Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 ELOCP8-201ENST00000439309 332 ntBASIC5.7□□□□□ -1.5
TOPBP1Q92547 ELOCP15-201ENST00000442090 332 ntBASIC5.7□□□□□ -1.5
TOPBP1Q92547 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC5.7□□□□□ -1.5
TOPBP1Q92547 MORF4L2P1-201ENST00000503761 858 ntBASIC5.7□□□□□ -1.5
TOPBP1Q92547 AC135001.1-201ENST00000544546 283 ntBASIC5.7□□□□□ -1.5
TOPBP1Q92547 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC5.7□□□□□ -1.5
TOPBP1Q92547 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC5.7□□□□□ -1.5
TOPBP1Q92547 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC5.7□□□□□ -1.5
TOPBP1Q92547 AC105227.2-201ENST00000615075 605 ntBASIC5.7□□□□□ -1.5
TOPBP1Q92547 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TOPBP1Q92547 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.7□□□□□ -1.5
TOPBP1Q92547 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TOPBP1Q92547 AC027290.2-201ENST00000623210 18662 ntBASIC5.7□□□□□ -1.5
TOPBP1Q92547 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.7□□□□□ -1.5
TOPBP1Q92547 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
TOPBP1Q92547 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.7□□□□□ -1.5
TOPBP1Q92547 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TOPBP1Q92547 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
TOPBP1Q92547 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.7□□□□□ -1.5
TOPBP1Q92547 NMD3P1-201ENST00000439704 1488 ntBASIC5.69□□□□□ -1.5
TOPBP1Q92547 AL138885.1-201ENST00000405921 675 ntBASIC5.69□□□□□ -1.5
TOPBP1Q92547 RNA5SP146-201ENST00000410743 123 ntBASIC5.69□□□□□ -1.5
TOPBP1Q92547 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TOPBP1Q92547 ATP5C1P1-201ENST00000441945 895 ntBASIC5.69□□□□□ -1.5
TOPBP1Q92547 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC5.69□□□□□ -1.5
TOPBP1Q92547 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.69□□□□□ -1.5
TOPBP1Q92547 MIR3162-201ENST00000581818 82 ntBASIC5.69□□□□□ -1.5
TOPBP1Q92547 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC5.69□□□□□ -1.5
TOPBP1Q92547 AL732372.2-225ENST00000642124 456 ntBASIC5.69□□□□□ -1.5
TOPBP1Q92547 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
TOPBP1Q92547 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TOPBP1Q92547 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TOPBP1Q92547 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TOPBP1Q92547 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TOPBP1Q92547 RUFY2-201ENST00000265865 2033 ntTSL 2 BASIC5.69□□□□□ -1.5
TOPBP1Q92547 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC5.69□□□□□ -1.5
TOPBP1Q92547 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TOPBP1Q92547 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC5.69□□□□□ -1.5
TOPBP1Q92547 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TOPBP1Q92547 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC5.69□□□□□ -1.5
TOPBP1Q92547 SNORA5B-201ENST00000363786 132 ntBASIC5.69□□□□□ -1.5
TOPBP1Q92547 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC5.69□□□□□ -1.5
TOPBP1Q92547 CCDC75P1-201ENST00000469247 791 ntBASIC5.69□□□□□ -1.5
TOPBP1Q92547 AC027309.2-201ENST00000520566 192 ntBASIC5.69□□□□□ -1.5
TOPBP1Q92547 AL049840.6-202ENST00000603373 279 ntBASIC5.69□□□□□ -1.5
TOPBP1Q92547 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TOPBP1Q92547 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC5.68□□□□□ -1.5
TOPBP1Q92547 Z95331.1-201ENST00000623075 23112 ntBASIC5.68□□□□□ -1.5
TOPBP1Q92547 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
TOPBP1Q92547 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
TOPBP1Q92547 OR5H2-201ENST00000355273 945 ntBASIC5.68□□□□□ -1.5
TOPBP1Q92547 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
TOPBP1Q92547 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC5.68□□□□□ -1.5
TOPBP1Q92547 RNA5SP356-201ENST00000515972 94 ntBASIC5.68□□□□□ -1.5
TOPBP1Q92547 OR4R3P-201ENST00000525084 838 ntBASIC5.68□□□□□ -1.5
TOPBP1Q92547 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.68□□□□□ -1.5
TOPBP1Q92547 EIF1P6-201ENST00000600054 334 ntBASIC5.68□□□□□ -1.5
TOPBP1Q92547 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC5.67□□□□□ -1.5
TOPBP1Q92547 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
TOPBP1Q92547 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TOPBP1Q92547 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TOPBP1Q92547 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TOPBP1Q92547 AC010266.2-201ENST00000564741 3255 ntBASIC5.67□□□□□ -1.5
TOPBP1Q92547 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
TOPBP1Q92547 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TOPBP1Q92547 MIR449A-201ENST00000362113 91 ntBASIC5.67□□□□□ -1.5
TOPBP1Q92547 RNU6-7-201ENST00000364784 107 ntBASIC5.67□□□□□ -1.5
TOPBP1Q92547 RNU6-8-201ENST00000365467 107 ntBASIC5.67□□□□□ -1.5
TOPBP1Q92547 OR6K4P-201ENST00000423179 955 ntBASIC5.67□□□□□ -1.5
TOPBP1Q92547 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC5.67□□□□□ -1.5
TOPBP1Q92547 SETP4-201ENST00000455717 868 ntBASIC5.67□□□□□ -1.5
TOPBP1Q92547 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC5.67□□□□□ -1.5
TOPBP1Q92547 AC008489.1-201ENST00000524271 483 ntBASIC5.67□□□□□ -1.5
TOPBP1Q92547 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.67□□□□□ -1.5
TOPBP1Q92547 IGHV3-29-201ENST00000604817 344 ntBASIC5.67□□□□□ -1.5
TOPBP1Q92547 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TOPBP1Q92547 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
TOPBP1Q92547 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TOPBP1Q92547 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TOPBP1Q92547 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TOPBP1Q92547 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC5.66□□□□□ -1.5
TOPBP1Q92547 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.66□□□□□ -1.5
TOPBP1Q92547 AC092809.1-201ENST00000441469 474 ntBASIC5.66□□□□□ -1.5
TOPBP1Q92547 AC005002.1-201ENST00000447458 540 ntBASIC5.66□□□□□ -1.5
TOPBP1Q92547 MRPL35P4-201ENST00000453682 566 ntBASIC5.66□□□□□ -1.5
TOPBP1Q92547 AC004924.1-201ENST00000480160 781 ntBASIC5.66□□□□□ -1.5
TOPBP1Q92547 AC008885.1-201ENST00000514930 301 ntBASIC5.66□□□□□ -1.5
TOPBP1Q92547 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC5.66□□□□□ -1.5
TOPBP1Q92547 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC5.66□□□□□ -1.5
TOPBP1Q92547 AC006557.5-201ENST00000603126 811 ntBASIC5.66□□□□□ -1.5
TOPBP1Q92547 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TOPBP1Q92547 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TOPBP1Q92547 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TOPBP1Q92547 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC5.66□□□□□ -1.5
TOPBP1Q92547 AC092435.4-201ENST00000623012 4159 ntBASIC5.66□□□□□ -1.5
TOPBP1Q92547 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TOPBP1Q92547 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC5.65□□□□□ -1.5
TOPBP1Q92547 AL513175.1-201ENST00000431492 780 ntBASIC5.65□□□□□ -1.5
TOPBP1Q92547 AL139132.1-201ENST00000431587 344 ntBASIC5.65□□□□□ -1.5
TOPBP1Q92547 AC239809.1-201ENST00000450470 217 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms