Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 AC241377.1-201ENST00000619797 406 ntBASIC6.47□□□□□ -1.37
PCDHB11Q9Y5F2 AC061999.1-201ENST00000624454 177 ntBASIC6.47□□□□□ -1.37
PCDHB11Q9Y5F2 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC6.47□□□□□ -1.37
PCDHB11Q9Y5F2 OR52H1-202ENST00000641796 1061 ntBASIC6.47□□□□□ -1.37
PCDHB11Q9Y5F2 AC007406.5-201ENST00000570140 3170 ntBASIC6.47□□□□□ -1.37
PCDHB11Q9Y5F2 AC122713.2-201ENST00000624942 3335 ntBASIC6.47□□□□□ -1.37
PCDHB11Q9Y5F2 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
PCDHB11Q9Y5F2 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
PCDHB11Q9Y5F2 LCOR-201ENST00000286067 4542 ntBASIC6.47□□□□□ -1.37
PCDHB11Q9Y5F2 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC6.47□□□□□ -1.37
PCDHB11Q9Y5F2 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PCDHB11Q9Y5F2 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
PCDHB11Q9Y5F2 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
PCDHB11Q9Y5F2 AC009902.3-201ENST00000606235 2172 ntBASIC6.47□□□□□ -1.37
PCDHB11Q9Y5F2 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
PCDHB11Q9Y5F2 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
PCDHB11Q9Y5F2 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
PCDHB11Q9Y5F2 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC6.46□□□□□ -1.37
PCDHB11Q9Y5F2 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC6.46□□□□□ -1.37
PCDHB11Q9Y5F2 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
PCDHB11Q9Y5F2 AC121333.1-201ENST00000567488 2709 ntBASIC6.46□□□□□ -1.38
PCDHB11Q9Y5F2 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
PCDHB11Q9Y5F2 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
PCDHB11Q9Y5F2 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
PCDHB11Q9Y5F2 Y_RNA.47-201ENST00000362697 108 ntBASIC6.46□□□□□ -1.38
PCDHB11Q9Y5F2 Y_RNA.135-201ENST00000363439 95 ntBASIC6.46□□□□□ -1.38
PCDHB11Q9Y5F2 SNORA38B-201ENST00000363524 131 ntBASIC6.46□□□□□ -1.38
PCDHB11Q9Y5F2 U3.11-201ENST00000364476 212 ntBASIC6.46□□□□□ -1.38
PCDHB11Q9Y5F2 RN7SKP269-201ENST00000365545 319 ntBASIC6.46□□□□□ -1.38
PCDHB11Q9Y5F2 RNU6-1029P-201ENST00000384109 107 ntBASIC6.46□□□□□ -1.38
PCDHB11Q9Y5F2 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
PCDHB11Q9Y5F2 RN7SKP188-201ENST00000410789 317 ntBASIC6.46□□□□□ -1.38
PCDHB11Q9Y5F2 HSD17B7P1-201ENST00000412419 1017 ntBASIC6.46□□□□□ -1.38
PCDHB11Q9Y5F2 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
PCDHB11Q9Y5F2 AL139396.1-201ENST00000421137 167 ntBASIC6.46□□□□□ -1.38
PCDHB11Q9Y5F2 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC6.46□□□□□ -1.38
PCDHB11Q9Y5F2 HNRNPA3P4-201ENST00000427514 803 ntBASIC6.46□□□□□ -1.38
PCDHB11Q9Y5F2 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC6.46□□□□□ -1.38
PCDHB11Q9Y5F2 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
PCDHB11Q9Y5F2 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC6.46□□□□□ -1.38
PCDHB11Q9Y5F2 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC6.46□□□□□ -1.38
PCDHB11Q9Y5F2 AL118520.1-201ENST00000450770 291 ntBASIC6.46□□□□□ -1.38
PCDHB11Q9Y5F2 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC6.46□□□□□ -1.38
PCDHB11Q9Y5F2 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6.46□□□□□ -1.38
PCDHB11Q9Y5F2 RPL35AP28-201ENST00000459730 331 ntBASIC6.46□□□□□ -1.38
PCDHB11Q9Y5F2 AC021382.1-201ENST00000483523 359 ntBASIC6.46□□□□□ -1.38
PCDHB11Q9Y5F2 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC6.46□□□□□ -1.38
PCDHB11Q9Y5F2 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC6.46□□□□□ -1.38
PCDHB11Q9Y5F2 RNU6-764P-201ENST00000516396 105 ntBASIC6.46□□□□□ -1.38
PCDHB11Q9Y5F2 RNU6-1038P-201ENST00000516516 104 ntBASIC6.46□□□□□ -1.38
PCDHB11Q9Y5F2 IGHV7-34-1-201ENST00000519200 350 ntBASIC6.46□□□□□ -1.38
PCDHB11Q9Y5F2 OR4P1P-201ENST00000530808 1136 ntBASIC6.46□□□□□ -1.38
PCDHB11Q9Y5F2 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC6.46□□□□□ -1.38
PCDHB11Q9Y5F2 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC6.46□□□□□ -1.38
PCDHB11Q9Y5F2 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC6.46□□□□□ -1.38
PCDHB11Q9Y5F2 MIR4703-201ENST00000577728 79 ntBASIC6.46□□□□□ -1.38
PCDHB11Q9Y5F2 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
PCDHB11Q9Y5F2 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
PCDHB11Q9Y5F2 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC6.46□□□□□ -1.38
PCDHB11Q9Y5F2 AC011921.2-201ENST00000589465 152 ntBASIC6.46□□□□□ -1.38
PCDHB11Q9Y5F2 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC6.46□□□□□ -1.38
PCDHB11Q9Y5F2 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC6.46□□□□□ -1.38
PCDHB11Q9Y5F2 NUTF2P8-201ENST00000604593 363 ntBASIC6.46□□□□□ -1.38
PCDHB11Q9Y5F2 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC6.46□□□□□ -1.38
PCDHB11Q9Y5F2 AC004241.2-201ENST00000614562 444 ntBASIC6.46□□□□□ -1.38
PCDHB11Q9Y5F2 AL354718.1-201ENST00000619764 589 ntBASIC6.46□□□□□ -1.38
PCDHB11Q9Y5F2 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC6.46□□□□□ -1.38
PCDHB11Q9Y5F2 AC105749.1-201ENST00000631338 2008 ntBASIC6.46□□□□□ -1.38
PCDHB11Q9Y5F2 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC6.46□□□□□ -1.38
PCDHB11Q9Y5F2 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.46□□□□□ -1.38
PCDHB11Q9Y5F2 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
PCDHB11Q9Y5F2 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
PCDHB11Q9Y5F2 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
PCDHB11Q9Y5F2 AC008957.3-201ENST00000624112 2242 ntBASIC6.46□□□□□ -1.38
PCDHB11Q9Y5F2 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.46□□□□□ -1.38
PCDHB11Q9Y5F2 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC6.46□□□□□ -1.38
PCDHB11Q9Y5F2 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.46□□□□□ -1.38
PCDHB11Q9Y5F2 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.46□□□□□ -1.38
PCDHB11Q9Y5F2 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
PCDHB11Q9Y5F2 SELE-203ENST00000367775 3389 ntTSL 5 BASIC6.46□□□□□ -1.38
PCDHB11Q9Y5F2 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
PCDHB11Q9Y5F2 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
PCDHB11Q9Y5F2 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.45□□□□□ -1.38
PCDHB11Q9Y5F2 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
PCDHB11Q9Y5F2 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
PCDHB11Q9Y5F2 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
PCDHB11Q9Y5F2 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
PCDHB11Q9Y5F2 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
PCDHB11Q9Y5F2 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
PCDHB11Q9Y5F2 AC090337.1-201ENST00000579651 2074 ntBASIC6.45□□□□□ -1.38
PCDHB11Q9Y5F2 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
PCDHB11Q9Y5F2 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
PCDHB11Q9Y5F2 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
PCDHB11Q9Y5F2 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
PCDHB11Q9Y5F2 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
PCDHB11Q9Y5F2 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
PCDHB11Q9Y5F2 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
PCDHB11Q9Y5F2 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
PCDHB11Q9Y5F2 RNA5SP258-201ENST00000362750 119 ntBASIC6.45□□□□□ -1.38
PCDHB11Q9Y5F2 SNORD113-7-201ENST00000363762 77 ntBASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms