Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.66□□□□□ -1.66
PHRF1Q9P1Y6 RPS29P31-201ENST00000446147 164 ntBASIC4.66□□□□□ -1.66
PHRF1Q9P1Y6 NPM1P39-201ENST00000449818 867 ntBASIC4.66□□□□□ -1.66
PHRF1Q9P1Y6 MTND6P32-201ENST00000457611 483 ntBASIC4.66□□□□□ -1.66
PHRF1Q9P1Y6 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
PHRF1Q9P1Y6 AC103968.1-201ENST00000557841 573 ntBASIC4.66□□□□□ -1.66
PHRF1Q9P1Y6 AC067852.3-201ENST00000589177 561 ntBASIC4.66□□□□□ -1.66
PHRF1Q9P1Y6 AC022149.2-201ENST00000621061 203 ntBASIC4.66□□□□□ -1.66
PHRF1Q9P1Y6 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PHRF1Q9P1Y6 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
PHRF1Q9P1Y6 FAM35BP-202ENST00000497389 3337 ntBASIC4.66□□□□□ -1.66
PHRF1Q9P1Y6 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
PHRF1Q9P1Y6 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
PHRF1Q9P1Y6 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
PHRF1Q9P1Y6 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
PHRF1Q9P1Y6 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
PHRF1Q9P1Y6 MTND4LP20-201ENST00000402379 270 ntBASIC4.65□□□□□ -1.66
PHRF1Q9P1Y6 RSL24D1P1-201ENST00000404972 493 ntBASIC4.65□□□□□ -1.66
PHRF1Q9P1Y6 AL136131.1-201ENST00000406079 803 ntBASIC4.65□□□□□ -1.66
PHRF1Q9P1Y6 AP001992.1-205ENST00000462248 379 ntBASIC4.65□□□□□ -1.66
PHRF1Q9P1Y6 IGKV2-26-201ENST00000518305 343 ntBASIC4.65□□□□□ -1.66
PHRF1Q9P1Y6 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.65□□□□□ -1.66
PHRF1Q9P1Y6 AC119674.1-212ENST00000641155 993 ntBASIC4.65□□□□□ -1.66
PHRF1Q9P1Y6 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
PHRF1Q9P1Y6 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.65□□□□□ -1.67
PHRF1Q9P1Y6 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
PHRF1Q9P1Y6 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
PHRF1Q9P1Y6 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
PHRF1Q9P1Y6 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PHRF1Q9P1Y6 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PHRF1Q9P1Y6 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.64□□□□□ -1.67
PHRF1Q9P1Y6 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.64□□□□□ -1.67
PHRF1Q9P1Y6 RPS27AP1-201ENST00000475545 471 ntBASIC4.64□□□□□ -1.67
PHRF1Q9P1Y6 NPM1P17-201ENST00000479221 602 ntBASIC4.64□□□□□ -1.67
PHRF1Q9P1Y6 HMGB1P21-201ENST00000502313 581 ntBASIC4.64□□□□□ -1.67
PHRF1Q9P1Y6 AC004069.2-201ENST00000505438 1114 ntBASIC4.64□□□□□ -1.67
PHRF1Q9P1Y6 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC4.64□□□□□ -1.67
PHRF1Q9P1Y6 HMGN2P47-201ENST00000559378 272 ntBASIC4.64□□□□□ -1.67
PHRF1Q9P1Y6 AL139395.1-201ENST00000603662 160 ntBASIC4.64□□□□□ -1.67
PHRF1Q9P1Y6 AC015813.4-201ENST00000610469 179 ntBASIC4.64□□□□□ -1.67
PHRF1Q9P1Y6 AC009464.1-201ENST00000615731 469 ntBASIC4.64□□□□□ -1.67
PHRF1Q9P1Y6 AL713922.2-201ENST00000619384 716 ntBASIC4.64□□□□□ -1.67
PHRF1Q9P1Y6 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.64□□□□□ -1.67
PHRF1Q9P1Y6 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.64□□□□□ -1.67
PHRF1Q9P1Y6 AC007656.2-201ENST00000624902 4547 ntBASIC4.64□□□□□ -1.67
PHRF1Q9P1Y6 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.64□□□□□ -1.67
PHRF1Q9P1Y6 AC233263.6-201ENST00000631132 1963 ntBASIC4.64□□□□□ -1.67
PHRF1Q9P1Y6 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
PHRF1Q9P1Y6 RNU1-18P-201ENST00000363062 164 ntBASIC4.64□□□□□ -1.67
PHRF1Q9P1Y6 SNORA80A-201ENST00000363922 136 ntBASIC4.64□□□□□ -1.67
PHRF1Q9P1Y6 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.64□□□□□ -1.67
PHRF1Q9P1Y6 RN7SKP284-201ENST00000411002 343 ntBASIC4.64□□□□□ -1.67
PHRF1Q9P1Y6 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC4.64□□□□□ -1.67
PHRF1Q9P1Y6 ELOCP18-201ENST00000434209 337 ntBASIC4.64□□□□□ -1.67
PHRF1Q9P1Y6 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.64□□□□□ -1.67
PHRF1Q9P1Y6 AC084357.1-201ENST00000473404 255 ntBASIC4.64□□□□□ -1.67
PHRF1Q9P1Y6 BTF3L4P4-201ENST00000506381 449 ntBASIC4.64□□□□□ -1.67
PHRF1Q9P1Y6 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.64□□□□□ -1.67
PHRF1Q9P1Y6 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.64□□□□□ -1.67
PHRF1Q9P1Y6 AP000926.4-201ENST00000527351 454 ntBASIC4.64□□□□□ -1.67
PHRF1Q9P1Y6 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC4.64□□□□□ -1.67
PHRF1Q9P1Y6 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.64□□□□□ -1.67
PHRF1Q9P1Y6 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC4.64□□□□□ -1.67
PHRF1Q9P1Y6 AL162274.2-201ENST00000614406 332 ntBASIC4.64□□□□□ -1.67
PHRF1Q9P1Y6 AC019072.1-201ENST00000604535 1551 ntBASIC4.64□□□□□ -1.67
PHRF1Q9P1Y6 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.64□□□□□ -1.67
PHRF1Q9P1Y6 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.64□□□□□ -1.67
PHRF1Q9P1Y6 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
PHRF1Q9P1Y6 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
PHRF1Q9P1Y6 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
PHRF1Q9P1Y6 BTBD10P1-201ENST00000549824 1352 ntBASIC4.63□□□□□ -1.67
PHRF1Q9P1Y6 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.63□□□□□ -1.67
PHRF1Q9P1Y6 AL022322.2-201ENST00000624072 20397 ntBASIC4.63□□□□□ -1.67
PHRF1Q9P1Y6 RNA5SP229-201ENST00000410809 99 ntBASIC4.63□□□□□ -1.67
PHRF1Q9P1Y6 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.63□□□□□ -1.67
PHRF1Q9P1Y6 RPL7P28-201ENST00000437739 740 ntBASIC4.63□□□□□ -1.67
PHRF1Q9P1Y6 AF228730.2-201ENST00000438784 848 ntBASIC4.63□□□□□ -1.67
PHRF1Q9P1Y6 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.63□□□□□ -1.67
PHRF1Q9P1Y6 S100A11P2-201ENST00000467589 312 ntBASIC4.63□□□□□ -1.67
PHRF1Q9P1Y6 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.63□□□□□ -1.67
PHRF1Q9P1Y6 RNU4ATAC17P-201ENST00000517272 120 ntBASIC4.63□□□□□ -1.67
PHRF1Q9P1Y6 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.63□□□□□ -1.67
PHRF1Q9P1Y6 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.63□□□□□ -1.67
PHRF1Q9P1Y6 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.63□□□□□ -1.67
PHRF1Q9P1Y6 LARP7P3-201ENST00000579888 337 ntBASIC4.63□□□□□ -1.67
PHRF1Q9P1Y6 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PHRF1Q9P1Y6 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.63□□□□□ -1.67
PHRF1Q9P1Y6 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.63□□□□□ -1.67
PHRF1Q9P1Y6 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.63□□□□□ -1.67
PHRF1Q9P1Y6 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PHRF1Q9P1Y6 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
PHRF1Q9P1Y6 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PHRF1Q9P1Y6 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PHRF1Q9P1Y6 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
PHRF1Q9P1Y6 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.62□□□□□ -1.67
PHRF1Q9P1Y6 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PHRF1Q9P1Y6 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.62□□□□□ -1.67
PHRF1Q9P1Y6 RNU1-140P-201ENST00000365040 165 ntBASIC4.62□□□□□ -1.67
PHRF1Q9P1Y6 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PHRF1Q9P1Y6 BX842559.1-201ENST00000419615 532 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms