Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
ABCA3Q99758 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.59□□□□□ -1.68
ABCA3Q99758 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.58□□□□□ -1.68
ABCA3Q99758 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
ABCA3Q99758 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
ABCA3Q99758 MTHFD2P2-201ENST00000407725 247 ntBASIC4.58□□□□□ -1.68
ABCA3Q99758 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC4.58□□□□□ -1.68
ABCA3Q99758 EIF4EP1-201ENST00000422311 642 ntBASIC4.58□□□□□ -1.68
ABCA3Q99758 AL513175.1-201ENST00000431492 780 ntBASIC4.58□□□□□ -1.68
ABCA3Q99758 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.58□□□□□ -1.68
ABCA3Q99758 AC139783.2-201ENST00000504847 1145 ntBASIC4.58□□□□□ -1.68
ABCA3Q99758 EIF1P6-201ENST00000600054 334 ntBASIC4.58□□□□□ -1.68
ABCA3Q99758 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
ABCA3Q99758 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
ABCA3Q99758 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
ABCA3Q99758 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
ABCA3Q99758 RNU1-70P-201ENST00000362618 164 ntBASIC4.58□□□□□ -1.68
ABCA3Q99758 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC4.58□□□□□ -1.68
ABCA3Q99758 AC084357.1-201ENST00000473404 255 ntBASIC4.58□□□□□ -1.68
ABCA3Q99758 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC4.58□□□□□ -1.68
ABCA3Q99758 AL133457.1-201ENST00000564251 987 ntBASIC4.58□□□□□ -1.68
ABCA3Q99758 AL353600.1-201ENST00000608148 251 ntBASIC4.58□□□□□ -1.68
ABCA3Q99758 AC022149.2-201ENST00000621061 203 ntBASIC4.58□□□□□ -1.68
ABCA3Q99758 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.57□□□□□ -1.68
ABCA3Q99758 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
ABCA3Q99758 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
ABCA3Q99758 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
ABCA3Q99758 HSPA8P17-201ENST00000427029 1382 ntBASIC4.57□□□□□ -1.68
ABCA3Q99758 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
ABCA3Q99758 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
ABCA3Q99758 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.57□□□□□ -1.68
ABCA3Q99758 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
ABCA3Q99758 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
ABCA3Q99758 AC062016.1-201ENST00000355719 319 ntBASIC4.57□□□□□ -1.68
ABCA3Q99758 AL024507.1-201ENST00000412741 274 ntBASIC4.57□□□□□ -1.68
ABCA3Q99758 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.57□□□□□ -1.68
ABCA3Q99758 PTP4A1P3-201ENST00000433661 420 ntBASIC4.57□□□□□ -1.68
ABCA3Q99758 AC092809.1-201ENST00000441469 474 ntBASIC4.57□□□□□ -1.68
ABCA3Q99758 NPM1P39-201ENST00000449818 867 ntBASIC4.57□□□□□ -1.68
ABCA3Q99758 AC110794.1-201ENST00000505816 425 ntBASIC4.57□□□□□ -1.68
ABCA3Q99758 AC091826.1-201ENST00000514065 313 ntBASIC4.57□□□□□ -1.68
ABCA3Q99758 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.57□□□□□ -1.68
ABCA3Q99758 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.57□□□□□ -1.68
ABCA3Q99758 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC4.57□□□□□ -1.68
ABCA3Q99758 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
ABCA3Q99758 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.57□□□□□ -1.68
ABCA3Q99758 RUFY2-201ENST00000265865 2033 ntTSL 2 BASIC4.57□□□□□ -1.68
ABCA3Q99758 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
ABCA3Q99758 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
ABCA3Q99758 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
ABCA3Q99758 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
ABCA3Q99758 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.56□□□□□ -1.68
ABCA3Q99758 ELOCP8-201ENST00000439309 332 ntBASIC4.56□□□□□ -1.68
ABCA3Q99758 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.56□□□□□ -1.68
ABCA3Q99758 ELOCP15-201ENST00000442090 332 ntBASIC4.56□□□□□ -1.68
ABCA3Q99758 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.56□□□□□ -1.68
ABCA3Q99758 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC4.56□□□□□ -1.68
ABCA3Q99758 AC073869.7-201ENST00000640874 297 ntBASIC4.56□□□□□ -1.68
ABCA3Q99758 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
ABCA3Q99758 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
ABCA3Q99758 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
ABCA3Q99758 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
ABCA3Q99758 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
ABCA3Q99758 HSPA8P19-201ENST00000505359 1517 ntBASIC4.55□□□□□ -1.68
ABCA3Q99758 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
ABCA3Q99758 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
ABCA3Q99758 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
ABCA3Q99758 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.55□□□□□ -1.68
ABCA3Q99758 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.55□□□□□ -1.68
ABCA3Q99758 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.55□□□□□ -1.68
ABCA3Q99758 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC4.55□□□□□ -1.68
ABCA3Q99758 RN7SL594P-201ENST00000470590 287 ntBASIC4.55□□□□□ -1.68
ABCA3Q99758 AC113192.3-201ENST00000529152 742 ntBASIC4.55□□□□□ -1.68
ABCA3Q99758 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.55□□□□□ -1.68
ABCA3Q99758 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.55□□□□□ -1.68
ABCA3Q99758 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC4.55□□□□□ -1.68
ABCA3Q99758 SNORD39.4-201ENST00000620099 78 ntBASIC4.55□□□□□ -1.68
ABCA3Q99758 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC4.55□□□□□ -1.68
ABCA3Q99758 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.55□□□□□ -1.68
ABCA3Q99758 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
ABCA3Q99758 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
ABCA3Q99758 ZNF90P1-201ENST00000480493 1951 ntBASIC4.55□□□□□ -1.68
ABCA3Q99758 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
ABCA3Q99758 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
ABCA3Q99758 SNORA48.8-201ENST00000391324 134 ntBASIC4.55□□□□□ -1.68
ABCA3Q99758 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.55□□□□□ -1.68
ABCA3Q99758 RPS29P26-201ENST00000477483 171 ntBASIC4.55□□□□□ -1.68
ABCA3Q99758 AC008885.1-201ENST00000514930 301 ntBASIC4.55□□□□□ -1.68
ABCA3Q99758 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.55□□□□□ -1.68
ABCA3Q99758 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC4.55□□□□□ -1.68
ABCA3Q99758 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC4.55□□□□□ -1.68
ABCA3Q99758 MIR7106-201ENST00000612419 65 ntBASIC4.55□□□□□ -1.68
ABCA3Q99758 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.55□□□□□ -1.68
ABCA3Q99758 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.54□□□□□ -1.68
ABCA3Q99758 MUC2-202ENST00000613187 4845 ntBASIC4.54□□□□□ -1.68
ABCA3Q99758 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
ABCA3Q99758 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC4.54□□□□□ -1.68
ABCA3Q99758 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.54□□□□□ -1.68
ABCA3Q99758 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC4.54□□□□□ -1.68
ABCA3Q99758 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms