Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
PCDHGA11Q9Y5H2 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC6.34□□□□□ -1.39
PCDHGA11Q9Y5H2 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.34□□□□□ -1.39
PCDHGA11Q9Y5H2 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
PCDHGA11Q9Y5H2 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC6.34□□□□□ -1.39
PCDHGA11Q9Y5H2 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.34□□□□□ -1.39
PCDHGA11Q9Y5H2 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
PCDHGA11Q9Y5H2 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
PCDHGA11Q9Y5H2 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.34□□□□□ -1.39
PCDHGA11Q9Y5H2 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PCDHGA11Q9Y5H2 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PCDHGA11Q9Y5H2 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
PCDHGA11Q9Y5H2 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
PCDHGA11Q9Y5H2 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC6.34□□□□□ -1.39
PCDHGA11Q9Y5H2 SNORA70H-201ENST00000383910 135 ntBASIC6.34□□□□□ -1.39
PCDHGA11Q9Y5H2 SNORA70J-201ENST00000384182 135 ntBASIC6.34□□□□□ -1.39
PCDHGA11Q9Y5H2 RNU6-574P-201ENST00000384265 107 ntBASIC6.34□□□□□ -1.39
PCDHGA11Q9Y5H2 RNU6-331P-201ENST00000384724 107 ntBASIC6.34□□□□□ -1.39
PCDHGA11Q9Y5H2 MIR27A-201ENST00000385073 78 ntBASIC6.34□□□□□ -1.39
PCDHGA11Q9Y5H2 MIR92A2-201ENST00000385299 75 ntBASIC6.34□□□□□ -1.39
PCDHGA11Q9Y5H2 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
PCDHGA11Q9Y5H2 RNU6-1106P-201ENST00000390845 107 ntBASIC6.34□□□□□ -1.39
PCDHGA11Q9Y5H2 CISD1P1-201ENST00000393907 327 ntBASIC6.34□□□□□ -1.39
PCDHGA11Q9Y5H2 AP003170.5-201ENST00000397185 335 ntBASIC6.34□□□□□ -1.39
PCDHGA11Q9Y5H2 RNU6-370P-201ENST00000411008 104 ntBASIC6.34□□□□□ -1.39
PCDHGA11Q9Y5H2 RN7SKP144-201ENST00000411108 279 ntBASIC6.34□□□□□ -1.39
PCDHGA11Q9Y5H2 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC6.34□□□□□ -1.39
PCDHGA11Q9Y5H2 PMCHL1-202ENST00000423102 261 ntBASIC6.34□□□□□ -1.39
PCDHGA11Q9Y5H2 UBBP5-201ENST00000446970 266 ntBASIC6.34□□□□□ -1.39
PCDHGA11Q9Y5H2 AL161722.1-201ENST00000446972 1032 ntBASIC6.34□□□□□ -1.39
PCDHGA11Q9Y5H2 HMGB3P22-202ENST00000451823 572 ntBASIC6.34□□□□□ -1.39
PCDHGA11Q9Y5H2 SNRPFP3-201ENST00000457792 225 ntBASIC6.34□□□□□ -1.39
PCDHGA11Q9Y5H2 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PCDHGA11Q9Y5H2 AC024558.1-201ENST00000505008 528 ntBASIC6.34□□□□□ -1.39
PCDHGA11Q9Y5H2 SMURF2P1-201ENST00000514992 481 ntBASIC6.34□□□□□ -1.39
PCDHGA11Q9Y5H2 RNU6-347P-201ENST00000516658 105 ntBASIC6.34□□□□□ -1.39
PCDHGA11Q9Y5H2 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.34□□□□□ -1.39
PCDHGA11Q9Y5H2 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC6.34□□□□□ -1.39
PCDHGA11Q9Y5H2 AC103843.2-201ENST00000530523 682 ntBASIC6.34□□□□□ -1.39
PCDHGA11Q9Y5H2 AP004607.5-201ENST00000532034 217 ntBASIC6.34□□□□□ -1.39
PCDHGA11Q9Y5H2 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC6.34□□□□□ -1.39
PCDHGA11Q9Y5H2 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PCDHGA11Q9Y5H2 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PCDHGA11Q9Y5H2 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC6.34□□□□□ -1.39
PCDHGA11Q9Y5H2 AC090651.1-201ENST00000567865 634 ntBASIC6.34□□□□□ -1.39
PCDHGA11Q9Y5H2 COX6CP3-201ENST00000580869 223 ntBASIC6.34□□□□□ -1.39
PCDHGA11Q9Y5H2 MIR4424-201ENST00000585257 86 ntBASIC6.34□□□□□ -1.39
PCDHGA11Q9Y5H2 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC6.34□□□□□ -1.39
PCDHGA11Q9Y5H2 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC6.34□□□□□ -1.39
PCDHGA11Q9Y5H2 RPS4XP21-201ENST00000603814 750 ntBASIC6.34□□□□□ -1.39
PCDHGA11Q9Y5H2 AC019257.2-201ENST00000605539 497 ntBASIC6.34□□□□□ -1.39
PCDHGA11Q9Y5H2 AP001264.1-201ENST00000620602 703 ntBASIC6.34□□□□□ -1.39
PCDHGA11Q9Y5H2 U6.114-201ENST00000636407 96 ntBASIC6.34□□□□□ -1.39
PCDHGA11Q9Y5H2 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
PCDHGA11Q9Y5H2 AC002525.1-201ENST00000624392 1622 ntBASIC6.34□□□□□ -1.39
PCDHGA11Q9Y5H2 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
PCDHGA11Q9Y5H2 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
PCDHGA11Q9Y5H2 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.34□□□□□ -1.39
PCDHGA11Q9Y5H2 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PCDHGA11Q9Y5H2 MTND5P10-201ENST00000603719 1809 ntBASIC6.34□□□□□ -1.4
PCDHGA11Q9Y5H2 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.34□□□□□ -1.4
PCDHGA11Q9Y5H2 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
PCDHGA11Q9Y5H2 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 TAB3P1-202ENST00000452645 1634 ntBASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 AC010329.1-201ENST00000593903 8328 ntBASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 BTK-209ENST00000618050 2417 ntTSL 5 BASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 Y_RNA.31-201ENST00000362574 102 ntBASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 RN7SKP118-201ENST00000364331 330 ntBASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 RNU6-1226P-201ENST00000384317 107 ntBASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 AL590635.1-201ENST00000406314 586 ntBASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 MORN2-202ENST00000409077 465 ntTSL 5 BASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 RN7SKP247-201ENST00000411094 308 ntBASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 AL139396.1-201ENST00000421137 167 ntBASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 SNRPEP4-201ENST00000435815 279 ntBASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 SUMO2P3-201ENST00000438311 288 ntBASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 ATP6V1G1P4-201ENST00000438388 335 ntBASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 PRPS1P1-201ENST00000445305 876 ntBASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 AC009244.1-201ENST00000450566 258 ntBASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 AC022080.2-201ENST00000452932 533 ntBASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 AC016724.1-201ENST00000453215 421 ntBASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 AC091685.2-201ENST00000454924 864 ntBASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms