Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC005000.2-201ENST00000605468 310 ntBASIC4.25□□□□□ -1.73
PDGFBP01127 AC023509.5-201ENST00000617434 807 ntBASIC4.25□□□□□ -1.73
PDGFBP01127 MIR7151-201ENST00000617477 60 ntBASIC4.25□□□□□ -1.73
PDGFBP01127 MIR6864-201ENST00000617935 70 ntBASIC4.25□□□□□ -1.73
PDGFBP01127 U6.105-201ENST00000637379 88 ntBASIC4.25□□□□□ -1.73
PDGFBP01127 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PDGFBP01127 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.25□□□□□ -1.73
PDGFBP01127 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
PDGFBP01127 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
PDGFBP01127 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
PDGFBP01127 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
PDGFBP01127 AC126323.6-202ENST00000568092 3511 ntBASIC4.24□□□□□ -1.73
PDGFBP01127 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
PDGFBP01127 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.24□□□□□ -1.73
PDGFBP01127 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.24□□□□□ -1.73
PDGFBP01127 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PDGFBP01127 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PDGFBP01127 U3.15-201ENST00000365398 212 ntBASIC4.24□□□□□ -1.73
PDGFBP01127 RNVU1-14-201ENST00000384770 164 ntBASIC4.24□□□□□ -1.73
PDGFBP01127 MIR708-201ENST00000390708 88 ntBASIC4.24□□□□□ -1.73
PDGFBP01127 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
PDGFBP01127 SYF2P2-201ENST00000417620 583 ntBASIC4.24□□□□□ -1.73
PDGFBP01127 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.24□□□□□ -1.73
PDGFBP01127 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.24□□□□□ -1.73
PDGFBP01127 PNRC2P1-201ENST00000423940 420 ntBASIC4.24□□□□□ -1.73
PDGFBP01127 AC008065.1-201ENST00000428525 348 ntBASIC4.24□□□□□ -1.73
PDGFBP01127 RPL7P4-203ENST00000430239 730 ntBASIC4.24□□□□□ -1.73
PDGFBP01127 RHEBP2-201ENST00000450289 600 ntBASIC4.24□□□□□ -1.73
PDGFBP01127 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.24□□□□□ -1.73
PDGFBP01127 AC022795.1-201ENST00000473808 480 ntBASIC4.24□□□□□ -1.73
PDGFBP01127 AC104164.2-201ENST00000496953 495 ntBASIC4.24□□□□□ -1.73
PDGFBP01127 AL035404.1-201ENST00000497982 568 ntBASIC4.24□□□□□ -1.73
PDGFBP01127 CAB39P1-201ENST00000502277 460 ntBASIC4.24□□□□□ -1.73
PDGFBP01127 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PDGFBP01127 AC005351.1-201ENST00000511152 786 ntBASIC4.24□□□□□ -1.73
PDGFBP01127 RN7SKP283-201ENST00000517197 270 ntBASIC4.24□□□□□ -1.73
PDGFBP01127 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.24□□□□□ -1.73
PDGFBP01127 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
PDGFBP01127 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.24□□□□□ -1.73
PDGFBP01127 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
PDGFBP01127 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.24□□□□□ -1.73
PDGFBP01127 AP001180.3-201ENST00000582221 145 ntBASIC4.24□□□□□ -1.73
PDGFBP01127 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.24□□□□□ -1.73
PDGFBP01127 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.24□□□□□ -1.73
PDGFBP01127 AC022146.1-201ENST00000595307 847 ntBASIC4.24□□□□□ -1.73
PDGFBP01127 ZNF92P2-201ENST00000600543 1059 ntBASIC4.24□□□□□ -1.73
PDGFBP01127 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.24□□□□□ -1.73
PDGFBP01127 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.24□□□□□ -1.73
PDGFBP01127 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.24□□□□□ -1.73
PDGFBP01127 STMN1P1-201ENST00000617809 440 ntBASIC4.24□□□□□ -1.73
PDGFBP01127 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC4.24□□□□□ -1.73
PDGFBP01127 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
PDGFBP01127 AL596275.2-204ENST00000641628 552 ntBASIC4.24□□□□□ -1.73
PDGFBP01127 AL596275.2-206ENST00000641957 626 ntBASIC4.24□□□□□ -1.73
PDGFBP01127 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.24□□□□□ -1.73
PDGFBP01127 ERCC6-202ENST00000374127 1782 ntBASIC4.24□□□□□ -1.73
PDGFBP01127 AC046144.1-201ENST00000478559 1853 ntBASIC4.24□□□□□ -1.73
PDGFBP01127 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.23□□□□□ -1.73
PDGFBP01127 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PDGFBP01127 MTCO1P18-201ENST00000455518 1419 ntBASIC4.23□□□□□ -1.73
PDGFBP01127 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.23□□□□□ -1.73
PDGFBP01127 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.23□□□□□ -1.73
PDGFBP01127 MTCO1P12-201ENST00000414273 1543 ntBASIC4.23□□□□□ -1.73
PDGFBP01127 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PDGFBP01127 HSPE1P12-201ENST00000412576 301 ntBASIC4.23□□□□□ -1.73
PDGFBP01127 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.23□□□□□ -1.73
PDGFBP01127 BOLA3P4-201ENST00000418151 400 ntBASIC4.23□□□□□ -1.73
PDGFBP01127 CKS1BP6-201ENST00000424932 240 ntBASIC4.23□□□□□ -1.73
PDGFBP01127 MORF4L1P7-201ENST00000426038 703 ntBASIC4.23□□□□□ -1.73
PDGFBP01127 OR5AW1P-201ENST00000426334 1006 ntBASIC4.23□□□□□ -1.73
PDGFBP01127 AC074367.1-201ENST00000438685 1125 ntBASIC4.23□□□□□ -1.73
PDGFBP01127 AL591473.1-201ENST00000464297 313 ntBASIC4.23□□□□□ -1.73
PDGFBP01127 SETP6-201ENST00000479329 568 ntBASIC4.23□□□□□ -1.73
PDGFBP01127 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.23□□□□□ -1.73
PDGFBP01127 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.23□□□□□ -1.73
PDGFBP01127 RN7SKP46-201ENST00000515942 234 ntBASIC4.23□□□□□ -1.73
PDGFBP01127 IGKV2D-19-201ENST00000523346 262 ntBASIC4.23□□□□□ -1.73
PDGFBP01127 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC4.23□□□□□ -1.73
PDGFBP01127 OR8I1P-201ENST00000529291 931 ntBASIC4.23□□□□□ -1.73
PDGFBP01127 PTP4A1P6-201ENST00000531034 478 ntBASIC4.23□□□□□ -1.73
PDGFBP01127 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.23□□□□□ -1.73
PDGFBP01127 AC027104.1-201ENST00000563702 681 ntBASIC4.23□□□□□ -1.73
PDGFBP01127 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.23□□□□□ -1.73
PDGFBP01127 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC4.23□□□□□ -1.73
PDGFBP01127 AC090079.2-201ENST00000575289 768 ntBASIC4.23□□□□□ -1.73
PDGFBP01127 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.23□□□□□ -1.73
PDGFBP01127 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.23□□□□□ -1.73
PDGFBP01127 AC125494.3-201ENST00000602759 455 ntBASIC4.23□□□□□ -1.73
PDGFBP01127 AP003117.2-201ENST00000606010 545 ntBASIC4.23□□□□□ -1.73
PDGFBP01127 AC105429.2-201ENST00000610567 517 ntBASIC4.23□□□□□ -1.73
PDGFBP01127 AC022106.2-201ENST00000620114 757 ntBASIC4.23□□□□□ -1.73
PDGFBP01127 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC4.23□□□□□ -1.73
PDGFBP01127 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.23□□□□□ -1.73
PDGFBP01127 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.23□□□□□ -1.73
PDGFBP01127 CASC19-206ENST00000641028 1430 ntBASIC4.22□□□□□ -1.73
PDGFBP01127 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
PDGFBP01127 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PDGFBP01127 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
PDGFBP01127 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PDGFBP01127 RNA5SP72-201ENST00000364442 117 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms