Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC5.05□□□□□ -1.6
SMOQ99835 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.05□□□□□ -1.6
SMOQ99835 AC104685.1-201ENST00000502445 371 ntBASIC5.05□□□□□ -1.6
SMOQ99835 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SMOQ99835 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SMOQ99835 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC5.05□□□□□ -1.6
SMOQ99835 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC5.05□□□□□ -1.6
SMOQ99835 COX6B1P6-201ENST00000522347 255 ntBASIC5.05□□□□□ -1.6
SMOQ99835 SMARCE1P4-201ENST00000523647 241 ntBASIC5.05□□□□□ -1.6
SMOQ99835 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.05□□□□□ -1.6
SMOQ99835 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC5.05□□□□□ -1.6
SMOQ99835 AC122134.1-201ENST00000565664 1104 ntBASIC5.05□□□□□ -1.6
SMOQ99835 AC087283.1-201ENST00000604029 1074 ntBASIC5.05□□□□□ -1.6
SMOQ99835 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.05□□□□□ -1.6
SMOQ99835 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC5.05□□□□□ -1.6
SMOQ99835 AC005962.2-201ENST00000611427 652 ntBASIC5.05□□□□□ -1.6
SMOQ99835 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SMOQ99835 AL031667.3-201ENST00000620124 655 ntBASIC5.05□□□□□ -1.6
SMOQ99835 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.05□□□□□ -1.6
SMOQ99835 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC5.05□□□□□ -1.6
SMOQ99835 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.05□□□□□ -1.6
SMOQ99835 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
SMOQ99835 AL353743.4-201ENST00000422653 1547 ntBASIC5.05□□□□□ -1.6
SMOQ99835 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
SMOQ99835 AL603750.1-201ENST00000624216 1717 ntBASIC5.05□□□□□ -1.6
SMOQ99835 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SMOQ99835 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SMOQ99835 TANK-205ENST00000405852 2155 ntTSL 5 BASIC5.05□□□□□ -1.6
SMOQ99835 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.05□□□□□ -1.6
SMOQ99835 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC5.05□□□□□ -1.6
SMOQ99835 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.04□□□□□ -1.6
SMOQ99835 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.04□□□□□ -1.6
SMOQ99835 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
SMOQ99835 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
SMOQ99835 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.04□□□□□ -1.6
SMOQ99835 SOCS5P3-201ENST00000425115 1576 ntBASIC5.04□□□□□ -1.6
SMOQ99835 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SMOQ99835 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.04□□□□□ -1.6
SMOQ99835 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SMOQ99835 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SMOQ99835 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SMOQ99835 RNU4-21P-201ENST00000362802 126 ntBASIC5.04□□□□□ -1.6
SMOQ99835 U3.4-201ENST00000363352 213 ntBASIC5.04□□□□□ -1.6
SMOQ99835 RNU6-1066P-201ENST00000363573 105 ntBASIC5.04□□□□□ -1.6
SMOQ99835 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
SMOQ99835 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SMOQ99835 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SMOQ99835 RNU1-82P-201ENST00000390851 165 ntBASIC5.04□□□□□ -1.6
SMOQ99835 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
SMOQ99835 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SMOQ99835 FABP7P1-201ENST00000424004 391 ntBASIC5.04□□□□□ -1.6
SMOQ99835 RPS3AP44-201ENST00000425466 790 ntBASIC5.04□□□□□ -1.6
SMOQ99835 CENPIP1-201ENST00000425713 902 ntBASIC5.04□□□□□ -1.6
SMOQ99835 MTCO3P30-201ENST00000426425 670 ntBASIC5.04□□□□□ -1.6
SMOQ99835 MTCO3P21-201ENST00000430791 643 ntBASIC5.04□□□□□ -1.6
SMOQ99835 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
SMOQ99835 AL031663.1-201ENST00000437445 219 ntBASIC5.04□□□□□ -1.6
SMOQ99835 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC5.04□□□□□ -1.6
SMOQ99835 KATNBL1P6-201ENST00000453433 915 ntBASIC5.04□□□□□ -1.6
SMOQ99835 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC5.04□□□□□ -1.6
SMOQ99835 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC5.04□□□□□ -1.6
SMOQ99835 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
SMOQ99835 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.04□□□□□ -1.6
SMOQ99835 AC109486.1-201ENST00000486833 374 ntBASIC5.04□□□□□ -1.6
SMOQ99835 AC007686.1-201ENST00000488511 463 ntBASIC5.04□□□□□ -1.6
SMOQ99835 RPS23P1-201ENST00000491662 432 ntBASIC5.04□□□□□ -1.6
SMOQ99835 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC5.04□□□□□ -1.6
SMOQ99835 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
SMOQ99835 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.04□□□□□ -1.6
SMOQ99835 RNU2-30P-201ENST00000516209 141 ntBASIC5.04□□□□□ -1.6
SMOQ99835 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.04□□□□□ -1.6
SMOQ99835 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.04□□□□□ -1.6
SMOQ99835 AL359219.2-201ENST00000555184 348 ntBASIC5.04□□□□□ -1.6
SMOQ99835 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC5.04□□□□□ -1.6
SMOQ99835 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.04□□□□□ -1.6
SMOQ99835 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC5.04□□□□□ -1.6
SMOQ99835 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.04□□□□□ -1.6
SMOQ99835 U73023.1-201ENST00000603134 700 ntBASIC5.04□□□□□ -1.6
SMOQ99835 AL139286.2-201ENST00000606838 396 ntBASIC5.04□□□□□ -1.6
SMOQ99835 AL391497.1-201ENST00000608671 547 ntBASIC5.04□□□□□ -1.6
SMOQ99835 AL161616.1-201ENST00000611867 286 ntBASIC5.04□□□□□ -1.6
SMOQ99835 AC009878.1-201ENST00000621819 340 ntBASIC5.04□□□□□ -1.6
SMOQ99835 AC012414.7-202ENST00000622705 1090 ntBASIC5.04□□□□□ -1.6
SMOQ99835 AC124312.6-202ENST00000623624 418 ntBASIC5.04□□□□□ -1.6
SMOQ99835 AL392088.2-201ENST00000637607 285 ntBASIC5.04□□□□□ -1.6
SMOQ99835 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SMOQ99835 AL442639.1-201ENST00000625030 1899 ntBASIC5.04□□□□□ -1.6
SMOQ99835 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.04□□□□□ -1.6
SMOQ99835 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SMOQ99835 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.04□□□□□ -1.6
SMOQ99835 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.04□□□□□ -1.6
SMOQ99835 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.04□□□□□ -1.6
SMOQ99835 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SMOQ99835 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
SMOQ99835 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SMOQ99835 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
SMOQ99835 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.04□□□□□ -1.6
SMOQ99835 AC027228.2-201ENST00000567141 2154 ntBASIC5.04□□□□□ -1.6
SMOQ99835 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
SMOQ99835 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms