Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 AC245100.2-201ENST00000454544 1679 ntBASIC1.66□□□□□ -2.14
HMCN1Q96RW7 CCNT1-201ENST00000261900 6973 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 SVEP1-203ENST00000401783 12350 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 FNDC3A-204ENST00000492622 6286 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 POT1-201ENST00000357628 4080 ntAPPRIS P1 TSL 2 BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 DOCK4-204ENST00000428084 7997 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 GOLGA6L6-201ENST00000619213 4013 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 GPR158-201ENST00000376351 6959 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 SPATA31B1P-201ENST00000434692 4016 ntBASIC1.66□□□□□ -2.14
HMCN1Q96RW7 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 OR6K3-202ENST00000368146 996 ntBASIC1.66□□□□□ -2.14
HMCN1Q96RW7 RNU6-628P-201ENST00000410675 107 ntBASIC1.66□□□□□ -2.14
HMCN1Q96RW7 CHEK2P3-201ENST00000416118 248 ntBASIC1.66□□□□□ -2.14
HMCN1Q96RW7 NMD3P2-201ENST00000421815 761 ntBASIC1.66□□□□□ -2.14
HMCN1Q96RW7 MTCYBP5-201ENST00000423752 1135 ntBASIC1.66□□□□□ -2.14
HMCN1Q96RW7 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 NOP56P2-201ENST00000447491 769 ntBASIC1.66□□□□□ -2.14
HMCN1Q96RW7 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 RPS17P2-201ENST00000461663 408 ntBASIC1.66□□□□□ -2.14
HMCN1Q96RW7 AC117395.1-201ENST00000487390 403 ntBASIC1.66□□□□□ -2.14
HMCN1Q96RW7 MTCYBP17-201ENST00000503579 789 ntBASIC1.66□□□□□ -2.14
HMCN1Q96RW7 CSNK1A1P3-201ENST00000504105 330 ntBASIC1.66□□□□□ -2.14
HMCN1Q96RW7 PRDX4P1-201ENST00000507189 574 ntBASIC1.66□□□□□ -2.14
HMCN1Q96RW7 AC010343.2-201ENST00000510162 224 ntBASIC1.66□□□□□ -2.14
HMCN1Q96RW7 RNU2-10P-201ENST00000516375 211 ntBASIC1.66□□□□□ -2.14
HMCN1Q96RW7 MIR2117-201ENST00000516780 80 ntBASIC1.66□□□□□ -2.14
HMCN1Q96RW7 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 MTCO1P40-201ENST00000574371 625 ntBASIC1.66□□□□□ -2.14
HMCN1Q96RW7 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 AL390816.3-201ENST00000604527 1066 ntBASIC1.66□□□□□ -2.14
HMCN1Q96RW7 AC090948.2-201ENST00000607363 564 ntBASIC1.66□□□□□ -2.14
HMCN1Q96RW7 AP005432.2-201ENST00000608162 586 ntBASIC1.66□□□□□ -2.14
HMCN1Q96RW7 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 AC005344.1-201ENST00000613391 459 ntBASIC1.66□□□□□ -2.14
HMCN1Q96RW7 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 OR5H6-203ENST00000642105 978 ntBASIC1.66□□□□□ -2.14
HMCN1Q96RW7 CHD3-201ENST00000330494 7328 ntAPPRIS P4 TSL 1 (best) BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 BTAF1-201ENST00000265990 7250 ntAPPRIS P2 TSL 1 (best) BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 ERG-201ENST00000288319 4919 ntAPPRIS P3 TSL 1 (best) BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 TRPM8-204ENST00000433712 5291 ntTSL 5 BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 GRIP2-205ENST00000621039 7752 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 CTDSPL2-201ENST00000260327 6828 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 AC026523.2-201ENST00000625039 7739 ntBASIC1.66□□□□□ -2.14
HMCN1Q96RW7 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 TG-201ENST00000220616 8450 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 SEMA5A-201ENST00000382496 11762 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 CD34-201ENST00000310833 8246 ntAPPRIS P2 TSL 1 (best) BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 RNU6-753P-201ENST00000363926 107 ntBASIC1.66□□□□□ -2.14
HMCN1Q96RW7 RNU6-151P-201ENST00000364158 107 ntBASIC1.66□□□□□ -2.14
HMCN1Q96RW7 RNA5SP22-201ENST00000365393 109 ntBASIC1.66□□□□□ -2.14
HMCN1Q96RW7 RNU6-744P-201ENST00000365557 107 ntBASIC1.66□□□□□ -2.14
HMCN1Q96RW7 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 MIR218-2-201ENST00000385006 110 ntBASIC1.66□□□□□ -2.14
HMCN1Q96RW7 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 AC104978.1-201ENST00000449387 391 ntBASIC1.66□□□□□ -2.14
HMCN1Q96RW7 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 RPS20P24-201ENST00000457473 361 ntBASIC1.66□□□□□ -2.14
HMCN1Q96RW7 RPL21P8-201ENST00000465083 535 ntBASIC1.66□□□□□ -2.14
HMCN1Q96RW7 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC1.66□□□□□ -2.14
HMCN1Q96RW7 AC021678.1-201ENST00000505195 936 ntBASIC1.66□□□□□ -2.14
HMCN1Q96RW7 RNA5SP43-201ENST00000516559 110 ntBASIC1.66□□□□□ -2.14
HMCN1Q96RW7 OR56A7P-201ENST00000524865 941 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms