Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 SFR1P1-201ENST00000403720 688 ntBASIC4.07□□□□□ -1.76
SNX3O60493 ZNF602P-201ENST00000405929 924 ntBASIC4.07□□□□□ -1.76
SNX3O60493 MTCO2P8-201ENST00000412213 658 ntBASIC4.07□□□□□ -1.76
SNX3O60493 AP000534.2-201ENST00000412729 568 ntBASIC4.07□□□□□ -1.76
SNX3O60493 AC004022.2-201ENST00000413824 193 ntBASIC4.07□□□□□ -1.76
SNX3O60493 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.07□□□□□ -1.76
SNX3O60493 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.07□□□□□ -1.76
SNX3O60493 AL138785.1-201ENST00000425821 331 ntBASIC4.07□□□□□ -1.76
SNX3O60493 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC4.07□□□□□ -1.76
SNX3O60493 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.07□□□□□ -1.76
SNX3O60493 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.07□□□□□ -1.76
SNX3O60493 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.07□□□□□ -1.76
SNX3O60493 KCTD9P3-201ENST00000434597 1169 ntBASIC4.07□□□□□ -1.76
SNX3O60493 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.07□□□□□ -1.76
SNX3O60493 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.07□□□□□ -1.76
SNX3O60493 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC4.07□□□□□ -1.76
SNX3O60493 MTCYBP42-201ENST00000444653 1130 ntBASIC4.07□□□□□ -1.76
SNX3O60493 AL358794.1-201ENST00000445689 381 ntBASIC4.07□□□□□ -1.76
SNX3O60493 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.07□□□□□ -1.76
SNX3O60493 AC073850.1-201ENST00000449243 255 ntBASIC4.07□□□□□ -1.76
SNX3O60493 OR2AF1P-201ENST00000454899 889 ntBASIC4.07□□□□□ -1.76
SNX3O60493 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC4.07□□□□□ -1.76
SNX3O60493 AC063943.1-201ENST00000465434 453 ntBASIC4.07□□□□□ -1.76
SNX3O60493 AC010307.1-201ENST00000467206 836 ntBASIC4.07□□□□□ -1.76
SNX3O60493 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
SNX3O60493 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.07□□□□□ -1.76
SNX3O60493 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.07□□□□□ -1.76
SNX3O60493 MTATP6P22-201ENST00000507369 598 ntBASIC4.07□□□□□ -1.76
SNX3O60493 AC118282.2-201ENST00000508739 374 ntBASIC4.07□□□□□ -1.76
SNX3O60493 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.07□□□□□ -1.76
SNX3O60493 AC026726.1-201ENST00000512859 601 ntBASIC4.07□□□□□ -1.76
SNX3O60493 SNORD116-26-201ENST00000516006 96 ntBASIC4.07□□□□□ -1.76
SNX3O60493 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC4.07□□□□□ -1.76
SNX3O60493 MTCO3P15-201ENST00000526563 574 ntBASIC4.07□□□□□ -1.76
SNX3O60493 LRRC6P1-201ENST00000532188 885 ntBASIC4.07□□□□□ -1.76
SNX3O60493 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC4.07□□□□□ -1.76
SNX3O60493 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.07□□□□□ -1.76
SNX3O60493 AC009117.1-201ENST00000563948 554 ntBASIC4.07□□□□□ -1.76
SNX3O60493 AC011477.5-201ENST00000586571 259 ntBASIC4.07□□□□□ -1.76
SNX3O60493 AP001542.2-201ENST00000593141 364 ntBASIC4.07□□□□□ -1.76
SNX3O60493 AC110741.2-201ENST00000605278 268 ntBASIC4.07□□□□□ -1.76
SNX3O60493 AL583856.2-201ENST00000606298 543 ntBASIC4.07□□□□□ -1.76
SNX3O60493 AP000238.1-201ENST00000608759 426 ntBASIC4.07□□□□□ -1.76
SNX3O60493 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SNX3O60493 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
SNX3O60493 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.07□□□□□ -1.76
SNX3O60493 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SNX3O60493 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
SNX3O60493 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.06□□□□□ -1.76
SNX3O60493 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.06□□□□□ -1.76
SNX3O60493 AC006971.1-201ENST00000407916 4486 ntBASIC4.06□□□□□ -1.76
SNX3O60493 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.06□□□□□ -1.76
SNX3O60493 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
SNX3O60493 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SNX3O60493 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.06□□□□□ -1.76
SNX3O60493 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
SNX3O60493 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
SNX3O60493 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
SNX3O60493 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
SNX3O60493 RNU6-1151P-201ENST00000384684 107 ntBASIC4.06□□□□□ -1.76
SNX3O60493 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
SNX3O60493 RNA5SP397-201ENST00000391323 118 ntBASIC4.06□□□□□ -1.76
SNX3O60493 AL583835.1-201ENST00000399570 407 ntBASIC4.06□□□□□ -1.76
SNX3O60493 MTCO1P56-201ENST00000401674 224 ntBASIC4.06□□□□□ -1.76
SNX3O60493 MTCO2P31-201ENST00000402702 684 ntBASIC4.06□□□□□ -1.76
SNX3O60493 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.06□□□□□ -1.76
SNX3O60493 RNU6-584P-201ENST00000410350 95 ntBASIC4.06□□□□□ -1.76
SNX3O60493 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.06□□□□□ -1.76
SNX3O60493 CYP4F29P-201ENST00000420685 446 ntBASIC4.06□□□□□ -1.76
SNX3O60493 AC093698.1-201ENST00000423843 571 ntBASIC4.06□□□□□ -1.76
SNX3O60493 RPL30P3-201ENST00000424262 333 ntBASIC4.06□□□□□ -1.76
SNX3O60493 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.06□□□□□ -1.76
SNX3O60493 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.06□□□□□ -1.76
SNX3O60493 AC105402.2-201ENST00000438503 358 ntBASIC4.06□□□□□ -1.76
SNX3O60493 RRM2P4-201ENST00000441721 562 ntBASIC4.06□□□□□ -1.76
SNX3O60493 NPM1P13-201ENST00000452663 865 ntBASIC4.06□□□□□ -1.76
SNX3O60493 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC4.06□□□□□ -1.76
SNX3O60493 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.06□□□□□ -1.76
SNX3O60493 RPS29P19-201ENST00000479709 171 ntBASIC4.06□□□□□ -1.76
SNX3O60493 AC113420.1-201ENST00000507903 571 ntBASIC4.06□□□□□ -1.76
SNX3O60493 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC4.06□□□□□ -1.76
SNX3O60493 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.06□□□□□ -1.76
SNX3O60493 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC4.06□□□□□ -1.76
SNX3O60493 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.06□□□□□ -1.76
SNX3O60493 HIGD1AP6-201ENST00000521833 279 ntBASIC4.06□□□□□ -1.76
SNX3O60493 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.06□□□□□ -1.76
SNX3O60493 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.06□□□□□ -1.76
SNX3O60493 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC4.06□□□□□ -1.76
SNX3O60493 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.06□□□□□ -1.76
SNX3O60493 AL049838.1-201ENST00000563647 981 ntBASIC4.06□□□□□ -1.76
SNX3O60493 AL133457.1-201ENST00000564251 987 ntBASIC4.06□□□□□ -1.76
SNX3O60493 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.06□□□□□ -1.76
SNX3O60493 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.06□□□□□ -1.76
SNX3O60493 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.06□□□□□ -1.76
SNX3O60493 MIR3667-201ENST00000581025 74 ntBASIC4.06□□□□□ -1.76
SNX3O60493 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.06□□□□□ -1.76
SNX3O60493 AL133243.1-201ENST00000614487 366 ntBASIC4.06□□□□□ -1.76
SNX3O60493 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SNX3O60493 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.06□□□□□ -1.76
SNX3O60493 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 142.8 ms