Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 AC106707.2-201ENST00000484182 374 ntBASIC4.55□□□□□ -1.68
SALL1Q9NSC2 AC026726.1-201ENST00000512859 601 ntBASIC4.55□□□□□ -1.68
SALL1Q9NSC2 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.55□□□□□ -1.68
SALL1Q9NSC2 IGKV2D-19-201ENST00000523346 262 ntBASIC4.55□□□□□ -1.68
SALL1Q9NSC2 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.55□□□□□ -1.68
SALL1Q9NSC2 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC4.55□□□□□ -1.68
SALL1Q9NSC2 MIR3908-201ENST00000579798 126 ntBASIC4.55□□□□□ -1.68
SALL1Q9NSC2 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.55□□□□□ -1.68
SALL1Q9NSC2 AC244505.7-201ENST00000599675 272 ntBASIC4.55□□□□□ -1.68
SALL1Q9NSC2 AL161756.2-201ENST00000604597 246 ntBASIC4.55□□□□□ -1.68
SALL1Q9NSC2 AL137849.1-201ENST00000604767 169 ntBASIC4.55□□□□□ -1.68
SALL1Q9NSC2 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.55□□□□□ -1.68
SALL1Q9NSC2 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SALL1Q9NSC2 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
SALL1Q9NSC2 SNORA63.1-201ENST00000362493 131 ntBASIC4.54□□□□□ -1.68
SALL1Q9NSC2 SNORA27.3-201ENST00000364937 134 ntBASIC4.54□□□□□ -1.68
SALL1Q9NSC2 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SALL1Q9NSC2 RPL7P60-201ENST00000397636 735 ntBASIC4.54□□□□□ -1.68
SALL1Q9NSC2 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.54□□□□□ -1.68
SALL1Q9NSC2 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.54□□□□□ -1.68
SALL1Q9NSC2 RPL23AP71-201ENST00000470966 469 ntBASIC4.54□□□□□ -1.68
SALL1Q9NSC2 AC005726.1-201ENST00000494679 427 ntBASIC4.54□□□□□ -1.68
SALL1Q9NSC2 HMGN1P11-201ENST00000508668 303 ntBASIC4.54□□□□□ -1.68
SALL1Q9NSC2 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.54□□□□□ -1.68
SALL1Q9NSC2 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.54□□□□□ -1.68
SALL1Q9NSC2 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.54□□□□□ -1.68
SALL1Q9NSC2 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC4.54□□□□□ -1.68
SALL1Q9NSC2 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.54□□□□□ -1.68
SALL1Q9NSC2 AC106730.3-201ENST00000624568 641 ntBASIC4.54□□□□□ -1.68
SALL1Q9NSC2 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC4.54□□□□□ -1.68
SALL1Q9NSC2 CASC19-284ENST00000642142 1868 ntBASIC4.54□□□□□ -1.68
SALL1Q9NSC2 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.54□□□□□ -1.68
SALL1Q9NSC2 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.54□□□□□ -1.68
SALL1Q9NSC2 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
SALL1Q9NSC2 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.54□□□□□ -1.68
SALL1Q9NSC2 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
SALL1Q9NSC2 AC007342.7-201ENST00000624610 2337 ntBASIC4.54□□□□□ -1.68
SALL1Q9NSC2 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
SALL1Q9NSC2 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.54□□□□□ -1.68
SALL1Q9NSC2 AC032011.1-201ENST00000611703 1549 ntBASIC4.54□□□□□ -1.68
SALL1Q9NSC2 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SALL1Q9NSC2 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.54□□□□□ -1.68
SALL1Q9NSC2 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.54□□□□□ -1.68
SALL1Q9NSC2 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.53□□□□□ -1.68
SALL1Q9NSC2 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SALL1Q9NSC2 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SALL1Q9NSC2 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SALL1Q9NSC2 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.53□□□□□ -1.68
SALL1Q9NSC2 AC012497.1-201ENST00000429392 575 ntBASIC4.53□□□□□ -1.68
SALL1Q9NSC2 YME1L1P1-201ENST00000429435 297 ntBASIC4.53□□□□□ -1.68
SALL1Q9NSC2 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.53□□□□□ -1.68
SALL1Q9NSC2 CYCSP43-201ENST00000438233 310 ntBASIC4.53□□□□□ -1.68
SALL1Q9NSC2 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC4.53□□□□□ -1.68
SALL1Q9NSC2 HMGB3P9-201ENST00000441799 583 ntBASIC4.53□□□□□ -1.68
SALL1Q9NSC2 AC099063.2-201ENST00000446360 662 ntBASIC4.53□□□□□ -1.68
SALL1Q9NSC2 MTND2P25-201ENST00000449028 610 ntBASIC4.53□□□□□ -1.68
SALL1Q9NSC2 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.53□□□□□ -1.68
SALL1Q9NSC2 AL049829.1-201ENST00000465411 156 ntBASIC4.53□□□□□ -1.68
SALL1Q9NSC2 RWDD4P1-201ENST00000488019 565 ntBASIC4.53□□□□□ -1.68
SALL1Q9NSC2 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC4.53□□□□□ -1.68
SALL1Q9NSC2 PCNAP1-201ENST00000505363 709 ntBASIC4.53□□□□□ -1.68
SALL1Q9NSC2 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.53□□□□□ -1.68
SALL1Q9NSC2 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.53□□□□□ -1.68
SALL1Q9NSC2 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.53□□□□□ -1.68
SALL1Q9NSC2 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.53□□□□□ -1.68
SALL1Q9NSC2 AC020914.6-201ENST00000594327 272 ntBASIC4.53□□□□□ -1.68
SALL1Q9NSC2 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.53□□□□□ -1.68
SALL1Q9NSC2 AC040174.2-201ENST00000602701 465 ntBASIC4.53□□□□□ -1.68
SALL1Q9NSC2 AL133247.2-201ENST00000603236 482 ntBASIC4.53□□□□□ -1.68
SALL1Q9NSC2 HMGB1P51-201ENST00000605166 638 ntBASIC4.53□□□□□ -1.68
SALL1Q9NSC2 AC012213.4-201ENST00000606457 354 ntBASIC4.53□□□□□ -1.68
SALL1Q9NSC2 LINC00216-201ENST00000623548 1126 ntBASIC4.53□□□□□ -1.68
SALL1Q9NSC2 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.53□□□□□ -1.68
SALL1Q9NSC2 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.53□□□□□ -1.68
SALL1Q9NSC2 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC4.53□□□□□ -1.68
SALL1Q9NSC2 AL445437.1-201ENST00000623157 3087 ntBASIC4.53□□□□□ -1.68
SALL1Q9NSC2 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.53□□□□□ -1.68
SALL1Q9NSC2 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.53□□□□□ -1.68
SALL1Q9NSC2 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
SALL1Q9NSC2 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.53□□□□□ -1.68
SALL1Q9NSC2 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
SALL1Q9NSC2 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SALL1Q9NSC2 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.52□□□□□ -1.69
SALL1Q9NSC2 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
SALL1Q9NSC2 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
SALL1Q9NSC2 RNA5SP322-201ENST00000363617 119 ntBASIC4.52□□□□□ -1.69
SALL1Q9NSC2 ATP5F1P4-201ENST00000397288 746 ntBASIC4.52□□□□□ -1.69
SALL1Q9NSC2 NCSTNP1-201ENST00000406229 144 ntBASIC4.52□□□□□ -1.69
SALL1Q9NSC2 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
SALL1Q9NSC2 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.52□□□□□ -1.69
SALL1Q9NSC2 AL590609.2-201ENST00000421430 368 ntBASIC4.52□□□□□ -1.69
SALL1Q9NSC2 MTND4LP14-201ENST00000429447 288 ntBASIC4.52□□□□□ -1.69
SALL1Q9NSC2 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.52□□□□□ -1.69
SALL1Q9NSC2 Z99127.2-201ENST00000441426 334 ntBASIC4.52□□□□□ -1.69
SALL1Q9NSC2 FTH1P25-201ENST00000447665 469 ntBASIC4.52□□□□□ -1.69
SALL1Q9NSC2 RPS3AP46-201ENST00000448352 682 ntBASIC4.52□□□□□ -1.69
SALL1Q9NSC2 AC006480.1-201ENST00000449887 378 ntBASIC4.52□□□□□ -1.69
SALL1Q9NSC2 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
SALL1Q9NSC2 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.52□□□□□ -1.69
SALL1Q9NSC2 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms