Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC4.53□□□□□ -1.68
SIX4Q9UIU6 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.53□□□□□ -1.68
SIX4Q9UIU6 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SIX4Q9UIU6 AC131238.1-201ENST00000617135 328 ntBASIC4.53□□□□□ -1.68
SIX4Q9UIU6 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.53□□□□□ -1.68
SIX4Q9UIU6 AC009039.2-201ENST00000624524 529 ntBASIC4.53□□□□□ -1.68
SIX4Q9UIU6 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.53□□□□□ -1.68
SIX4Q9UIU6 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.53□□□□□ -1.68
SIX4Q9UIU6 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SIX4Q9UIU6 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.53□□□□□ -1.68
SIX4Q9UIU6 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.53□□□□□ -1.68
SIX4Q9UIU6 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.53□□□□□ -1.68
SIX4Q9UIU6 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
SIX4Q9UIU6 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.53□□□□□ -1.69
SIX4Q9UIU6 MTND4P8-201ENST00000514997 1362 ntBASIC4.53□□□□□ -1.69
SIX4Q9UIU6 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.53□□□□□ -1.69
SIX4Q9UIU6 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SIX4Q9UIU6 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SIX4Q9UIU6 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SIX4Q9UIU6 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SIX4Q9UIU6 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SIX4Q9UIU6 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
SIX4Q9UIU6 RNU6-224P-201ENST00000384055 107 ntBASIC4.52□□□□□ -1.69
SIX4Q9UIU6 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SIX4Q9UIU6 RN7SKP33-201ENST00000410942 340 ntBASIC4.52□□□□□ -1.69
SIX4Q9UIU6 RPS7P9-201ENST00000414704 586 ntBASIC4.52□□□□□ -1.69
SIX4Q9UIU6 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.52□□□□□ -1.69
SIX4Q9UIU6 RBMY1KP-201ENST00000423480 476 ntBASIC4.52□□□□□ -1.69
SIX4Q9UIU6 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC4.52□□□□□ -1.69
SIX4Q9UIU6 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.52□□□□□ -1.69
SIX4Q9UIU6 PRELID3BP10-201ENST00000431957 584 ntBASIC4.52□□□□□ -1.69
SIX4Q9UIU6 AP000936.3-201ENST00000438127 255 ntBASIC4.52□□□□□ -1.69
SIX4Q9UIU6 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.52□□□□□ -1.69
SIX4Q9UIU6 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.52□□□□□ -1.69
SIX4Q9UIU6 RNA5SP246-201ENST00000458909 119 ntBASIC4.52□□□□□ -1.69
SIX4Q9UIU6 RPL7P19-201ENST00000469948 618 ntBASIC4.52□□□□□ -1.69
SIX4Q9UIU6 AF213884.1-201ENST00000488102 463 ntBASIC4.52□□□□□ -1.69
SIX4Q9UIU6 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.52□□□□□ -1.69
SIX4Q9UIU6 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.52□□□□□ -1.69
SIX4Q9UIU6 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.52□□□□□ -1.69
SIX4Q9UIU6 snoU109.6-201ENST00000516831 118 ntBASIC4.52□□□□□ -1.69
SIX4Q9UIU6 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC4.52□□□□□ -1.69
SIX4Q9UIU6 MRPS36P5-201ENST00000551909 298 ntBASIC4.52□□□□□ -1.69
SIX4Q9UIU6 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.52□□□□□ -1.69
SIX4Q9UIU6 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.52□□□□□ -1.69
SIX4Q9UIU6 AC124068.1-201ENST00000563131 678 ntBASIC4.52□□□□□ -1.69
SIX4Q9UIU6 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SIX4Q9UIU6 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.52□□□□□ -1.69
SIX4Q9UIU6 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SIX4Q9UIU6 MTND3P19-201ENST00000603825 345 ntBASIC4.52□□□□□ -1.69
SIX4Q9UIU6 AL035411.2-201ENST00000604022 421 ntBASIC4.52□□□□□ -1.69
SIX4Q9UIU6 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SIX4Q9UIU6 AC011472.4-201ENST00000615848 491 ntBASIC4.52□□□□□ -1.69
SIX4Q9UIU6 MIR7151-201ENST00000617477 60 ntBASIC4.52□□□□□ -1.69
SIX4Q9UIU6 AC010975.3-201ENST00000618727 978 ntBASIC4.52□□□□□ -1.69
SIX4Q9UIU6 AC013470.4-201ENST00000619978 986 ntBASIC4.52□□□□□ -1.69
SIX4Q9UIU6 AP003485.2-201ENST00000623636 610 ntBASIC4.52□□□□□ -1.69
SIX4Q9UIU6 UGP2-231ENST00000627474 264 ntTSL 5 BASIC4.52□□□□□ -1.69
SIX4Q9UIU6 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.52□□□□□ -1.69
SIX4Q9UIU6 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SIX4Q9UIU6 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
SIX4Q9UIU6 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SIX4Q9UIU6 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.52□□□□□ -1.69
SIX4Q9UIU6 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SIX4Q9UIU6 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SIX4Q9UIU6 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SIX4Q9UIU6 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
SIX4Q9UIU6 METTL21EP-201ENST00000298105 713 ntBASIC4.51□□□□□ -1.69
SIX4Q9UIU6 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
SIX4Q9UIU6 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
SIX4Q9UIU6 ANKRD36P1-201ENST00000344424 659 ntBASIC4.51□□□□□ -1.69
SIX4Q9UIU6 RNU1-94P-201ENST00000362627 173 ntBASIC4.51□□□□□ -1.69
SIX4Q9UIU6 RNU6-666P-201ENST00000363499 107 ntBASIC4.51□□□□□ -1.69
SIX4Q9UIU6 RNU6-185P-201ENST00000384421 107 ntBASIC4.51□□□□□ -1.69
SIX4Q9UIU6 RNU6-636P-201ENST00000384598 107 ntBASIC4.51□□□□□ -1.69
SIX4Q9UIU6 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SIX4Q9UIU6 MTCO2P31-201ENST00000402702 684 ntBASIC4.51□□□□□ -1.69
SIX4Q9UIU6 NCSTNP1-201ENST00000406229 144 ntBASIC4.51□□□□□ -1.69
SIX4Q9UIU6 OR8G2P-201ENST00000412796 908 ntBASIC4.51□□□□□ -1.69
SIX4Q9UIU6 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SIX4Q9UIU6 RPS24P7-201ENST00000416921 246 ntBASIC4.51□□□□□ -1.69
SIX4Q9UIU6 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.51□□□□□ -1.69
SIX4Q9UIU6 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC4.51□□□□□ -1.69
SIX4Q9UIU6 HMGB3P9-201ENST00000441799 583 ntBASIC4.51□□□□□ -1.69
SIX4Q9UIU6 AL050341.1-201ENST00000447743 313 ntBASIC4.51□□□□□ -1.69
SIX4Q9UIU6 VN1R40P-201ENST00000455196 941 ntBASIC4.51□□□□□ -1.69
SIX4Q9UIU6 RNU7-140P-201ENST00000459546 60 ntBASIC4.51□□□□□ -1.69
SIX4Q9UIU6 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
SIX4Q9UIU6 AC037198.2-201ENST00000478845 733 ntBASIC4.51□□□□□ -1.69
SIX4Q9UIU6 RPL21P6-201ENST00000479171 504 ntBASIC4.51□□□□□ -1.69
SIX4Q9UIU6 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.51□□□□□ -1.69
SIX4Q9UIU6 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.51□□□□□ -1.69
SIX4Q9UIU6 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC4.51□□□□□ -1.69
SIX4Q9UIU6 AC119751.1-201ENST00000513357 765 ntBASIC4.51□□□□□ -1.69
SIX4Q9UIU6 SNORA31.9-201ENST00000516429 84 ntBASIC4.51□□□□□ -1.69
SIX4Q9UIU6 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC4.51□□□□□ -1.69
SIX4Q9UIU6 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC4.51□□□□□ -1.69
SIX4Q9UIU6 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.51□□□□□ -1.69
SIX4Q9UIU6 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC4.51□□□□□ -1.69
SIX4Q9UIU6 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms