Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC4.77□□□□□ -1.65
HMGB4Q8WW32 AC068620.4-201ENST00000636730 1182 ntBASIC4.77□□□□□ -1.65
HMGB4Q8WW32 MKKS-204ENST00000639674 192 ntBASIC4.77□□□□□ -1.65
HMGB4Q8WW32 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HMGB4Q8WW32 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.77□□□□□ -1.65
HMGB4Q8WW32 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HMGB4Q8WW32 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HMGB4Q8WW32 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HMGB4Q8WW32 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HMGB4Q8WW32 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HMGB4Q8WW32 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
HMGB4Q8WW32 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
HMGB4Q8WW32 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HMGB4Q8WW32 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HMGB4Q8WW32 SMG1P4-204ENST00000523028 4131 ntBASIC4.76□□□□□ -1.65
HMGB4Q8WW32 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.76□□□□□ -1.65
HMGB4Q8WW32 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
HMGB4Q8WW32 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.76□□□□□ -1.65
HMGB4Q8WW32 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
HMGB4Q8WW32 OR5H2-201ENST00000355273 945 ntBASIC4.76□□□□□ -1.65
HMGB4Q8WW32 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
HMGB4Q8WW32 RNU6-492P-201ENST00000363035 104 ntBASIC4.76□□□□□ -1.65
HMGB4Q8WW32 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.76□□□□□ -1.65
HMGB4Q8WW32 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HMGB4Q8WW32 MTCO3P31-201ENST00000405526 789 ntBASIC4.76□□□□□ -1.65
HMGB4Q8WW32 RNU6-757P-201ENST00000410334 100 ntBASIC4.76□□□□□ -1.65
HMGB4Q8WW32 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC4.76□□□□□ -1.65
HMGB4Q8WW32 AC013429.2-201ENST00000418798 781 ntBASIC4.76□□□□□ -1.65
HMGB4Q8WW32 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.76□□□□□ -1.65
HMGB4Q8WW32 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.76□□□□□ -1.65
HMGB4Q8WW32 IFNNP1-201ENST00000429219 553 ntBASIC4.76□□□□□ -1.65
HMGB4Q8WW32 AL451139.1-201ENST00000434718 346 ntBASIC4.76□□□□□ -1.65
HMGB4Q8WW32 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.76□□□□□ -1.65
HMGB4Q8WW32 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.76□□□□□ -1.65
HMGB4Q8WW32 CBX1P1-201ENST00000440184 427 ntBASIC4.76□□□□□ -1.65
HMGB4Q8WW32 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.76□□□□□ -1.65
HMGB4Q8WW32 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.76□□□□□ -1.65
HMGB4Q8WW32 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.76□□□□□ -1.65
HMGB4Q8WW32 FTH1P24-201ENST00000503502 462 ntBASIC4.76□□□□□ -1.65
HMGB4Q8WW32 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC4.76□□□□□ -1.65
HMGB4Q8WW32 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HMGB4Q8WW32 SOD1P3-201ENST00000518682 454 ntBASIC4.76□□□□□ -1.65
HMGB4Q8WW32 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.76□□□□□ -1.65
HMGB4Q8WW32 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.76□□□□□ -1.65
HMGB4Q8WW32 AP001189.2-201ENST00000527320 189 ntBASIC4.76□□□□□ -1.65
HMGB4Q8WW32 AC079171.1-201ENST00000568788 914 ntBASIC4.76□□□□□ -1.65
HMGB4Q8WW32 OR4K7P-201ENST00000580232 945 ntBASIC4.76□□□□□ -1.65
HMGB4Q8WW32 AC022069.1-201ENST00000582910 658 ntBASIC4.76□□□□□ -1.65
HMGB4Q8WW32 AC009220.3-201ENST00000604318 586 ntBASIC4.76□□□□□ -1.65
HMGB4Q8WW32 AC018638.7-201ENST00000605836 1114 ntBASIC4.76□□□□□ -1.65
HMGB4Q8WW32 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC4.76□□□□□ -1.65
HMGB4Q8WW32 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.76□□□□□ -1.65
HMGB4Q8WW32 AC092653.1-201ENST00000608509 531 ntBASIC4.76□□□□□ -1.65
HMGB4Q8WW32 AC131235.4-201ENST00000609288 620 ntBASIC4.76□□□□□ -1.65
HMGB4Q8WW32 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HMGB4Q8WW32 AC068831.8-201ENST00000620171 435 ntBASIC4.76□□□□□ -1.65
HMGB4Q8WW32 AC078883.4-201ENST00000623218 367 ntBASIC4.76□□□□□ -1.65
HMGB4Q8WW32 XPOTP1-201ENST00000443317 2398 ntBASIC4.76□□□□□ -1.65
HMGB4Q8WW32 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
HMGB4Q8WW32 AL451142.2-201ENST00000429076 2090 ntBASIC4.76□□□□□ -1.65
HMGB4Q8WW32 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HMGB4Q8WW32 AL022322.2-201ENST00000624072 20397 ntBASIC4.76□□□□□ -1.65
HMGB4Q8WW32 AC004817.4-201ENST00000602396 3625 ntBASIC4.76□□□□□ -1.65
HMGB4Q8WW32 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
HMGB4Q8WW32 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HMGB4Q8WW32 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
HMGB4Q8WW32 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HMGB4Q8WW32 AL031119.1-201ENST00000404707 1879 ntBASIC4.75□□□□□ -1.65
HMGB4Q8WW32 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC4.75□□□□□ -1.65
HMGB4Q8WW32 AC011447.7-201ENST00000624228 1590 ntBASIC4.75□□□□□ -1.65
HMGB4Q8WW32 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.75□□□□□ -1.65
HMGB4Q8WW32 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HMGB4Q8WW32 RNU6-621P-201ENST00000364752 109 ntBASIC4.75□□□□□ -1.65
HMGB4Q8WW32 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.75□□□□□ -1.65
HMGB4Q8WW32 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HMGB4Q8WW32 SNORD116-8-201ENST00000384365 95 ntBASIC4.75□□□□□ -1.65
HMGB4Q8WW32 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
HMGB4Q8WW32 CASP3-203ENST00000393588 677 ntTSL 4 BASIC4.75□□□□□ -1.65
HMGB4Q8WW32 TAF9BP1-201ENST00000396646 746 ntBASIC4.75□□□□□ -1.65
HMGB4Q8WW32 EI24P3-201ENST00000399046 1062 ntBASIC4.75□□□□□ -1.65
HMGB4Q8WW32 AL078604.1-201ENST00000404609 466 ntBASIC4.75□□□□□ -1.65
HMGB4Q8WW32 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC4.75□□□□□ -1.65
HMGB4Q8WW32 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HMGB4Q8WW32 AC008280.1-201ENST00000418851 412 ntBASIC4.75□□□□□ -1.65
HMGB4Q8WW32 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC4.75□□□□□ -1.65
HMGB4Q8WW32 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.75□□□□□ -1.65
HMGB4Q8WW32 RPP40P1-201ENST00000426762 456 ntBASIC4.75□□□□□ -1.65
HMGB4Q8WW32 AC004975.1-201ENST00000428733 208 ntBASIC4.75□□□□□ -1.65
HMGB4Q8WW32 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.75□□□□□ -1.65
HMGB4Q8WW32 AL513175.1-201ENST00000431492 780 ntBASIC4.75□□□□□ -1.65
HMGB4Q8WW32 AL050321.1-201ENST00000432363 400 ntBASIC4.75□□□□□ -1.65
HMGB4Q8WW32 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
HMGB4Q8WW32 CEACAMP1-201ENST00000434624 1035 ntBASIC4.75□□□□□ -1.65
HMGB4Q8WW32 YWHAZP8-201ENST00000436935 731 ntBASIC4.75□□□□□ -1.65
HMGB4Q8WW32 RPL12P18-201ENST00000437175 325 ntBASIC4.75□□□□□ -1.65
HMGB4Q8WW32 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.75□□□□□ -1.65
HMGB4Q8WW32 GEMIN8P3-201ENST00000445417 720 ntBASIC4.75□□□□□ -1.65
HMGB4Q8WW32 NDUFA5P7-201ENST00000452914 242 ntBASIC4.75□□□□□ -1.65
HMGB4Q8WW32 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC4.75□□□□□ -1.65
HMGB4Q8WW32 AC011276.1-201ENST00000469688 323 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 164 ms