Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC6.36□□□□□ -1.39
COL25A1Q9BXS0 ABCB5-205ENST00000443026 2247 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
COL25A1Q9BXS0 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
COL25A1Q9BXS0 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
COL25A1Q9BXS0 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
COL25A1Q9BXS0 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL25A1Q9BXS0 ZNF845-202ENST00000595091 4413 ntAPPRIS P1 TSL 4 BASIC6.35□□□□□ -1.39
COL25A1Q9BXS0 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
COL25A1Q9BXS0 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC6.35□□□□□ -1.39
COL25A1Q9BXS0 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL25A1Q9BXS0 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL25A1Q9BXS0 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
COL25A1Q9BXS0 AC233263.6-201ENST00000631132 1963 ntBASIC6.35□□□□□ -1.39
COL25A1Q9BXS0 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
COL25A1Q9BXS0 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL25A1Q9BXS0 BEST3-205ENST00000488961 2878 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
COL25A1Q9BXS0 MELK-207ENST00000536860 2342 ntTSL 2 BASIC6.35□□□□□ -1.39
COL25A1Q9BXS0 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL25A1Q9BXS0 RNA5SP305-201ENST00000362665 119 ntBASIC6.35□□□□□ -1.39
COL25A1Q9BXS0 RNU4-66P-201ENST00000365199 138 ntBASIC6.35□□□□□ -1.39
COL25A1Q9BXS0 MIR23B-201ENST00000384832 97 ntBASIC6.35□□□□□ -1.39
COL25A1Q9BXS0 MIR506-201ENST00000384998 124 ntBASIC6.35□□□□□ -1.39
COL25A1Q9BXS0 RNU6-244P-201ENST00000391028 104 ntBASIC6.35□□□□□ -1.39
COL25A1Q9BXS0 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC6.35□□□□□ -1.39
COL25A1Q9BXS0 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC6.35□□□□□ -1.39
COL25A1Q9BXS0 RSL24D1P6-201ENST00000426934 401 ntBASIC6.35□□□□□ -1.39
COL25A1Q9BXS0 RPL7L1P9-201ENST00000431298 745 ntBASIC6.35□□□□□ -1.39
COL25A1Q9BXS0 DYNLT3P2-201ENST00000442517 295 ntBASIC6.35□□□□□ -1.39
COL25A1Q9BXS0 TRAPPC2P3-201ENST00000443200 321 ntBASIC6.35□□□□□ -1.39
COL25A1Q9BXS0 AC011742.2-201ENST00000443818 352 ntBASIC6.35□□□□□ -1.39
COL25A1Q9BXS0 SLC25A18P1-201ENST00000449385 454 ntBASIC6.35□□□□□ -1.39
COL25A1Q9BXS0 RPL37P3-201ENST00000456825 293 ntBASIC6.35□□□□□ -1.39
COL25A1Q9BXS0 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC6.35□□□□□ -1.39
COL25A1Q9BXS0 RPS27P27-201ENST00000498779 255 ntBASIC6.35□□□□□ -1.39
COL25A1Q9BXS0 AC004062.1-201ENST00000509926 645 ntBASIC6.35□□□□□ -1.39
COL25A1Q9BXS0 Y_RNA.700-201ENST00000516806 100 ntBASIC6.35□□□□□ -1.39
COL25A1Q9BXS0 MYL12AP1-201ENST00000518490 515 ntBASIC6.35□□□□□ -1.39
COL25A1Q9BXS0 AC100784.1-201ENST00000522790 310 ntBASIC6.35□□□□□ -1.39
COL25A1Q9BXS0 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
COL25A1Q9BXS0 AC022182.1-202ENST00000529234 580 ntTSL 2 BASIC6.35□□□□□ -1.39
COL25A1Q9BXS0 AP003385.6-201ENST00000531603 374 ntBASIC6.35□□□□□ -1.39
COL25A1Q9BXS0 GNAI2P1-201ENST00000541815 315 ntBASIC6.35□□□□□ -1.39
COL25A1Q9BXS0 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC6.35□□□□□ -1.39
COL25A1Q9BXS0 AC040162.2-201ENST00000573092 157 ntBASIC6.35□□□□□ -1.39
COL25A1Q9BXS0 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC6.35□□□□□ -1.39
COL25A1Q9BXS0 MIR3118-1-201ENST00000581787 76 ntBASIC6.35□□□□□ -1.39
COL25A1Q9BXS0 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC6.35□□□□□ -1.39
COL25A1Q9BXS0 AC125232.2-201ENST00000592457 143 ntBASIC6.35□□□□□ -1.39
COL25A1Q9BXS0 AC078899.3-201ENST00000599065 212 ntBASIC6.35□□□□□ -1.39
COL25A1Q9BXS0 AL355297.3-201ENST00000604082 446 ntBASIC6.35□□□□□ -1.39
COL25A1Q9BXS0 OR10AB1P-201ENST00000609613 938 ntBASIC6.35□□□□□ -1.39
COL25A1Q9BXS0 AC243773.3-201ENST00000613270 256 ntBASIC6.35□□□□□ -1.39
COL25A1Q9BXS0 MIR6758-201ENST00000620653 63 ntBASIC6.35□□□□□ -1.39
COL25A1Q9BXS0 AL669831.3-213ENST00000636676 183 ntBASIC6.35□□□□□ -1.39
COL25A1Q9BXS0 LGI1-211ENST00000630047 1751 ntTSL 2 BASIC6.35□□□□□ -1.39
COL25A1Q9BXS0 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC6.35□□□□□ -1.39
COL25A1Q9BXS0 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL25A1Q9BXS0 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL25A1Q9BXS0 BBOX1-204ENST00000528583 1724 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL25A1Q9BXS0 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL25A1Q9BXS0 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
COL25A1Q9BXS0 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL25A1Q9BXS0 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
COL25A1Q9BXS0 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL25A1Q9BXS0 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL25A1Q9BXS0 IL1B-201ENST00000263341 1631 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL25A1Q9BXS0 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL25A1Q9BXS0 ADAMTS9-AS2-202ENST00000474768 2388 ntTSL 2 BASIC6.35□□□□□ -1.39
COL25A1Q9BXS0 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC6.35□□□□□ -1.39
COL25A1Q9BXS0 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
COL25A1Q9BXS0 VLDLR-AS1-201ENST00000416826 3167 ntTSL 2 BASIC6.34□□□□□ -1.39
COL25A1Q9BXS0 AP001157.1-201ENST00000550837 2339 ntBASIC6.34□□□□□ -1.39
COL25A1Q9BXS0 ZNF182-202ENST00000396965 3586 ntAPPRIS P4 TSL 2 BASIC6.34□□□□□ -1.39
COL25A1Q9BXS0 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC6.34□□□□□ -1.39
COL25A1Q9BXS0 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
COL25A1Q9BXS0 KPNA1-201ENST00000344337 6830 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
COL25A1Q9BXS0 PCDH15-226ENST00000613657 6329 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
COL25A1Q9BXS0 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.34□□□□□ -1.39
COL25A1Q9BXS0 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC6.34□□□□□ -1.39
COL25A1Q9BXS0 TTLL5-207ENST00000554510 2624 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
COL25A1Q9BXS0 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
COL25A1Q9BXS0 ESRP1-201ENST00000358397 3756 ntAPPRIS ALT1 TSL 1 (best) BASIC6.34□□□□□ -1.39
COL25A1Q9BXS0 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
COL25A1Q9BXS0 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.34□□□□□ -1.39
COL25A1Q9BXS0 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
COL25A1Q9BXS0 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
COL25A1Q9BXS0 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
COL25A1Q9BXS0 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
COL25A1Q9BXS0 SNORA75B-201ENST00000384053 137 ntBASIC6.34□□□□□ -1.39
COL25A1Q9BXS0 RNU6-890P-201ENST00000384121 107 ntBASIC6.34□□□□□ -1.39
COL25A1Q9BXS0 Y_RNA.461-201ENST00000384263 103 ntBASIC6.34□□□□□ -1.39
COL25A1Q9BXS0 Y_RNA.493-201ENST00000384422 102 ntBASIC6.34□□□□□ -1.39
COL25A1Q9BXS0 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
COL25A1Q9BXS0 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC6.34□□□□□ -1.39
COL25A1Q9BXS0 TEX41-206ENST00000432608 661 ntTSL 3 BASIC6.34□□□□□ -1.39
COL25A1Q9BXS0 YWHAZP8-201ENST00000436935 731 ntBASIC6.34□□□□□ -1.39
COL25A1Q9BXS0 IGKV1OR10-1-201ENST00000442306 329 ntBASIC6.34□□□□□ -1.39
COL25A1Q9BXS0 OSTCP8-201ENST00000445117 448 ntBASIC6.34□□□□□ -1.39
COL25A1Q9BXS0 AC079781.2-201ENST00000446424 169 ntBASIC6.34□□□□□ -1.39
COL25A1Q9BXS0 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms