Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
POLR1BQ9H9Y6 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
POLR1BQ9H9Y6 RNA5SP509-201ENST00000364577 119 ntBASIC4.55□□□□□ -1.68
POLR1BQ9H9Y6 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.55□□□□□ -1.68
POLR1BQ9H9Y6 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
POLR1BQ9H9Y6 SNORD116-12-201ENST00000384468 92 ntBASIC4.55□□□□□ -1.68
POLR1BQ9H9Y6 RPS24P12-201ENST00000402084 394 ntBASIC4.55□□□□□ -1.68
POLR1BQ9H9Y6 GSTA8P-201ENST00000404253 637 ntBASIC4.55□□□□□ -1.68
POLR1BQ9H9Y6 RN7SKP267-201ENST00000410381 285 ntBASIC4.55□□□□□ -1.68
POLR1BQ9H9Y6 RN7SKP263-201ENST00000411194 309 ntBASIC4.55□□□□□ -1.68
POLR1BQ9H9Y6 RGS17P1-201ENST00000423358 553 ntBASIC4.55□□□□□ -1.68
POLR1BQ9H9Y6 RPL30P3-201ENST00000424262 333 ntBASIC4.55□□□□□ -1.68
POLR1BQ9H9Y6 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC4.55□□□□□ -1.68
POLR1BQ9H9Y6 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.55□□□□□ -1.68
POLR1BQ9H9Y6 TDGF1P1-201ENST00000445734 527 ntBASIC4.55□□□□□ -1.68
POLR1BQ9H9Y6 AL589880.1-201ENST00000448271 287 ntBASIC4.55□□□□□ -1.68
POLR1BQ9H9Y6 OFD1P7Y-201ENST00000454643 1155 ntBASIC4.55□□□□□ -1.68
POLR1BQ9H9Y6 AC092155.2-201ENST00000454675 477 ntBASIC4.55□□□□□ -1.68
POLR1BQ9H9Y6 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC4.55□□□□□ -1.68
POLR1BQ9H9Y6 SNORD11.1-201ENST00000459482 85 ntBASIC4.55□□□□□ -1.68
POLR1BQ9H9Y6 AC011276.1-201ENST00000469688 323 ntBASIC4.55□□□□□ -1.68
POLR1BQ9H9Y6 AC134050.1-201ENST00000495088 933 ntBASIC4.55□□□□□ -1.68
POLR1BQ9H9Y6 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.55□□□□□ -1.68
POLR1BQ9H9Y6 SLC25A15P5-201ENST00000508033 253 ntBASIC4.55□□□□□ -1.68
POLR1BQ9H9Y6 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.55□□□□□ -1.68
POLR1BQ9H9Y6 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC4.55□□□□□ -1.68
POLR1BQ9H9Y6 AC015795.1-201ENST00000513669 327 ntBASIC4.55□□□□□ -1.68
POLR1BQ9H9Y6 RNA5SP135-201ENST00000517019 125 ntBASIC4.55□□□□□ -1.68
POLR1BQ9H9Y6 AF186190.1-201ENST00000517470 480 ntBASIC4.55□□□□□ -1.68
POLR1BQ9H9Y6 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC4.55□□□□□ -1.68
POLR1BQ9H9Y6 AC022790.1-201ENST00000522872 204 ntBASIC4.55□□□□□ -1.68
POLR1BQ9H9Y6 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC4.55□□□□□ -1.68
POLR1BQ9H9Y6 OR4C2P-201ENST00000530855 1064 ntBASIC4.55□□□□□ -1.68
POLR1BQ9H9Y6 PDCD5P1-201ENST00000543528 309 ntBASIC4.55□□□□□ -1.68
POLR1BQ9H9Y6 MTND1P24-201ENST00000552175 861 ntBASIC4.55□□□□□ -1.68
POLR1BQ9H9Y6 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.55□□□□□ -1.68
POLR1BQ9H9Y6 AC087477.6-201ENST00000559595 843 ntBASIC4.55□□□□□ -1.68
POLR1BQ9H9Y6 AC084783.1-201ENST00000565846 910 ntBASIC4.55□□□□□ -1.68
POLR1BQ9H9Y6 MIR5699-201ENST00000578903 90 ntBASIC4.55□□□□□ -1.68
POLR1BQ9H9Y6 AC011477.5-201ENST00000586571 259 ntBASIC4.55□□□□□ -1.68
POLR1BQ9H9Y6 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.55□□□□□ -1.68
POLR1BQ9H9Y6 MIR6864-201ENST00000617935 70 ntBASIC4.55□□□□□ -1.68
POLR1BQ9H9Y6 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC4.55□□□□□ -1.68
POLR1BQ9H9Y6 AC124312.6-202ENST00000623624 418 ntBASIC4.55□□□□□ -1.68
POLR1BQ9H9Y6 BMS1P21-201ENST00000634565 365 ntBASIC4.55□□□□□ -1.68
POLR1BQ9H9Y6 ZNF663P-202ENST00000641770 1131 ntBASIC4.55□□□□□ -1.68
POLR1BQ9H9Y6 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
POLR1BQ9H9Y6 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
POLR1BQ9H9Y6 AC027290.2-201ENST00000623210 18662 ntBASIC4.55□□□□□ -1.68
POLR1BQ9H9Y6 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.55□□□□□ -1.68
POLR1BQ9H9Y6 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.55□□□□□ -1.68
POLR1BQ9H9Y6 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.55□□□□□ -1.68
POLR1BQ9H9Y6 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.55□□□□□ -1.68
POLR1BQ9H9Y6 AC009643.2-201ENST00000603543 1448 ntBASIC4.55□□□□□ -1.68
POLR1BQ9H9Y6 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.54□□□□□ -1.68
POLR1BQ9H9Y6 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
POLR1BQ9H9Y6 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
POLR1BQ9H9Y6 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
POLR1BQ9H9Y6 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.54□□□□□ -1.68
POLR1BQ9H9Y6 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
POLR1BQ9H9Y6 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
POLR1BQ9H9Y6 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.54□□□□□ -1.68
POLR1BQ9H9Y6 AC004022.2-201ENST00000413824 193 ntBASIC4.54□□□□□ -1.68
POLR1BQ9H9Y6 LINC00993-201ENST00000420453 540 ntBASIC4.54□□□□□ -1.68
POLR1BQ9H9Y6 OR2X1P-201ENST00000421144 687 ntBASIC4.54□□□□□ -1.68
POLR1BQ9H9Y6 OFD1P2Y-201ENST00000421895 1149 ntBASIC4.54□□□□□ -1.68
POLR1BQ9H9Y6 MTCO2P17-201ENST00000424336 677 ntBASIC4.54□□□□□ -1.68
POLR1BQ9H9Y6 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.54□□□□□ -1.68
POLR1BQ9H9Y6 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.54□□□□□ -1.68
POLR1BQ9H9Y6 BLOC1S2P1-201ENST00000428431 301 ntBASIC4.54□□□□□ -1.68
POLR1BQ9H9Y6 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.54□□□□□ -1.68
POLR1BQ9H9Y6 KCTD10P1-201ENST00000434203 625 ntBASIC4.54□□□□□ -1.68
POLR1BQ9H9Y6 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC4.54□□□□□ -1.68
POLR1BQ9H9Y6 VN1R25P-201ENST00000443385 738 ntBASIC4.54□□□□□ -1.68
POLR1BQ9H9Y6 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC4.54□□□□□ -1.68
POLR1BQ9H9Y6 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.54□□□□□ -1.68
POLR1BQ9H9Y6 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.54□□□□□ -1.68
POLR1BQ9H9Y6 HMGB3P21-201ENST00000452483 547 ntBASIC4.54□□□□□ -1.68
POLR1BQ9H9Y6 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.54□□□□□ -1.68
POLR1BQ9H9Y6 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.54□□□□□ -1.68
POLR1BQ9H9Y6 RPL23AP44-201ENST00000482216 473 ntBASIC4.54□□□□□ -1.68
POLR1BQ9H9Y6 AC025674.1-201ENST00000507074 324 ntBASIC4.54□□□□□ -1.68
POLR1BQ9H9Y6 AC091868.1-201ENST00000508746 304 ntBASIC4.54□□□□□ -1.68
POLR1BQ9H9Y6 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.54□□□□□ -1.68
POLR1BQ9H9Y6 AC113347.3-201ENST00000509113 148 ntBASIC4.54□□□□□ -1.68
POLR1BQ9H9Y6 Y_RNA.719-201ENST00000517156 106 ntBASIC4.54□□□□□ -1.68
POLR1BQ9H9Y6 SOD1P3-201ENST00000518682 454 ntBASIC4.54□□□□□ -1.68
POLR1BQ9H9Y6 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
POLR1BQ9H9Y6 AP001317.1-201ENST00000531194 960 ntBASIC4.54□□□□□ -1.68
POLR1BQ9H9Y6 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC4.54□□□□□ -1.68
POLR1BQ9H9Y6 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC4.54□□□□□ -1.68
POLR1BQ9H9Y6 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.54□□□□□ -1.68
POLR1BQ9H9Y6 RN7SL652P-201ENST00000577769 300 ntBASIC4.54□□□□□ -1.68
POLR1BQ9H9Y6 MIR5708-201ENST00000579723 85 ntBASIC4.54□□□□□ -1.68
POLR1BQ9H9Y6 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC4.54□□□□□ -1.68
POLR1BQ9H9Y6 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.54□□□□□ -1.68
POLR1BQ9H9Y6 SNORA74C-1-201ENST00000580726 201 ntBASIC4.54□□□□□ -1.68
POLR1BQ9H9Y6 MIR3939-201ENST00000582614 106 ntBASIC4.54□□□□□ -1.68
POLR1BQ9H9Y6 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.54□□□□□ -1.68
POLR1BQ9H9Y6 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms