Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 RN7SKP269-201ENST00000365545 319 ntBASIC4.78□□□□□ -1.64
CPEB3Q8NE35 SNORA16A-201ENST00000384342 137 ntBASIC4.78□□□□□ -1.64
CPEB3Q8NE35 MIR323B-201ENST00000385269 82 ntBASIC4.78□□□□□ -1.64
CPEB3Q8NE35 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CPEB3Q8NE35 AC025750.1-201ENST00000399891 379 ntBASIC4.78□□□□□ -1.64
CPEB3Q8NE35 MIR1277-201ENST00000408536 78 ntBASIC4.78□□□□□ -1.64
CPEB3Q8NE35 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC4.78□□□□□ -1.64
CPEB3Q8NE35 HMGB1P11-201ENST00000413899 637 ntBASIC4.78□□□□□ -1.64
CPEB3Q8NE35 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC4.78□□□□□ -1.64
CPEB3Q8NE35 USP9YP13-201ENST00000417797 480 ntBASIC4.78□□□□□ -1.64
CPEB3Q8NE35 B3GALNT1P1-201ENST00000420569 975 ntBASIC4.78□□□□□ -1.64
CPEB3Q8NE35 AL356583.2-201ENST00000426536 280 ntBASIC4.78□□□□□ -1.64
CPEB3Q8NE35 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.78□□□□□ -1.64
CPEB3Q8NE35 MTND3P23-201ENST00000431980 347 ntBASIC4.78□□□□□ -1.64
CPEB3Q8NE35 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC4.78□□□□□ -1.64
CPEB3Q8NE35 NDUFB4P8-201ENST00000435351 367 ntBASIC4.78□□□□□ -1.64
CPEB3Q8NE35 AC012075.1-201ENST00000436549 580 ntBASIC4.78□□□□□ -1.64
CPEB3Q8NE35 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC4.78□□□□□ -1.64
CPEB3Q8NE35 AC073465.2-201ENST00000440938 498 ntBASIC4.78□□□□□ -1.64
CPEB3Q8NE35 AC112653.1-201ENST00000443851 386 ntBASIC4.78□□□□□ -1.64
CPEB3Q8NE35 Z99127.3-201ENST00000448158 395 ntBASIC4.78□□□□□ -1.64
CPEB3Q8NE35 MTND5P20-201ENST00000448677 143 ntBASIC4.78□□□□□ -1.64
CPEB3Q8NE35 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CPEB3Q8NE35 AL033528.1-201ENST00000453780 140 ntBASIC4.78□□□□□ -1.64
CPEB3Q8NE35 AC023141.9-201ENST00000458734 412 ntBASIC4.78□□□□□ -1.64
CPEB3Q8NE35 RN7SL515P-201ENST00000463999 297 ntBASIC4.78□□□□□ -1.64
CPEB3Q8NE35 AC091564.1-201ENST00000464563 479 ntBASIC4.78□□□□□ -1.64
CPEB3Q8NE35 AL672167.3-201ENST00000465951 960 ntBASIC4.78□□□□□ -1.64
CPEB3Q8NE35 RN7SL51P-201ENST00000468230 285 ntBASIC4.78□□□□□ -1.64
CPEB3Q8NE35 AC090638.1-201ENST00000498296 909 ntBASIC4.78□□□□□ -1.64
CPEB3Q8NE35 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC4.78□□□□□ -1.64
CPEB3Q8NE35 MTCYBP17-201ENST00000503579 789 ntBASIC4.78□□□□□ -1.64
CPEB3Q8NE35 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC4.78□□□□□ -1.64
CPEB3Q8NE35 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CPEB3Q8NE35 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC4.78□□□□□ -1.64
CPEB3Q8NE35 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC4.78□□□□□ -1.64
CPEB3Q8NE35 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CPEB3Q8NE35 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC4.78□□□□□ -1.64
CPEB3Q8NE35 RN7SKP99-201ENST00000517028 307 ntBASIC4.78□□□□□ -1.64
CPEB3Q8NE35 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
CPEB3Q8NE35 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC4.78□□□□□ -1.64
CPEB3Q8NE35 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4.78□□□□□ -1.64
CPEB3Q8NE35 OR5M7P-201ENST00000526140 972 ntBASIC4.78□□□□□ -1.64
CPEB3Q8NE35 AP001646.1-201ENST00000527936 915 ntBASIC4.78□□□□□ -1.64
CPEB3Q8NE35 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.78□□□□□ -1.64
CPEB3Q8NE35 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC4.78□□□□□ -1.64
CPEB3Q8NE35 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.78□□□□□ -1.64
CPEB3Q8NE35 AC122134.1-201ENST00000565664 1104 ntBASIC4.78□□□□□ -1.64
CPEB3Q8NE35 AC093519.1-201ENST00000566109 298 ntBASIC4.78□□□□□ -1.64
CPEB3Q8NE35 SNORD95-201ENST00000579879 68 ntBASIC4.78□□□□□ -1.64
CPEB3Q8NE35 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC4.78□□□□□ -1.64
CPEB3Q8NE35 VN1R79P-201ENST00000593540 513 ntBASIC4.78□□□□□ -1.64
CPEB3Q8NE35 AC115286.1-201ENST00000604298 434 ntBASIC4.78□□□□□ -1.64
CPEB3Q8NE35 AL139124.1-201ENST00000609123 421 ntBASIC4.78□□□□□ -1.64
CPEB3Q8NE35 AC131902.3-201ENST00000611767 581 ntBASIC4.78□□□□□ -1.64
CPEB3Q8NE35 HOTTIP_3.1-201ENST00000619957 337 ntBASIC4.78□□□□□ -1.64
CPEB3Q8NE35 AC026634.1-201ENST00000634369 198 ntBASIC4.78□□□□□ -1.64
CPEB3Q8NE35 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC4.78□□□□□ -1.64
CPEB3Q8NE35 AC073869.8-201ENST00000641806 335 ntBASIC4.78□□□□□ -1.64
CPEB3Q8NE35 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CPEB3Q8NE35 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CPEB3Q8NE35 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
CPEB3Q8NE35 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CPEB3Q8NE35 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CPEB3Q8NE35 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CPEB3Q8NE35 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CPEB3Q8NE35 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC4.78□□□□□ -1.64
CPEB3Q8NE35 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC4.77□□□□□ -1.65
CPEB3Q8NE35 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CPEB3Q8NE35 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CPEB3Q8NE35 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
CPEB3Q8NE35 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CPEB3Q8NE35 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.77□□□□□ -1.65
CPEB3Q8NE35 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.77□□□□□ -1.65
CPEB3Q8NE35 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4.77□□□□□ -1.65
CPEB3Q8NE35 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.77□□□□□ -1.65
CPEB3Q8NE35 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
CPEB3Q8NE35 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CPEB3Q8NE35 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
CPEB3Q8NE35 Y_RNA.70-201ENST00000362886 110 ntBASIC4.77□□□□□ -1.65
CPEB3Q8NE35 RN7SKP124-201ENST00000364730 341 ntBASIC4.77□□□□□ -1.65
CPEB3Q8NE35 Y_RNA.450-201ENST00000384198 113 ntBASIC4.77□□□□□ -1.65
CPEB3Q8NE35 SNORA51.12-201ENST00000384448 134 ntBASIC4.77□□□□□ -1.65
CPEB3Q8NE35 RNU6-1122P-201ENST00000384449 107 ntBASIC4.77□□□□□ -1.65
CPEB3Q8NE35 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CPEB3Q8NE35 RPS24P12-201ENST00000402084 394 ntBASIC4.77□□□□□ -1.65
CPEB3Q8NE35 AL512422.1-201ENST00000407033 553 ntBASIC4.77□□□□□ -1.65
CPEB3Q8NE35 AL133482.1-201ENST00000415988 498 ntBASIC4.77□□□□□ -1.65
CPEB3Q8NE35 AC016831.2-201ENST00000417179 352 ntBASIC4.77□□□□□ -1.65
CPEB3Q8NE35 TMBIM7P-201ENST00000418074 855 ntBASIC4.77□□□□□ -1.65
CPEB3Q8NE35 MTCYBP24-201ENST00000420387 1106 ntBASIC4.77□□□□□ -1.65
CPEB3Q8NE35 MTCO3P1-205ENST00000422088 832 ntBASIC4.77□□□□□ -1.65
CPEB3Q8NE35 TRIM60P10Y-201ENST00000425589 751 ntBASIC4.77□□□□□ -1.65
CPEB3Q8NE35 NIPA2P1-201ENST00000426223 976 ntBASIC4.77□□□□□ -1.65
CPEB3Q8NE35 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.77□□□□□ -1.65
CPEB3Q8NE35 TRIM60P8Y-201ENST00000436338 762 ntBASIC4.77□□□□□ -1.65
CPEB3Q8NE35 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC4.77□□□□□ -1.65
CPEB3Q8NE35 AC092427.1-201ENST00000439177 601 ntBASIC4.77□□□□□ -1.65
CPEB3Q8NE35 MTCO3P18-201ENST00000440206 761 ntBASIC4.77□□□□□ -1.65
CPEB3Q8NE35 AL133244.1-201ENST00000456007 258 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms