Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
ATG4BQ9Y4P1 XPOTP1-201ENST00000443317 2398 ntBASIC3.98□□□□□ -1.77
ATG4BQ9Y4P1 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.98□□□□□ -1.77
ATG4BQ9Y4P1 AC026951.1-201ENST00000559530 2459 ntBASIC3.98□□□□□ -1.77
ATG4BQ9Y4P1 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
ATG4BQ9Y4P1 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
ATG4BQ9Y4P1 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.98□□□□□ -1.77
ATG4BQ9Y4P1 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.98□□□□□ -1.77
ATG4BQ9Y4P1 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.98□□□□□ -1.77
ATG4BQ9Y4P1 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
ATG4BQ9Y4P1 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
ATG4BQ9Y4P1 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
ATG4BQ9Y4P1 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
ATG4BQ9Y4P1 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
ATG4BQ9Y4P1 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
ATG4BQ9Y4P1 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
ATG4BQ9Y4P1 RNA5SP513-201ENST00000364648 118 ntBASIC3.97□□□□□ -1.77
ATG4BQ9Y4P1 AP002784.2-201ENST00000397300 549 ntBASIC3.97□□□□□ -1.77
ATG4BQ9Y4P1 FABP12P1-201ENST00000401911 322 ntBASIC3.97□□□□□ -1.77
ATG4BQ9Y4P1 HSPD1P16-201ENST00000402302 394 ntBASIC3.97□□□□□ -1.77
ATG4BQ9Y4P1 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.97□□□□□ -1.77
ATG4BQ9Y4P1 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.97□□□□□ -1.77
ATG4BQ9Y4P1 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.97□□□□□ -1.77
ATG4BQ9Y4P1 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.97□□□□□ -1.77
ATG4BQ9Y4P1 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.97□□□□□ -1.77
ATG4BQ9Y4P1 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC3.97□□□□□ -1.77
ATG4BQ9Y4P1 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.97□□□□□ -1.77
ATG4BQ9Y4P1 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.97□□□□□ -1.77
ATG4BQ9Y4P1 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
ATG4BQ9Y4P1 MRPL50P1-201ENST00000431951 384 ntBASIC3.97□□□□□ -1.77
ATG4BQ9Y4P1 RPS26P40-201ENST00000435209 294 ntBASIC3.97□□□□□ -1.77
ATG4BQ9Y4P1 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.97□□□□□ -1.77
ATG4BQ9Y4P1 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.97□□□□□ -1.77
ATG4BQ9Y4P1 RPL23AP89-201ENST00000439324 255 ntBASIC3.97□□□□□ -1.77
ATG4BQ9Y4P1 ZNF736P1Y-201ENST00000440402 1276 ntBASIC3.97□□□□□ -1.77
ATG4BQ9Y4P1 HMGB1P48-201ENST00000446155 598 ntBASIC3.97□□□□□ -1.77
ATG4BQ9Y4P1 AL162388.1-201ENST00000450912 352 ntBASIC3.97□□□□□ -1.77
ATG4BQ9Y4P1 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.97□□□□□ -1.77
ATG4BQ9Y4P1 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.97□□□□□ -1.77
ATG4BQ9Y4P1 AC126121.1-201ENST00000482313 553 ntBASIC3.97□□□□□ -1.77
ATG4BQ9Y4P1 AF213884.1-201ENST00000488102 463 ntBASIC3.97□□□□□ -1.77
ATG4BQ9Y4P1 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.97□□□□□ -1.77
ATG4BQ9Y4P1 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.97□□□□□ -1.77
ATG4BQ9Y4P1 AC091167.1-201ENST00000492017 396 ntBASIC3.97□□□□□ -1.77
ATG4BQ9Y4P1 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.97□□□□□ -1.77
ATG4BQ9Y4P1 MTATP6P22-201ENST00000507369 598 ntBASIC3.97□□□□□ -1.77
ATG4BQ9Y4P1 AC108475.1-201ENST00000507880 950 ntBASIC3.97□□□□□ -1.77
ATG4BQ9Y4P1 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
ATG4BQ9Y4P1 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.97□□□□□ -1.77
ATG4BQ9Y4P1 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.97□□□□□ -1.77
ATG4BQ9Y4P1 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.97□□□□□ -1.77
ATG4BQ9Y4P1 VN1R88P-201ENST00000596787 292 ntBASIC3.97□□□□□ -1.77
ATG4BQ9Y4P1 AL138960.2-201ENST00000625145 535 ntBASIC3.97□□□□□ -1.77
ATG4BQ9Y4P1 MIR3653-201ENST00000625572 110 ntBASIC3.97□□□□□ -1.77
ATG4BQ9Y4P1 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
ATG4BQ9Y4P1 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.96□□□□□ -1.77
ATG4BQ9Y4P1 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.96□□□□□ -1.77
ATG4BQ9Y4P1 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
ATG4BQ9Y4P1 AC011978.2-201ENST00000569835 2054 ntBASIC3.96□□□□□ -1.77
ATG4BQ9Y4P1 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
ATG4BQ9Y4P1 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.96□□□□□ -1.78
ATG4BQ9Y4P1 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
ATG4BQ9Y4P1 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
ATG4BQ9Y4P1 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
ATG4BQ9Y4P1 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
ATG4BQ9Y4P1 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.96□□□□□ -1.78
ATG4BQ9Y4P1 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
ATG4BQ9Y4P1 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
ATG4BQ9Y4P1 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.96□□□□□ -1.78
ATG4BQ9Y4P1 SNORA11C-201ENST00000408532 129 ntBASIC3.96□□□□□ -1.78
ATG4BQ9Y4P1 AC069282.1-201ENST00000411911 526 ntBASIC3.96□□□□□ -1.78
ATG4BQ9Y4P1 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC3.96□□□□□ -1.78
ATG4BQ9Y4P1 RWDD4P2-201ENST00000426392 563 ntBASIC3.96□□□□□ -1.78
ATG4BQ9Y4P1 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.96□□□□□ -1.78
ATG4BQ9Y4P1 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
ATG4BQ9Y4P1 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.96□□□□□ -1.78
ATG4BQ9Y4P1 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
ATG4BQ9Y4P1 RPL21P133-201ENST00000443666 476 ntBASIC3.96□□□□□ -1.78
ATG4BQ9Y4P1 NUTF2P3-201ENST00000448540 384 ntBASIC3.96□□□□□ -1.78
ATG4BQ9Y4P1 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC3.96□□□□□ -1.78
ATG4BQ9Y4P1 AC105137.1-201ENST00000484355 562 ntBASIC3.96□□□□□ -1.78
ATG4BQ9Y4P1 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.96□□□□□ -1.78
ATG4BQ9Y4P1 AC025445.1-201ENST00000502728 300 ntBASIC3.96□□□□□ -1.78
ATG4BQ9Y4P1 AC008885.2-201ENST00000509506 930 ntBASIC3.96□□□□□ -1.78
ATG4BQ9Y4P1 AC006499.6-201ENST00000511169 607 ntBASIC3.96□□□□□ -1.78
ATG4BQ9Y4P1 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.96□□□□□ -1.78
ATG4BQ9Y4P1 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
ATG4BQ9Y4P1 CYCSP29-201ENST00000533731 318 ntBASIC3.96□□□□□ -1.78
ATG4BQ9Y4P1 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.96□□□□□ -1.78
ATG4BQ9Y4P1 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.96□□□□□ -1.78
ATG4BQ9Y4P1 AC063950.1-201ENST00000552036 308 ntBASIC3.96□□□□□ -1.78
ATG4BQ9Y4P1 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.96□□□□□ -1.78
ATG4BQ9Y4P1 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC3.96□□□□□ -1.78
ATG4BQ9Y4P1 AC104072.1-201ENST00000568817 668 ntBASIC3.96□□□□□ -1.78
ATG4BQ9Y4P1 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
ATG4BQ9Y4P1 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC3.96□□□□□ -1.78
ATG4BQ9Y4P1 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
ATG4BQ9Y4P1 AC069304.3-201ENST00000603938 1084 ntBASIC3.96□□□□□ -1.78
ATG4BQ9Y4P1 AC010680.4-201ENST00000605334 543 ntBASIC3.96□□□□□ -1.78
ATG4BQ9Y4P1 MKKS-203ENST00000609375 882 ntTSL 2 BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms