Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LDLRP01130 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LDLRP01130 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LDLRP01130 AL592437.2-201ENST00000421655 2434 ntBASIC4.37□□□□□ -1.71
LDLRP01130 AC006042.3-201ENST00000454684 1469 ntBASIC4.37□□□□□ -1.71
LDLRP01130 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LDLRP01130 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.37□□□□□ -1.71
LDLRP01130 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LDLRP01130 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.37□□□□□ -1.71
LDLRP01130 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LDLRP01130 Z73965.1-201ENST00000623412 2297 ntBASIC4.37□□□□□ -1.71
LDLRP01130 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.37□□□□□ -1.71
LDLRP01130 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LDLRP01130 OR10J6P-201ENST00000289731 930 ntBASIC4.37□□□□□ -1.71
LDLRP01130 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
LDLRP01130 SNORA37-201ENST00000384504 129 ntBASIC4.37□□□□□ -1.71
LDLRP01130 AL590762.2-201ENST00000395798 571 ntBASIC4.37□□□□□ -1.71
LDLRP01130 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC4.37□□□□□ -1.71
LDLRP01130 RSU1P3-201ENST00000412878 835 ntBASIC4.37□□□□□ -1.71
LDLRP01130 MTND4P3-201ENST00000417829 541 ntBASIC4.37□□□□□ -1.71
LDLRP01130 AC114814.2-201ENST00000419195 485 ntBASIC4.37□□□□□ -1.71
LDLRP01130 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.37□□□□□ -1.71
LDLRP01130 OR2B7P-201ENST00000429302 934 ntBASIC4.37□□□□□ -1.71
LDLRP01130 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.37□□□□□ -1.71
LDLRP01130 AC016831.4-201ENST00000438302 307 ntBASIC4.37□□□□□ -1.71
LDLRP01130 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC4.37□□□□□ -1.71
LDLRP01130 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.37□□□□□ -1.71
LDLRP01130 PTGES3P1-201ENST00000439531 483 ntBASIC4.37□□□□□ -1.71
LDLRP01130 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.37□□□□□ -1.71
LDLRP01130 AC009263.1-201ENST00000441193 1239 ntBASIC4.37□□□□□ -1.71
LDLRP01130 AL929288.2-201ENST00000446368 407 ntBASIC4.37□□□□□ -1.71
LDLRP01130 RPS27AP15-201ENST00000447672 466 ntBASIC4.37□□□□□ -1.71
LDLRP01130 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.37□□□□□ -1.71
LDLRP01130 AL445669.2-201ENST00000454425 421 ntBASIC4.37□□□□□ -1.71
LDLRP01130 RNU6-1218P-201ENST00000458990 108 ntBASIC4.37□□□□□ -1.71
LDLRP01130 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.37□□□□□ -1.71
LDLRP01130 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.37□□□□□ -1.71
LDLRP01130 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC4.37□□□□□ -1.71
LDLRP01130 AC090013.1-201ENST00000485147 480 ntBASIC4.37□□□□□ -1.71
LDLRP01130 AC113420.1-201ENST00000507903 571 ntBASIC4.37□□□□□ -1.71
LDLRP01130 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.37□□□□□ -1.71
LDLRP01130 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.37□□□□□ -1.71
LDLRP01130 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC4.37□□□□□ -1.71
LDLRP01130 AC119751.1-201ENST00000513357 765 ntBASIC4.37□□□□□ -1.71
LDLRP01130 SMARCE1P4-201ENST00000523647 241 ntBASIC4.37□□□□□ -1.71
LDLRP01130 MTATP6P15-201ENST00000527233 835 ntBASIC4.37□□□□□ -1.71
LDLRP01130 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LDLRP01130 AL132857.1-201ENST00000555180 708 ntBASIC4.37□□□□□ -1.71
LDLRP01130 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.37□□□□□ -1.71
LDLRP01130 AC084757.1-201ENST00000559987 490 ntBASIC4.37□□□□□ -1.71
LDLRP01130 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.37□□□□□ -1.71
LDLRP01130 AC093227.2-201ENST00000589357 285 ntBASIC4.37□□□□□ -1.71
LDLRP01130 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.37□□□□□ -1.71
LDLRP01130 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.37□□□□□ -1.71
LDLRP01130 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.37□□□□□ -1.71
LDLRP01130 AC015813.4-201ENST00000610469 179 ntBASIC4.37□□□□□ -1.71
LDLRP01130 AC024941.1-201ENST00000612250 334 ntBASIC4.37□□□□□ -1.71
LDLRP01130 VN1R74P-201ENST00000613259 503 ntBASIC4.37□□□□□ -1.71
LDLRP01130 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.37□□□□□ -1.71
LDLRP01130 AP002791.1-201ENST00000623291 381 ntBASIC4.37□□□□□ -1.71
LDLRP01130 AC116563.2-201ENST00000624751 535 ntBASIC4.37□□□□□ -1.71
LDLRP01130 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LDLRP01130 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LDLRP01130 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LDLRP01130 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LDLRP01130 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LDLRP01130 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.37□□□□□ -1.71
LDLRP01130 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
LDLRP01130 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.36□□□□□ -1.71
LDLRP01130 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LDLRP01130 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
LDLRP01130 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.36□□□□□ -1.71
LDLRP01130 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
LDLRP01130 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LDLRP01130 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
LDLRP01130 AL592148.3-201ENST00000608771 2646 ntBASIC4.36□□□□□ -1.71
LDLRP01130 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC4.36□□□□□ -1.71
LDLRP01130 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.36□□□□□ -1.71
LDLRP01130 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LDLRP01130 RNA5SP52-201ENST00000362448 134 ntBASIC4.36□□□□□ -1.71
LDLRP01130 RNU6-236P-201ENST00000363886 106 ntBASIC4.36□□□□□ -1.71
LDLRP01130 RNA5SP22-201ENST00000365393 109 ntBASIC4.36□□□□□ -1.71
LDLRP01130 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC4.36□□□□□ -1.71
LDLRP01130 RNY3P9-201ENST00000384727 106 ntBASIC4.36□□□□□ -1.71
LDLRP01130 MIR134-201ENST00000385258 73 ntBASIC4.36□□□□□ -1.71
LDLRP01130 RPS24P12-201ENST00000402084 394 ntBASIC4.36□□□□□ -1.71
LDLRP01130 LAP3P1-201ENST00000403648 294 ntBASIC4.36□□□□□ -1.71
LDLRP01130 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.36□□□□□ -1.71
LDLRP01130 AC005005.2-201ENST00000420779 380 ntBASIC4.36□□□□□ -1.71
LDLRP01130 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.36□□□□□ -1.71
LDLRP01130 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LDLRP01130 NANOGP5-201ENST00000424456 877 ntBASIC4.36□□□□□ -1.71
LDLRP01130 SKP1P3-201ENST00000429280 487 ntBASIC4.36□□□□□ -1.71
LDLRP01130 RPS27AP12-201ENST00000429552 465 ntBASIC4.36□□□□□ -1.71
LDLRP01130 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LDLRP01130 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC4.36□□□□□ -1.71
LDLRP01130 GTF2IP3-201ENST00000433887 494 ntBASIC4.36□□□□□ -1.71
LDLRP01130 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.36□□□□□ -1.71
LDLRP01130 MTCYBP31-201ENST00000438855 1122 ntBASIC4.36□□□□□ -1.71
LDLRP01130 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms