Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 RFX3-203ENST00000381984 364 ntTSL 3 BASIC4.12□□□□□ -1.75
TPM3P06753 AP002088.1-201ENST00000382740 395 ntBASIC4.12□□□□□ -1.75
TPM3P06753 RNU4-6P-201ENST00000410804 122 ntBASIC4.12□□□□□ -1.75
TPM3P06753 RPS7P13-201ENST00000413955 498 ntBASIC4.12□□□□□ -1.75
TPM3P06753 RBMY2KP-201ENST00000418221 992 ntBASIC4.12□□□□□ -1.75
TPM3P06753 AC007394.1-201ENST00000421941 531 ntBASIC4.12□□□□□ -1.75
TPM3P06753 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TPM3P06753 HSD52-202ENST00000436225 772 ntTSL 3 BASIC4.12□□□□□ -1.75
TPM3P06753 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC4.12□□□□□ -1.75
TPM3P06753 AC074367.1-201ENST00000438685 1125 ntBASIC4.12□□□□□ -1.75
TPM3P06753 MTCYBP14-201ENST00000457471 715 ntBASIC4.12□□□□□ -1.75
TPM3P06753 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.12□□□□□ -1.75
TPM3P06753 AC078817.1-201ENST00000492623 435 ntBASIC4.12□□□□□ -1.75
TPM3P06753 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TPM3P06753 AC023141.12-201ENST00000512399 199 ntBASIC4.12□□□□□ -1.75
TPM3P06753 RNU4ATAC15P-201ENST00000516415 126 ntBASIC4.12□□□□□ -1.75
TPM3P06753 RN7SKP289-201ENST00000517244 295 ntBASIC4.12□□□□□ -1.75
TPM3P06753 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.12□□□□□ -1.75
TPM3P06753 AP004242.1-201ENST00000533701 349 ntBASIC4.12□□□□□ -1.75
TPM3P06753 RN7SL600P-201ENST00000581811 299 ntBASIC4.12□□□□□ -1.75
TPM3P06753 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.12□□□□□ -1.75
TPM3P06753 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TPM3P06753 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TPM3P06753 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TPM3P06753 AC073073.2-201ENST00000609827 2578 ntBASIC4.12□□□□□ -1.75
TPM3P06753 DCAF13P1-201ENST00000495256 1330 ntBASIC4.12□□□□□ -1.75
TPM3P06753 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.12□□□□□ -1.75
TPM3P06753 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TPM3P06753 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TPM3P06753 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
TPM3P06753 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TPM3P06753 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.11□□□□□ -1.75
TPM3P06753 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
TPM3P06753 HSPE1P26-201ENST00000405341 275 ntBASIC4.11□□□□□ -1.75
TPM3P06753 RNA5SP31-201ENST00000411144 127 ntBASIC4.11□□□□□ -1.75
TPM3P06753 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.11□□□□□ -1.75
TPM3P06753 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC4.11□□□□□ -1.75
TPM3P06753 AC009480.2-201ENST00000422916 432 ntBASIC4.11□□□□□ -1.75
TPM3P06753 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.11□□□□□ -1.75
TPM3P06753 AL390879.2-203ENST00000426943 1121 ntBASIC4.11□□□□□ -1.75
TPM3P06753 NDUFB1P1-201ENST00000435191 180 ntBASIC4.11□□□□□ -1.75
TPM3P06753 TBCAP1-201ENST00000436520 327 ntBASIC4.11□□□□□ -1.75
TPM3P06753 SETD6P1-201ENST00000444575 317 ntBASIC4.11□□□□□ -1.75
TPM3P06753 EIF2S2P2-201ENST00000447161 982 ntBASIC4.11□□□□□ -1.75
TPM3P06753 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.11□□□□□ -1.75
TPM3P06753 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.11□□□□□ -1.75
TPM3P06753 RPL23AP44-201ENST00000482216 473 ntBASIC4.11□□□□□ -1.75
TPM3P06753 RNU4ATAC3P-201ENST00000516699 126 ntBASIC4.11□□□□□ -1.75
TPM3P06753 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC4.11□□□□□ -1.75
TPM3P06753 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.11□□□□□ -1.75
TPM3P06753 AC004024.1-201ENST00000549244 247 ntBASIC4.11□□□□□ -1.75
TPM3P06753 AC137768.1-201ENST00000549998 553 ntBASIC4.11□□□□□ -1.75
TPM3P06753 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.11□□□□□ -1.75
TPM3P06753 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.11□□□□□ -1.75
TPM3P06753 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.11□□□□□ -1.75
TPM3P06753 MIR5096-201ENST00000583713 70 ntBASIC4.11□□□□□ -1.75
TPM3P06753 AC067852.4-201ENST00000590314 478 ntBASIC4.11□□□□□ -1.75
TPM3P06753 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.11□□□□□ -1.75
TPM3P06753 AC110801.1-201ENST00000623590 212 ntBASIC4.11□□□□□ -1.75
TPM3P06753 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TPM3P06753 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC4.11□□□□□ -1.75
TPM3P06753 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TPM3P06753 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.11□□□□□ -1.75
TPM3P06753 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC4.11□□□□□ -1.75
TPM3P06753 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TPM3P06753 AL513302.2-201ENST00000562313 1842 ntBASIC4.1□□□□□ -1.75
TPM3P06753 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TPM3P06753 RAD1P1-201ENST00000231383 813 ntBASIC4.1□□□□□ -1.75
TPM3P06753 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TPM3P06753 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TPM3P06753 RNA5SP293-201ENST00000410527 113 ntBASIC4.1□□□□□ -1.75
TPM3P06753 PRELID3BP11-201ENST00000414230 479 ntBASIC4.1□□□□□ -1.75
TPM3P06753 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TPM3P06753 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC4.1□□□□□ -1.75
TPM3P06753 AL356276.2-201ENST00000435919 558 ntBASIC4.1□□□□□ -1.75
TPM3P06753 Z74696.2-201ENST00000436514 498 ntBASIC4.1□□□□□ -1.75
TPM3P06753 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.1□□□□□ -1.75
TPM3P06753 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.1□□□□□ -1.75
TPM3P06753 CYCSP53-201ENST00000455540 265 ntBASIC4.1□□□□□ -1.75
TPM3P06753 RPS20P32-201ENST00000456044 356 ntBASIC4.1□□□□□ -1.75
TPM3P06753 RPL5P23-201ENST00000496040 868 ntBASIC4.1□□□□□ -1.75
TPM3P06753 AC006518.1-201ENST00000541449 943 ntBASIC4.1□□□□□ -1.75
TPM3P06753 AC008011.1-201ENST00000545989 227 ntBASIC4.1□□□□□ -1.75
TPM3P06753 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.1□□□□□ -1.75
TPM3P06753 MIR4277-201ENST00000578298 84 ntBASIC4.1□□□□□ -1.75
TPM3P06753 AC011477.5-201ENST00000586571 259 ntBASIC4.1□□□□□ -1.75
TPM3P06753 ARF4P1-201ENST00000605447 541 ntBASIC4.1□□□□□ -1.75
TPM3P06753 AC024940.4-201ENST00000605507 246 ntBASIC4.1□□□□□ -1.75
TPM3P06753 SNORA62.6-201ENST00000606322 83 ntBASIC4.1□□□□□ -1.75
TPM3P06753 AC099778.2-201ENST00000610904 211 ntBASIC4.1□□□□□ -1.75
TPM3P06753 AC018816.2-201ENST00000621460 353 ntBASIC4.1□□□□□ -1.75
TPM3P06753 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
TPM3P06753 AC021755.1-201ENST00000559747 1447 ntBASIC4.1□□□□□ -1.75
TPM3P06753 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
TPM3P06753 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
TPM3P06753 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
TPM3P06753 RNA5SP130-201ENST00000364431 114 ntBASIC4.09□□□□□ -1.75
TPM3P06753 U3.22-201ENST00000391120 215 ntBASIC4.09□□□□□ -1.75
TPM3P06753 CYB5AP4-201ENST00000396692 399 ntBASIC4.09□□□□□ -1.75
TPM3P06753 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 167.6 ms