntBASIC4.01□□□□□ -1.77
RETP07949 LARP7P4-201ENST00000481075 878 ntBASIC4.01□□□□□ -1.77
RETP07949 RN7SL293P-201ENST00000481765 281 ntBASIC4.01□□□□□ -1.77
RETP07949 RPS3AP6-201ENST00000484430 795 ntBASIC4.01□□□□□ -1.77
RETP07949 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.01□□□□□ -1.77
RETP07949 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC4.01□□□□□ -1.77
RETP07949 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.01□□□□□ -1.77
RETP07949 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.01□□□□□ -1.77
RETP07949 EIF1AXP2-201ENST00000555940 413 ntBASIC4.01□□□□□ -1.77
RETP07949 AL049874.4-201ENST00000557593 255 ntBASIC4.01□□□□□ -1.77
RETP07949 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
RETP07949 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.01□□□□□ -1.77
RETP07949 MIR5684-201ENST00000585074 65 ntBASIC4.01□□□□□ -1.77
RETP07949 SNX6P1-201ENST00000601728 1224 ntBASIC4.01□□□□□ -1.77
RETP07949 AC007620.3-201ENST00000608131 497 ntBASIC4.01□□□□□ -1.77
RETP07949 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
RETP07949 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
RETP07949 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.01□□□□□ -1.77
RETP07949 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
RETP07949 ZNF962P-201ENST00000443465 3140 ntBASIC4.01□□□□□ -1.77
RETP07949 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.01□□□□□ -1.77
RETP07949 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.01□□□□□ -1.77
RETP07949 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
RETP07949 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
RETP07949 CASC19-284ENST00000642142 1868 ntBASIC4.01□□□□□ -1.77
RETP07949 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4□□□□□ -1.77
RETP07949 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4□□□□□ -1.77
RETP07949 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
RETP07949 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4□□□□□ -1.77
RETP07949 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
RETP07949 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4□□□□□ -1.77
RETP07949 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4□□□□□ -1.77
RETP07949 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4□□□□□ -1.77
RETP07949 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4□□□□□ -1.77
RETP07949 RNU6-304P-201ENST00000364855 107 ntBASIC4□□□□□ -1.77
RETP07949 RNVU1-14-201ENST00000384770 164 ntBASIC4□□□□□ -1.77
RETP07949 SNORA3C-201ENST00000408792 125 ntBASIC4□□□□□ -1.77
RETP07949 MTND2P11-201ENST00000423638 648 ntBASIC4□□□□□ -1.77
RETP07949 TBCAP1-201ENST00000436520 327 ntBASIC4□□□□□ -1.77
RETP07949 HSPD1P21-201ENST00000436541 245 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms