Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 AC133473.1-201ENST00000455173 299 ntBASIC4.03□□□□□ -1.76
CTDNEP1O95476 AC023598.1-201ENST00000472521 361 ntBASIC4.03□□□□□ -1.76
CTDNEP1O95476 AC021205.2-201ENST00000480069 347 ntBASIC4.03□□□□□ -1.76
CTDNEP1O95476 AL133372.1-201ENST00000493565 745 ntBASIC4.03□□□□□ -1.76
CTDNEP1O95476 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CTDNEP1O95476 AC020893.1-201ENST00000502452 580 ntBASIC4.03□□□□□ -1.76
CTDNEP1O95476 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC4.03□□□□□ -1.76
CTDNEP1O95476 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.03□□□□□ -1.76
CTDNEP1O95476 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC4.03□□□□□ -1.76
CTDNEP1O95476 HMGN1P11-201ENST00000508668 303 ntBASIC4.03□□□□□ -1.76
CTDNEP1O95476 AC110768.1-201ENST00000509222 400 ntBASIC4.03□□□□□ -1.76
CTDNEP1O95476 RN7SKP18-201ENST00000516005 275 ntBASIC4.03□□□□□ -1.76
CTDNEP1O95476 Z82195.1-201ENST00000604558 398 ntBASIC4.03□□□□□ -1.76
CTDNEP1O95476 RNVU1-4-201ENST00000612985 164 ntBASIC4.03□□□□□ -1.76
CTDNEP1O95476 AC067852.7-201ENST00000623270 535 ntBASIC4.03□□□□□ -1.76
CTDNEP1O95476 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.03□□□□□ -1.76
CTDNEP1O95476 MIR6715B-201ENST00000637172 77 ntBASIC4.03□□□□□ -1.76
CTDNEP1O95476 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CTDNEP1O95476 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CTDNEP1O95476 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.03□□□□□ -1.76
CTDNEP1O95476 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.03□□□□□ -1.76
CTDNEP1O95476 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.03□□□□□ -1.76
CTDNEP1O95476 PHKBP1-201ENST00000450951 1951 ntBASIC4.03□□□□□ -1.76
CTDNEP1O95476 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CTDNEP1O95476 AL513302.2-201ENST00000562313 1842 ntBASIC4.02□□□□□ -1.77
CTDNEP1O95476 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CTDNEP1O95476 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CTDNEP1O95476 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
CTDNEP1O95476 MIR184-201ENST00000384962 84 ntBASIC4.02□□□□□ -1.77
CTDNEP1O95476 SNORD17-201ENST00000390930 237 ntBASIC4.02□□□□□ -1.77
CTDNEP1O95476 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.02□□□□□ -1.77
CTDNEP1O95476 AC025750.1-201ENST00000399891 379 ntBASIC4.02□□□□□ -1.77
CTDNEP1O95476 AL138878.1-201ENST00000405131 347 ntBASIC4.02□□□□□ -1.77
CTDNEP1O95476 RPL23AP48-201ENST00000406913 488 ntBASIC4.02□□□□□ -1.77
CTDNEP1O95476 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.02□□□□□ -1.77
CTDNEP1O95476 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC4.02□□□□□ -1.77
CTDNEP1O95476 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.02□□□□□ -1.77
CTDNEP1O95476 AC007389.2-201ENST00000434630 306 ntBASIC4.02□□□□□ -1.77
CTDNEP1O95476 RPL7P28-201ENST00000437739 740 ntBASIC4.02□□□□□ -1.77
CTDNEP1O95476 ELOCP3-201ENST00000439303 348 ntBASIC4.02□□□□□ -1.77
CTDNEP1O95476 SNORD105B-201ENST00000458770 79 ntBASIC4.02□□□□□ -1.77
CTDNEP1O95476 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC4.02□□□□□ -1.77
CTDNEP1O95476 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.02□□□□□ -1.77
CTDNEP1O95476 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.02□□□□□ -1.77
CTDNEP1O95476 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.02□□□□□ -1.77
CTDNEP1O95476 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.02□□□□□ -1.77
CTDNEP1O95476 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.02□□□□□ -1.77
CTDNEP1O95476 AC011602.1-201ENST00000546484 331 ntBASIC4.02□□□□□ -1.77
CTDNEP1O95476 TGIF1P1-201ENST00000558095 802 ntBASIC4.02□□□□□ -1.77
CTDNEP1O95476 BNIP3P5-201ENST00000562290 498 ntBASIC4.02□□□□□ -1.77
CTDNEP1O95476 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.02□□□□□ -1.77
CTDNEP1O95476 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.02□□□□□ -1.77
CTDNEP1O95476 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CTDNEP1O95476 AL365503.1-201ENST00000605247 905 ntBASIC4.02□□□□□ -1.77
CTDNEP1O95476 AL109618.2-201ENST00000605527 211 ntBASIC4.02□□□□□ -1.77
CTDNEP1O95476 AC239803.2-201ENST00000610161 430 ntBASIC4.02□□□□□ -1.77
CTDNEP1O95476 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.02□□□□□ -1.77
CTDNEP1O95476 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC4.02□□□□□ -1.77
CTDNEP1O95476 U7.8-201ENST00000619968 63 ntBASIC4.02□□□□□ -1.77
CTDNEP1O95476 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.02□□□□□ -1.77
CTDNEP1O95476 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CTDNEP1O95476 NMD3P1-201ENST00000439704 1488 ntBASIC4.02□□□□□ -1.77
CTDNEP1O95476 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CTDNEP1O95476 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CTDNEP1O95476 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
CTDNEP1O95476 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
CTDNEP1O95476 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CTDNEP1O95476 AL365440.1-201ENST00000436135 2167 ntBASIC4.02□□□□□ -1.77
CTDNEP1O95476 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
CTDNEP1O95476 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
CTDNEP1O95476 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
CTDNEP1O95476 AC032011.1-201ENST00000611703 1549 ntBASIC4.01□□□□□ -1.77
CTDNEP1O95476 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CTDNEP1O95476 AL645937.1-201ENST00000641739 1652 ntBASIC4.01□□□□□ -1.77
CTDNEP1O95476 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CTDNEP1O95476 RNA5SP502-201ENST00000362694 119 ntBASIC4.01□□□□□ -1.77
CTDNEP1O95476 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CTDNEP1O95476 MIR134-201ENST00000385258 73 ntBASIC4.01□□□□□ -1.77
CTDNEP1O95476 RNA5SP105-201ENST00000391123 113 ntBASIC4.01□□□□□ -1.77
CTDNEP1O95476 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC4.01□□□□□ -1.77
CTDNEP1O95476 RN7SKP202-201ENST00000410439 330 ntBASIC4.01□□□□□ -1.77
CTDNEP1O95476 AMD1P2-201ENST00000412936 992 ntBASIC4.01□□□□□ -1.77
CTDNEP1O95476 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.01□□□□□ -1.77
CTDNEP1O95476 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.01□□□□□ -1.77
CTDNEP1O95476 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.01□□□□□ -1.77
CTDNEP1O95476 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC4.01□□□□□ -1.77
CTDNEP1O95476 RPL12P26-201ENST00000452430 487 ntBASIC4.01□□□□□ -1.77
CTDNEP1O95476 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.01□□□□□ -1.77
CTDNEP1O95476 AC025518.1-201ENST00000479856 347 ntBASIC4.01□□□□□ -1.77
CTDNEP1O95476 PRELID3BP7-201ENST00000503606 469 ntBASIC4.01□□□□□ -1.77
CTDNEP1O95476 AC113398.2-201ENST00000507630 558 ntBASIC4.01□□□□□ -1.77
CTDNEP1O95476 ARL2BPP6-201ENST00000512757 439 ntBASIC4.01□□□□□ -1.77
CTDNEP1O95476 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.01□□□□□ -1.77
CTDNEP1O95476 HMGN1P15-201ENST00000513870 295 ntBASIC4.01□□□□□ -1.77
CTDNEP1O95476 RNU1-45P-201ENST00000517191 141 ntBASIC4.01□□□□□ -1.77
CTDNEP1O95476 AC008676.3-201ENST00000521237 435 ntBASIC4.01□□□□□ -1.77
CTDNEP1O95476 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.01□□□□□ -1.77
CTDNEP1O95476 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.01□□□□□ -1.77
CTDNEP1O95476 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
CTDNEP1O95476 CR392039.5-201ENST00000623201 510 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms