Protein–RNA interactions for Protein: Q9NPP4

NLRC4, NLR family CARD domain-containing protein 4, humanhuman

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4Q9NPP4 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NLRC4Q9NPP4 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NLRC4Q9NPP4 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
NLRC4Q9NPP4 RN7SKP104-201ENST00000362605 328 ntBASIC5.08□□□□□ -1.6
NLRC4Q9NPP4 RNU6-984P-201ENST00000363236 109 ntBASIC5.08□□□□□ -1.6
NLRC4Q9NPP4 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC5.08□□□□□ -1.6
NLRC4Q9NPP4 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
NLRC4Q9NPP4 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
NLRC4Q9NPP4 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC5.08□□□□□ -1.6
NLRC4Q9NPP4 RN7SKP199-201ENST00000410325 305 ntBASIC5.08□□□□□ -1.6
NLRC4Q9NPP4 RN7SKP213-201ENST00000410746 298 ntBASIC5.08□□□□□ -1.6
NLRC4Q9NPP4 AL139421.1-201ENST00000423010 169 ntBASIC5.08□□□□□ -1.6
NLRC4Q9NPP4 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC5.08□□□□□ -1.6
NLRC4Q9NPP4 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC5.08□□□□□ -1.6
NLRC4Q9NPP4 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.08□□□□□ -1.6
NLRC4Q9NPP4 RPL37P6-202ENST00000464216 403 ntBASIC5.08□□□□□ -1.6
NLRC4Q9NPP4 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC5.08□□□□□ -1.6
NLRC4Q9NPP4 RNF138P1-201ENST00000502765 546 ntBASIC5.08□□□□□ -1.6
NLRC4Q9NPP4 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.08□□□□□ -1.6
NLRC4Q9NPP4 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC5.08□□□□□ -1.6
NLRC4Q9NPP4 AC008638.1-201ENST00000506035 866 ntBASIC5.08□□□□□ -1.6
NLRC4Q9NPP4 AC016065.2-201ENST00000514530 444 ntBASIC5.08□□□□□ -1.6
NLRC4Q9NPP4 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC5.08□□□□□ -1.6
NLRC4Q9NPP4 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC5.08□□□□□ -1.6
NLRC4Q9NPP4 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
NLRC4Q9NPP4 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC5.08□□□□□ -1.6
NLRC4Q9NPP4 AC090502.2-201ENST00000549267 280 ntBASIC5.08□□□□□ -1.6
NLRC4Q9NPP4 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.08□□□□□ -1.6
NLRC4Q9NPP4 HMGB3P26-201ENST00000560051 582 ntBASIC5.08□□□□□ -1.6
NLRC4Q9NPP4 SULT1C2P1-202ENST00000562418 459 ntBASIC5.08□□□□□ -1.6
NLRC4Q9NPP4 AC079171.1-201ENST00000568788 914 ntBASIC5.08□□□□□ -1.6
NLRC4Q9NPP4 OR4K7P-201ENST00000580232 945 ntBASIC5.08□□□□□ -1.6
NLRC4Q9NPP4 AC209154.1-201ENST00000582156 337 ntBASIC5.08□□□□□ -1.6
NLRC4Q9NPP4 AC107982.3-201ENST00000584957 985 ntBASIC5.08□□□□□ -1.6
NLRC4Q9NPP4 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC5.08□□□□□ -1.6
NLRC4Q9NPP4 VN1R78P-201ENST00000597393 564 ntBASIC5.08□□□□□ -1.6
NLRC4Q9NPP4 AC087763.1-201ENST00000603391 286 ntBASIC5.08□□□□□ -1.6
NLRC4Q9NPP4 AC013244.1-201ENST00000604279 193 ntBASIC5.08□□□□□ -1.6
NLRC4Q9NPP4 AL445222.1-201ENST00000607259 628 ntBASIC5.08□□□□□ -1.6
NLRC4Q9NPP4 AL355493.4-201ENST00000618530 292 ntBASIC5.08□□□□□ -1.6
NLRC4Q9NPP4 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NLRC4Q9NPP4 AC005086.4-201ENST00000623065 213 ntBASIC5.08□□□□□ -1.6
NLRC4Q9NPP4 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.08□□□□□ -1.6
NLRC4Q9NPP4 AC112694.2-201ENST00000623697 768 ntBASIC5.08□□□□□ -1.6
NLRC4Q9NPP4 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
NLRC4Q9NPP4 MIR4496-201ENST00000635896 61 ntBASIC5.08□□□□□ -1.6
NLRC4Q9NPP4 MIR4278-201ENST00000636094 69 ntBASIC5.08□□□□□ -1.6
NLRC4Q9NPP4 AL442639.1-201ENST00000625030 1899 ntBASIC5.08□□□□□ -1.6
NLRC4Q9NPP4 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.08□□□□□ -1.6
NLRC4Q9NPP4 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NLRC4Q9NPP4 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.08□□□□□ -1.6
NLRC4Q9NPP4 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
NLRC4Q9NPP4 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
NLRC4Q9NPP4 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.08□□□□□ -1.6
NLRC4Q9NPP4 LINC01109-201ENST00000603837 3081 ntBASIC5.08□□□□□ -1.6
NLRC4Q9NPP4 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NLRC4Q9NPP4 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.07□□□□□ -1.6
NLRC4Q9NPP4 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
NLRC4Q9NPP4 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
NLRC4Q9NPP4 AC109780.1-201ENST00000451768 1344 ntBASIC5.07□□□□□ -1.6
NLRC4Q9NPP4 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NLRC4Q9NPP4 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
NLRC4Q9NPP4 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
NLRC4Q9NPP4 Y_RNA.408-201ENST00000383987 102 ntBASIC5.07□□□□□ -1.6
NLRC4Q9NPP4 RNU6-1226P-201ENST00000384317 107 ntBASIC5.07□□□□□ -1.6
NLRC4Q9NPP4 AL023807.1-201ENST00000407932 359 ntBASIC5.07□□□□□ -1.6
NLRC4Q9NPP4 DPPA2P3-201ENST00000411853 655 ntBASIC5.07□□□□□ -1.6
NLRC4Q9NPP4 AL133384.1-201ENST00000412744 351 ntBASIC5.07□□□□□ -1.6
NLRC4Q9NPP4 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC5.07□□□□□ -1.6
NLRC4Q9NPP4 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.07□□□□□ -1.6
NLRC4Q9NPP4 AC006960.1-201ENST00000419980 153 ntBASIC5.07□□□□□ -1.6
NLRC4Q9NPP4 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC5.07□□□□□ -1.6
NLRC4Q9NPP4 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC5.07□□□□□ -1.6
NLRC4Q9NPP4 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC5.07□□□□□ -1.6
NLRC4Q9NPP4 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.07□□□□□ -1.6
NLRC4Q9NPP4 RPL31P54-201ENST00000429803 370 ntBASIC5.07□□□□□ -1.6
NLRC4Q9NPP4 AC073143.1-201ENST00000436316 395 ntBASIC5.07□□□□□ -1.6
NLRC4Q9NPP4 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC5.07□□□□□ -1.6
NLRC4Q9NPP4 RPL23AP16-201ENST00000441715 421 ntBASIC5.07□□□□□ -1.6
NLRC4Q9NPP4 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC5.07□□□□□ -1.6
NLRC4Q9NPP4 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC5.07□□□□□ -1.6
NLRC4Q9NPP4 Z77249.1-201ENST00000444622 1175 ntBASIC5.07□□□□□ -1.6
NLRC4Q9NPP4 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NLRC4Q9NPP4 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.07□□□□□ -1.6
NLRC4Q9NPP4 MTND1P16-201ENST00000465177 898 ntBASIC5.07□□□□□ -1.6
NLRC4Q9NPP4 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.07□□□□□ -1.6
NLRC4Q9NPP4 GAPDHP36-201ENST00000480688 918 ntBASIC5.07□□□□□ -1.6
NLRC4Q9NPP4 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC5.07□□□□□ -1.6
NLRC4Q9NPP4 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC5.07□□□□□ -1.6
NLRC4Q9NPP4 RN7SL808P-201ENST00000496066 299 ntBASIC5.07□□□□□ -1.6
NLRC4Q9NPP4 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.07□□□□□ -1.6
NLRC4Q9NPP4 RNU1-6P-201ENST00000516290 144 ntBASIC5.07□□□□□ -1.6
NLRC4Q9NPP4 RN7SKP234-201ENST00000517173 224 ntBASIC5.07□□□□□ -1.6
NLRC4Q9NPP4 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC5.07□□□□□ -1.6
NLRC4Q9NPP4 ZNF705CP-201ENST00000530515 889 ntBASIC5.07□□□□□ -1.6
NLRC4Q9NPP4 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.07□□□□□ -1.6
NLRC4Q9NPP4 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.07□□□□□ -1.6
NLRC4Q9NPP4 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC5.07□□□□□ -1.6
NLRC4Q9NPP4 AC115621.1-201ENST00000604653 858 ntBASIC5.07□□□□□ -1.6
NLRC4Q9NPP4 AC131235.4-201ENST00000609288 620 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 142.4 ms