Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 AC015911.5-201ENST00000587076 451 ntBASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 CD36-221ENST00000534394 1741 ntTSL 2 BASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 HSPA8P1-201ENST00000425843 1833 ntBASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 GCNT6-201ENST00000379591 934 ntBASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 RPL5P18-201ENST00000406671 891 ntBASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 AC004552.1-201ENST00000419089 348 ntBASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 VN1R40P-201ENST00000455196 941 ntBASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 RPS26P3-201ENST00000470205 348 ntBASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 AC090543.2-201ENST00000483963 348 ntBASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 AC004057.1-201ENST00000485827 348 ntBASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 AC131238.1-201ENST00000617135 328 ntBASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 MFSD8-233ENST00000641482 4860 ntBASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 RNA5SP197-201ENST00000363357 119 ntBASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 SNORA44-201ENST00000384584 132 ntBASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 MTHFD2P2-201ENST00000407725 247 ntBASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 RN7SKP53-201ENST00000411337 315 ntBASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 IGKV2-26-201ENST00000518305 343 ntBASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 TRAV15-201ENST00000556680 249 ntBASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 TUG1_1.1-201ENST00000610654 145 ntBASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 A2MP1-204ENST00000566278 4130 ntBASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 SRP72P2-201ENST00000344851 1979 ntBASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 AC007685.1-201ENST00000329806 452 ntBASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 AC091544.1-201ENST00000484702 348 ntBASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 AP003355.3-201ENST00000623465 114 ntBASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
ALMS1Q8TCU4 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
ALMS1Q8TCU4 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC2.41□□□□□ -2.02
ALMS1Q8TCU4 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
ALMS1Q8TCU4 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
ALMS1Q8TCU4 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
ALMS1Q8TCU4 AL022311.1-201ENST00000623726 19416 ntBASIC2.41□□□□□ -2.02
ALMS1Q8TCU4 AC011742.1-201ENST00000431448 434 ntBASIC2.41□□□□□ -2.02
ALMS1Q8TCU4 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC2.41□□□□□ -2.02
ALMS1Q8TCU4 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC2.41□□□□□ -2.02
ALMS1Q8TCU4 RPL5P23-201ENST00000496040 868 ntBASIC2.41□□□□□ -2.02
ALMS1Q8TCU4 VN1R104P-201ENST00000505115 1009 ntBASIC2.41□□□□□ -2.02
ALMS1Q8TCU4 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC2.41□□□□□ -2.02
ALMS1Q8TCU4 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC2.41□□□□□ -2.02
ALMS1Q8TCU4 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC2.41□□□□□ -2.02
ALMS1Q8TCU4 IGKV2OR2-8-201ENST00000558710 300 ntBASIC2.41□□□□□ -2.02
ALMS1Q8TCU4 AL359715.5-201ENST00000623431 443 ntBASIC2.41□□□□□ -2.02
ALMS1Q8TCU4 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
ALMS1Q8TCU4 AC093311.1-201ENST00000506586 2021 ntBASIC2.41□□□□□ -2.02
ALMS1Q8TCU4 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
ALMS1Q8TCU4 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC2.41□□□□□ -2.02
ALMS1Q8TCU4 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
ALMS1Q8TCU4 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC2.41□□□□□ -2.02
ALMS1Q8TCU4 RPS26P40-201ENST00000435209 294 ntBASIC2.41□□□□□ -2.02
ALMS1Q8TCU4 RPL23AP89-201ENST00000439324 255 ntBASIC2.41□□□□□ -2.02
ALMS1Q8TCU4 AC000041.1-201ENST00000439655 175 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 132.6 ms