Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 MTCO1P47-201ENST00000523889 1271 ntBASIC5.62□□□□□ -1.51
COL4A3BPQ9Y5P4 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC5.62□□□□□ -1.51
COL4A3BPQ9Y5P4 AC005412.1-201ENST00000580812 1049 ntBASIC5.62□□□□□ -1.51
COL4A3BPQ9Y5P4 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC5.62□□□□□ -1.51
COL4A3BPQ9Y5P4 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.62□□□□□ -1.51
COL4A3BPQ9Y5P4 VN1R92P-201ENST00000598511 928 ntBASIC5.62□□□□□ -1.51
COL4A3BPQ9Y5P4 YWHAQP7-201ENST00000603536 658 ntBASIC5.62□□□□□ -1.51
COL4A3BPQ9Y5P4 AC006363.1-201ENST00000603806 463 ntBASIC5.62□□□□□ -1.51
COL4A3BPQ9Y5P4 DUXAP11-201ENST00000603858 526 ntBASIC5.62□□□□□ -1.51
COL4A3BPQ9Y5P4 BNIP3P11-201ENST00000603878 563 ntBASIC5.62□□□□□ -1.51
COL4A3BPQ9Y5P4 Mico1.1-201ENST00000611698 204 ntBASIC5.62□□□□□ -1.51
COL4A3BPQ9Y5P4 AL049539.1-201ENST00000611964 459 ntBASIC5.62□□□□□ -1.51
COL4A3BPQ9Y5P4 BX005214.3-202ENST00000619809 325 ntBASIC5.62□□□□□ -1.51
COL4A3BPQ9Y5P4 AP006248.2-201ENST00000623309 592 ntBASIC5.62□□□□□ -1.51
COL4A3BPQ9Y5P4 AC004943.3-201ENST00000624116 600 ntBASIC5.62□□□□□ -1.51
COL4A3BPQ9Y5P4 BMS1P21-201ENST00000634565 365 ntBASIC5.62□□□□□ -1.51
COL4A3BPQ9Y5P4 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
COL4A3BPQ9Y5P4 AC073429.2-201ENST00000569694 1444 ntBASIC5.62□□□□□ -1.51
COL4A3BPQ9Y5P4 MTCO1P14-201ENST00000441695 1559 ntBASIC5.62□□□□□ -1.51
COL4A3BPQ9Y5P4 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL4A3BPQ9Y5P4 USP44-208ENST00000552440 1818 ntTSL 5 BASIC5.62□□□□□ -1.51
COL4A3BPQ9Y5P4 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.62□□□□□ -1.51
COL4A3BPQ9Y5P4 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.62□□□□□ -1.51
COL4A3BPQ9Y5P4 AL031595.2-201ENST00000624215 19071 ntBASIC5.62□□□□□ -1.51
COL4A3BPQ9Y5P4 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
COL4A3BPQ9Y5P4 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
COL4A3BPQ9Y5P4 Z95331.1-201ENST00000623075 23112 ntBASIC5.61□□□□□ -1.51
COL4A3BPQ9Y5P4 AL391994.1-201ENST00000254724 282 ntBASIC5.61□□□□□ -1.51
COL4A3BPQ9Y5P4 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
COL4A3BPQ9Y5P4 RNA5SP428-201ENST00000365129 132 ntBASIC5.61□□□□□ -1.51
COL4A3BPQ9Y5P4 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC5.61□□□□□ -1.51
COL4A3BPQ9Y5P4 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
COL4A3BPQ9Y5P4 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
COL4A3BPQ9Y5P4 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC5.61□□□□□ -1.51
COL4A3BPQ9Y5P4 AC007738.1-201ENST00000413892 348 ntBASIC5.61□□□□□ -1.51
COL4A3BPQ9Y5P4 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC5.61□□□□□ -1.51
COL4A3BPQ9Y5P4 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
COL4A3BPQ9Y5P4 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC5.61□□□□□ -1.51
COL4A3BPQ9Y5P4 CYCSP10-201ENST00000417973 294 ntBASIC5.61□□□□□ -1.51
COL4A3BPQ9Y5P4 AC104333.2-201ENST00000422630 192 ntBASIC5.61□□□□□ -1.51
COL4A3BPQ9Y5P4 AC011233.1-201ENST00000422812 283 ntBASIC5.61□□□□□ -1.51
COL4A3BPQ9Y5P4 AL593851.1-201ENST00000426171 157 ntBASIC5.61□□□□□ -1.51
COL4A3BPQ9Y5P4 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.61□□□□□ -1.51
COL4A3BPQ9Y5P4 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.61□□□□□ -1.51
COL4A3BPQ9Y5P4 BX323845.1-201ENST00000432417 179 ntBASIC5.61□□□□□ -1.51
COL4A3BPQ9Y5P4 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC5.61□□□□□ -1.51
COL4A3BPQ9Y5P4 RPL23AP74-201ENST00000437246 471 ntBASIC5.61□□□□□ -1.51
COL4A3BPQ9Y5P4 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC5.61□□□□□ -1.51
COL4A3BPQ9Y5P4 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
COL4A3BPQ9Y5P4 AL354714.3-201ENST00000447284 493 ntBASIC5.61□□□□□ -1.51
COL4A3BPQ9Y5P4 OR52J1P-201ENST00000450596 932 ntBASIC5.61□□□□□ -1.51
COL4A3BPQ9Y5P4 IGHV5-78-201ENST00000450948 295 ntBASIC5.61□□□□□ -1.51
COL4A3BPQ9Y5P4 TRGVB-201ENST00000453257 471 ntBASIC5.61□□□□□ -1.51
COL4A3BPQ9Y5P4 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC5.61□□□□□ -1.51
COL4A3BPQ9Y5P4 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
COL4A3BPQ9Y5P4 NDUFA5P9-201ENST00000472609 340 ntBASIC5.61□□□□□ -1.51
COL4A3BPQ9Y5P4 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.61□□□□□ -1.51
COL4A3BPQ9Y5P4 F11-205ENST00000492972 1204 ntTSL 2 BASIC5.61□□□□□ -1.51
COL4A3BPQ9Y5P4 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC5.61□□□□□ -1.51
COL4A3BPQ9Y5P4 AC010350.1-201ENST00000504908 231 ntBASIC5.61□□□□□ -1.51
COL4A3BPQ9Y5P4 RNA5SP216-201ENST00000516111 123 ntBASIC5.61□□□□□ -1.51
COL4A3BPQ9Y5P4 RNA5SP43-201ENST00000516559 110 ntBASIC5.61□□□□□ -1.51
COL4A3BPQ9Y5P4 RNU6-678P-201ENST00000516832 109 ntBASIC5.61□□□□□ -1.51
COL4A3BPQ9Y5P4 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.61□□□□□ -1.51
COL4A3BPQ9Y5P4 IGLVIV-53-201ENST00000520107 367 ntBASIC5.61□□□□□ -1.51
COL4A3BPQ9Y5P4 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.61□□□□□ -1.51
COL4A3BPQ9Y5P4 NAP1L1P1-201ENST00000524793 1063 ntBASIC5.61□□□□□ -1.51
COL4A3BPQ9Y5P4 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
COL4A3BPQ9Y5P4 NMNAT1P1-201ENST00000554095 876 ntBASIC5.61□□□□□ -1.51
COL4A3BPQ9Y5P4 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
COL4A3BPQ9Y5P4 HSPE1P3-201ENST00000559254 309 ntBASIC5.61□□□□□ -1.51
COL4A3BPQ9Y5P4 AC090616.2-202ENST00000584248 222 ntBASIC5.61□□□□□ -1.51
COL4A3BPQ9Y5P4 AC090229.1-201ENST00000590983 1609 ntBASIC5.61□□□□□ -1.51
COL4A3BPQ9Y5P4 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC5.61□□□□□ -1.51
COL4A3BPQ9Y5P4 AC104785.1-201ENST00000603220 588 ntBASIC5.61□□□□□ -1.51
COL4A3BPQ9Y5P4 MEMO1P5-201ENST00000604810 406 ntBASIC5.61□□□□□ -1.51
COL4A3BPQ9Y5P4 AC112694.2-201ENST00000623697 768 ntBASIC5.61□□□□□ -1.51
COL4A3BPQ9Y5P4 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
COL4A3BPQ9Y5P4 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
COL4A3BPQ9Y5P4 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
COL4A3BPQ9Y5P4 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
COL4A3BPQ9Y5P4 HSP90AA5P-201ENST00000438353 2192 ntBASIC5.6□□□□□ -1.51
COL4A3BPQ9Y5P4 AC100778.3-201ENST00000580060 1750 ntBASIC5.6□□□□□ -1.51
COL4A3BPQ9Y5P4 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
COL4A3BPQ9Y5P4 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL4A3BPQ9Y5P4 RN7SKP95-201ENST00000362860 303 ntBASIC5.6□□□□□ -1.51
COL4A3BPQ9Y5P4 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL4A3BPQ9Y5P4 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
COL4A3BPQ9Y5P4 EIF5P1-201ENST00000400019 1231 ntBASIC5.6□□□□□ -1.51
COL4A3BPQ9Y5P4 RPS15AP38-201ENST00000413110 372 ntBASIC5.6□□□□□ -1.51
COL4A3BPQ9Y5P4 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.6□□□□□ -1.51
COL4A3BPQ9Y5P4 UBE2D3P1-201ENST00000436669 444 ntBASIC5.6□□□□□ -1.51
COL4A3BPQ9Y5P4 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.6□□□□□ -1.51
COL4A3BPQ9Y5P4 TPT1P13-201ENST00000449760 499 ntBASIC5.6□□□□□ -1.51
COL4A3BPQ9Y5P4 AC026410.2-201ENST00000460281 156 ntBASIC5.6□□□□□ -1.51
COL4A3BPQ9Y5P4 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC5.6□□□□□ -1.51
COL4A3BPQ9Y5P4 AC239860.2-201ENST00000525886 270 ntBASIC5.6□□□□□ -1.51
COL4A3BPQ9Y5P4 RGS5-218ENST00000526176 574 ntTSL 4 BASIC5.6□□□□□ -1.51
COL4A3BPQ9Y5P4 DEFB131D-201ENST00000526803 184 ntBASIC5.6□□□□□ -1.51
COL4A3BPQ9Y5P4 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms